RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ADARB2-AS1A8MUL3 147 aa9.87□□□□□ -0.83
PTPN4-204ENST00000431283 EPB42P16452 691 aa9.87□□□□□ -0.83
PTPN4-204ENST00000431283 CDCA8Q53HL2 280 aa9.87□□□□□ -0.83
PTPN4-204ENST00000431283 CFAP70Q5T0N1 1121 aa9.87□□□□□ -0.83
PTPN4-204ENST00000431283 BHMTQ93088 406 aa9.87□□□□□ -0.83
PTPN4-204ENST00000431283 PNMA5Q96PV4 448 aa9.87□□□□□ -0.83
PTPN4-204ENST00000431283 TBC1D8BQ0IIM8 1120 aa9.86□□□□□ -0.83
PTPN4-204ENST00000431283 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
PTPN4-204ENST00000431283 TGFBR3LH3BV60 316 aa9.85□□□□□ -0.83
PTPN4-204ENST00000431283 FOXO3O43524 673 aa9.85□□□□□ -0.83
PTPN4-204ENST00000431283 ADH7P40394 386 aa9.85□□□□□ -0.83
PTPN4-204ENST00000431283 IER5Q5VY09 327 aa9.85□□□□□ -0.83
PTPN4-204ENST00000431283 TNFRSF25Q93038 417 aa9.85□□□□□ -0.83
PTPN4-204ENST00000431283 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
PTPN4-204ENST00000431283 ARXQ96QS3 562 aa9.84□□□□□ -0.83
PTPN4-204ENST00000431283 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
PTPN4-204ENST00000431283 UBE2OQ9C0C9 1292 aaKnown RBP9.84□□□□□ -0.83
PTPN4-204ENST00000431283 EFCC1Q9HA90 598 aa9.84□□□□□ -0.83
PTPN4-204ENST00000431283 M0R082 166 aa9.83□□□□□ -0.84
PTPN4-204ENST00000431283 PRRT3Q5FWE3 981 aa9.83□□□□□ -0.84
PTPN4-204ENST00000431283 ZNF417Q8TAU3 575 aa9.83□□□□□ -0.84
PTPN4-204ENST00000431283 ZNF587Q96SQ5 575 aaPredicted RBP9.83□□□□□ -0.84
PTPN4-204ENST00000431283 NOVA2Q9UNW9 492 aaKnown RBP9.83□□□□□ -0.84
PTPN4-204ENST00000431283 WEE1P30291 646 aa9.82□□□□□ -0.84
PTPN4-204ENST00000431283 PROCP04070 461 aa9.81□□□□□ -0.84
PTPN4-204ENST00000431283 SPATA31C1P0DKV0 1188 aa9.81□□□□□ -0.84
PTPN4-204ENST00000431283 DGKZQ13574 1117 aa9.81□□□□□ -0.84
PTPN4-204ENST00000431283 KLK14Q9P0G3 267 aa9.81□□□□□ -0.84
PTPN4-204ENST00000431283 ITGB2P05107 769 aa9.8□□□□□ -0.84
PTPN4-204ENST00000431283 CCINQ13939 588 aa9.8□□□□□ -0.84
PTPN4-204ENST00000431283 TRIM11Q96F44 468 aa9.8□□□□□ -0.84
PTPN4-204ENST00000431283 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.8□□□□□ -0.84
PTPN4-204ENST00000431283 MDFIQ99750 246 aa9.79□□□□□ -0.84
PTPN4-204ENST00000431283 C1QTNF9BB2RNN3 333 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 LILRB5O75023 590 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 IDH3AP50213 366 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 ARSDP51689 593 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 SWI5Q1ZZU3 235 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 C11orf91Q3C1V1 193 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 MICALL1Q8N3F8 863 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
PTPN4-204ENST00000431283 ZMYND15Q9H091 742 aa9.78□□□□□ -0.84
PTPN4-204ENST00000431283 ACIN1Q9UKV3 1341 aaKnown RBP9.78□□□□□ -0.84
PTPN4-204ENST00000431283 APBA3O96018 575 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 ALBP02768 609 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 NFKB1P19838 968 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 PCSK7Q16549 785 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 GSX2Q9BZM3 304 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 QTRT2Q9H974 415 aaKnown RBP9.77□□□□□ -0.85
PTPN4-204ENST00000431283 PRDM6Q9NQX0 595 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 BCS1LQ9Y276 419 aa9.77□□□□□ -0.85
PTPN4-204ENST00000431283 BAG6P46379 1132 aa9.76□□□□□ -0.85
PTPN4-204ENST00000431283 TRIM28Q13263 835 aaKnown RBP9.76□□□□□ -0.85
PTPN4-204ENST00000431283 CD163Q86VB7 1156 aa9.76□□□□□ -0.85
PTPN4-204ENST00000431283 SLC6A14Q9UN76 642 aa9.76□□□□□ -0.85
PTPN4-204ENST00000431283 STARD13Q9Y3M8 1113 aa9.76□□□□□ -0.85
PTPN4-204ENST00000431283 PRMT3O60678 531 aa9.75□□□□□ -0.85
PTPN4-204ENST00000431283 MICAL2O94851 1124 aa9.75□□□□□ -0.85
PTPN4-204ENST00000431283 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
PTPN4-204ENST00000431283 IFT43Q96FT9 208 aa9.75□□□□□ -0.85
PTPN4-204ENST00000431283 MYO19Q96H55 970 aa9.75□□□□□ -0.85
PTPN4-204ENST00000431283 PRIMPOLQ96LW4 560 aa9.75□□□□□ -0.85
PTPN4-204ENST00000431283 JPH1Q9HDC5 661 aaPredicted RBP9.75□□□□□ -0.85
PTPN4-204ENST00000431283 DNAJB12Q9NXW2 375 aaKnown RBP9.75□□□□□ -0.85
PTPN4-204ENST00000431283 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
PTPN4-204ENST00000431283 INPP5BP32019 993 aa9.74□□□□□ -0.85
PTPN4-204ENST00000431283 ELOAQ14241 798 aaKnown RBP9.74□□□□□ -0.85
PTPN4-204ENST00000431283 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
PTPN4-204ENST00000431283 KRT25Q7Z3Z0 450 aa9.74□□□□□ -0.85
PTPN4-204ENST00000431283 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.73□□□□□ -0.85
PTPN4-204ENST00000431283 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
PTPN4-204ENST00000431283 CHRNA4P43681 627 aa9.73□□□□□ -0.85
PTPN4-204ENST00000431283 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
PTPN4-204ENST00000431283 NACC1Q96RE7 527 aa9.73□□□□□ -0.85
PTPN4-204ENST00000431283 C11orf16Q9NQ32 467 aa9.73□□□□□ -0.85
PTPN4-204ENST00000431283 ADAM23O75077 832 aa9.72□□□□□ -0.85
PTPN4-204ENST00000431283 RGS9O75916 674 aaPredicted RBP9.72□□□□□ -0.85
PTPN4-204ENST00000431283 FKBP5Q13451 457 aaPredicted RBP9.72□□□□□ -0.85
PTPN4-204ENST00000431283 NUDT8Q8WV74 236 aa9.72□□□□□ -0.85
PTPN4-204ENST00000431283 RARAP10276 462 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 GATA4P43694 442 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 RAC1P63000 192 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 PSAPL1Q6NUJ1 521 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 SERPINA10Q9UK55 444 aa9.71□□□□□ -0.86
PTPN4-204ENST00000431283 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
PTPN4-204ENST00000431283 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
PTPN4-204ENST00000431283 FURINP09958 794 aa9.7□□□□□ -0.86
PTPN4-204ENST00000431283 TREML1Q86YW5 311 aa9.7□□□□□ -0.86
PTPN4-204ENST00000431283 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
PTPN4-204ENST00000431283 ZMIZ1Q9ULJ6 1067 aa9.7□□□□□ -0.86
PTPN4-204ENST00000431283 RTCBQ9Y3I0 505 aaKnown RBP9.7□□□□□ -0.86
PTPN4-204ENST00000431283 ATG7O95352 703 aa9.69□□□□□ -0.86
PTPN4-204ENST00000431283 NID1P14543 1247 aa9.69□□□□□ -0.86
PTPN4-204ENST00000431283 C16orf46Q6P387 395 aa9.69□□□□□ -0.86
PTPN4-204ENST00000431283 DHX32Q7L7V1 743 aaKnown RBP9.69□□□□□ -0.86
PTPN4-204ENST00000431283 RGL4Q8IZJ4 473 aa9.69□□□□□ -0.86
PTPN4-204ENST00000431283 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
PTPN4-204ENST00000431283 PBXIP1Q96AQ6 731 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms