RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 SLC10A5Q5PT55 438 aa21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 CC2D2BQ6DHV5 1058 aa21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 COPS6Q7L5N1 327 aa21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 NECTIN2Q92692 538 aa21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 RBM17Q96I25 401 aaKnown RBP21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
AC055876.3-201ENST00000431496 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 KRT24Q2M2I5 525 aa21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 IFFO2Q5TF58 517 aa21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 JMYQ8N9B5 988 aa21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 L3MBTL3Q96JM7 780 aaPredicted RBP21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 CRAMP1Q96RY5 1269 aa21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 PSMD1Q99460 953 aa21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 UTP14AQ9BVJ6 771 aaKnown RBP21.14■□□□□ 0.97
AC055876.3-201ENST00000431496 IQCA1LA6NCM1 817 aa21.13■□□□□ 0.97
AC055876.3-201ENST00000431496 AIMP1Q12904 312 aaKnown RBP21.13■□□□□ 0.97
AC055876.3-201ENST00000431496 CHADLQ6NUI6 762 aa21.13■□□□□ 0.97
AC055876.3-201ENST00000431496 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
AC055876.3-201ENST00000431496 XAGE3Q8WTP9 111 aa21.13■□□□□ 0.97
AC055876.3-201ENST00000431496 DDX21Q9NR30 783 aaKnown RBP eCLIP21.13■□□□□ 0.97
AC055876.3-201ENST00000431496 GRIPAP1Q4V328 841 aa21.12■□□□□ 0.97
AC055876.3-201ENST00000431496 NLRP3Q96P20 1036 aa21.12■□□□□ 0.97
AC055876.3-201ENST00000431496 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
AC055876.3-201ENST00000431496 ZNF541Q9H0D2 1346 aa21.11■□□□□ 0.97
AC055876.3-201ENST00000431496 FZD9O00144 591 aa21.11■□□□□ 0.97
AC055876.3-201ENST00000431496 POTEIP0CG38 1075 aa21.11■□□□□ 0.97
AC055876.3-201ENST00000431496 POTEJP0CG39 1038 aa21.11■□□□□ 0.97
AC055876.3-201ENST00000431496 HSP90AB3PQ58FF7 597 aa21.11■□□□□ 0.97
AC055876.3-201ENST00000431496 TCIRG1Q13488 830 aa21.1■□□□□ 0.97
AC055876.3-201ENST00000431496 CFAP44Q96MT7 982 aa21.1■□□□□ 0.97
AC055876.3-201ENST00000431496 TAF1DQ9H5J8 278 aaPredicted RBP21.1■□□□□ 0.97
AC055876.3-201ENST00000431496 HOXB7P09629 217 aa21.09■□□□□ 0.97
AC055876.3-201ENST00000431496 NLRP10Q86W26 655 aa21.09■□□□□ 0.97
AC055876.3-201ENST00000431496 JDP2Q8WYK2 163 aa21.09■□□□□ 0.97
AC055876.3-201ENST00000431496 RNF123Q5XPI4 1314 aa21.08■□□□□ 0.97
AC055876.3-201ENST00000431496 TCERG1O14776 1098 aaKnown RBP21.08■□□□□ 0.97
AC055876.3-201ENST00000431496 PPEF1O14829 653 aaPredicted RBP21.08■□□□□ 0.97
AC055876.3-201ENST00000431496 CHPF2Q9P2E5 772 aa21.08■□□□□ 0.97
AC055876.3-201ENST00000431496 PCNTO95613 3336 aa21.07■□□□□ 0.96
AC055876.3-201ENST00000431496 HDGFL1Q5TGJ6 251 aa21.07■□□□□ 0.96
AC055876.3-201ENST00000431496 LDHDQ86WU2 507 aa21.07■□□□□ 0.96
AC055876.3-201ENST00000431496 HACL1Q9UJ83 578 aa21.07■□□□□ 0.96
AC055876.3-201ENST00000431496 HCLS1P14317 486 aaPredicted RBP21.06■□□□□ 0.96
AC055876.3-201ENST00000431496 SLC51AQ86UW1 340 aa21.06■□□□□ 0.96
AC055876.3-201ENST00000431496 GPC2Q8N158 579 aa21.06■□□□□ 0.96
AC055876.3-201ENST00000431496 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
AC055876.3-201ENST00000431496 ATP6V0A2Q9Y487 856 aa21.06■□□□□ 0.96
AC055876.3-201ENST00000431496 SCN4AP35499 1836 aa21.06■□□□□ 0.96
AC055876.3-201ENST00000431496 APAF1O14727 1248 aa21.05■□□□□ 0.96
AC055876.3-201ENST00000431496 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
AC055876.3-201ENST00000431496 PLBD2Q8NHP8 589 aa21.05■□□□□ 0.96
AC055876.3-201ENST00000431496 TMX4Q9H1E5 349 aaPredicted RBP21.05■□□□□ 0.96
AC055876.3-201ENST00000431496 DBF4Q9UBU7 674 aaPredicted RBP21.05■□□□□ 0.96
AC055876.3-201ENST00000431496 BBOX1O75936 387 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 ZNF853P0CG23 659 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 EPHX2P34913 555 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 EIF6P56537 245 aaKnown RBP21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 ANKRD13DQ6ZTN6 518 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 LARGE2Q8N3Y3 721 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 MBIPQ9NS73 344 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
AC055876.3-201ENST00000431496 EAPPQ56P03 285 aaPredicted RBP21.03■□□□□ 0.96
AC055876.3-201ENST00000431496 PNMA8AQ86V59 439 aaPredicted RBP21.03■□□□□ 0.96
AC055876.3-201ENST00000431496 CREBZFQ9NS37 354 aa21.03■□□□□ 0.96
AC055876.3-201ENST00000431496 HYPKQ9NX55 129 aa21.03■□□□□ 0.96
AC055876.3-201ENST00000431496 ABCC4O15439 1325 aa21.03■□□□□ 0.96
AC055876.3-201ENST00000431496 SP8Q8IXZ3 490 aa21.02■□□□□ 0.96
AC055876.3-201ENST00000431496 VPS33BQ9H267 617 aa21.02■□□□□ 0.96
AC055876.3-201ENST00000431496 PASKQ96RG2 1323 aa21.02■□□□□ 0.95
AC055876.3-201ENST00000431496 ITGBL1O95965 494 aaPredicted RBP21.01■□□□□ 0.95
AC055876.3-201ENST00000431496 ISCA1Q9BUE6 129 aa21.01■□□□□ 0.95
AC055876.3-201ENST00000431496 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
AC055876.3-201ENST00000431496 CLEC11AQ9Y240 323 aa21.01■□□□□ 0.95
AC055876.3-201ENST00000431496 GJA3Q9Y6H8 435 aa21.01■□□□□ 0.95
AC055876.3-201ENST00000431496 COL4A5P29400 1685 aa21.01■□□□□ 0.95
AC055876.3-201ENST00000431496 GNAI1P63096 354 aa21■□□□□ 0.95
AC055876.3-201ENST00000431496 CALD1Q05682 793 aaKnown RBP21■□□□□ 0.95
AC055876.3-201ENST00000431496 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
AC055876.3-201ENST00000431496 RTFDC1Q9BY42 306 aaPredicted RBP21■□□□□ 0.95
AC055876.3-201ENST00000431496 PPIP5K2O43314 1243 aa20.99■□□□□ 0.95
AC055876.3-201ENST00000431496 NIM1KQ8IY84 436 aa20.99■□□□□ 0.95
AC055876.3-201ENST00000431496 SUPT20HQ8NEM7 779 aa20.99■□□□□ 0.95
AC055876.3-201ENST00000431496 ZNF428Q96B54 188 aa20.99■□□□□ 0.95
AC055876.3-201ENST00000431496 ANKRD36CQ5JPF3 1778 aa20.99■□□□□ 0.95
AC055876.3-201ENST00000431496 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
AC055876.3-201ENST00000431496 TRIM28Q13263 835 aaKnown RBP20.98■□□□□ 0.95
AC055876.3-201ENST00000431496 GRAPQ13588 217 aa20.98■□□□□ 0.95
AC055876.3-201ENST00000431496 AOC3Q16853 763 aa20.98■□□□□ 0.95
AC055876.3-201ENST00000431496 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
AC055876.3-201ENST00000431496 ELL2O00472 640 aaPredicted RBP20.97■□□□□ 0.95
AC055876.3-201ENST00000431496 DPP8Q6V1X1 898 aaPredicted RBP20.97■□□□□ 0.95
AC055876.3-201ENST00000431496 CNTROBQ8N137 903 aa20.97■□□□□ 0.95
AC055876.3-201ENST00000431496 MPNDQ8N594 471 aa20.97■□□□□ 0.95
AC055876.3-201ENST00000431496 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
AC055876.3-201ENST00000431496 MKRN1Q9UHC7 482 aaKnown RBP20.97■□□□□ 0.95
AC055876.3-201ENST00000431496 LMOD1P29536 600 aaPredicted RBP20.96■□□□□ 0.95
AC055876.3-201ENST00000431496 MAP1SQ66K74 1059 aaPredicted RBP20.96■□□□□ 0.95
AC055876.3-201ENST00000431496 ZNRF3Q9ULT6 936 aa20.96■□□□□ 0.95
AC055876.3-201ENST00000431496 TMEM88BA6NKF7 163 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms