RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 AAASQ9NRG9 546 aa8.73□□□□□ -1.01
PTP4A1P3-201ENST00000433661 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
PTP4A1P3-201ENST00000433661 NUDT16Q96DE0 195 aaKnown RBP8.72□□□□□ -1.01
PTP4A1P3-201ENST00000433661 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
PTP4A1P3-201ENST00000433661 HSH2DQ96JZ2 352 aa8.72□□□□□ -1.01
PTP4A1P3-201ENST00000433661 BCL11AQ9H165 835 aa8.72□□□□□ -1.01
PTP4A1P3-201ENST00000433661 EPB42P16452 691 aa8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 MRPL58Q14197 206 aaKnown RBP8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 ALG1LQ6GMV1 187 aa8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 GPR152Q8TDT2 470 aa8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 KIFC2Q96AC6 838 aa8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 FNDC3AQ9Y2H6 1198 aaKnown RBP8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 KCNMB2Q9Y691 235 aa8.71□□□□□ -1.02
PTP4A1P3-201ENST00000433661 FAM157BP0CG42 384 aa8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 RHOQP17081 205 aa8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 ARSJQ5FYB0 599 aaPredicted RBP8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 EFCC1Q9HA90 598 aa8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 RTCBQ9Y3I0 505 aaKnown RBP8.7□□□□□ -1.02
PTP4A1P3-201ENST00000433661 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 EFSO43281 561 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 FIGNL1Q6PIW4 674 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 LRRC69Q6ZNQ3 347 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TMC1Q8TDI8 760 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 NEUROD4Q9HD90 331 aa8.69□□□□□ -1.02
PTP4A1P3-201ENST00000433661 FIGNL2A6NMB9 653 aa8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 LDHBP07195 334 aaKnown RBP8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 PGBD3Q8N328 593 aa8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 CSRNP1Q96S65 589 aa8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 NIF3L1Q9GZT8 377 aa8.68□□□□□ -1.02
PTP4A1P3-201ENST00000433661 ATP2B2Q01814 1243 aa8.67□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TAGLNQ01995 201 aaKnown RBP8.67□□□□□ -1.02
PTP4A1P3-201ENST00000433661 EFHC2Q5JST6 749 aa8.67□□□□□ -1.02
PTP4A1P3-201ENST00000433661 MAN1A2O60476 641 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 THBS1P07996 1170 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 DAB2P98082 770 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TTC16Q8NEE8 873 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 CFHR5Q9BXR6 569 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 NDFIP2Q9NV92 336 aa8.66□□□□□ -1.02
PTP4A1P3-201ENST00000433661 H7C1W4 665 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 EIF1AYO14602 144 aaKnown RBP8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TNFRSF21O75509 655 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 RECKO95980 971 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 PTSQ03393 145 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 RUBCNLQ9H714 662 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
PTP4A1P3-201ENST00000433661 PNMA6FA0A0J9YX94 578 aa8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 CPNE3O75131 537 aaKnown RBP8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 MAPK8P45983 427 aa8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 CEP63Q96MT8 703 aa8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ZCCHC2Q9C0B9 1178 aaKnown RBP8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 BRD7Q9NPI1 651 aa8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GJA3Q9Y6H8 435 aa8.64□□□□□ -1.03
PTP4A1P3-201ENST00000433661 UBAP1LF5GYI3 381 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GIPC1O14908 333 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ST8SIA5O15466 376 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GNA15P30679 374 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 NLRP13Q86W25 1043 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ELP3Q9H9T3 547 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ATXN7O15265 892 aaPredicted RBP8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 VEGFBP49765 207 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 TNP2Q05952 138 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 C8orf34Q49A92 452 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 FAM182BQ5T319 152 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 LDLRAD1Q5T700 205 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ZNF438Q7Z4V0 828 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 PMEPA1Q969W9 287 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 DUSP9Q99956 384 aaKnown RBP8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ZFYVE28Q9HCC9 887 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
PTP4A1P3-201ENST00000433661 POTECB2RU33 542 aa8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 XYLBO75191 536 aa8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 TCF3P15923 654 aa8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ORC1Q13415 861 aa8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 CMTR1Q8N1G2 835 aaKnown RBP8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GAS2L1Q99501 681 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 NUCKS1Q9H1E3 243 aaKnown RBP8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
PTP4A1P3-201ENST00000433661 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GSX2Q9BZM3 304 aa8.6□□□□□ -1.03
PTP4A1P3-201ENST00000433661 CHRDQ9H2X0 955 aa8.6□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1P3-201ENST00000433661 WWC3Q9ULE0 1092 aa8.6□□□□□ -1.03
PTP4A1P3-201ENST00000433661 A6NHS1 94 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 SORBS3O60504 671 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms