RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 DPEP1P16444 411 aa32.03■■■□□ 2.72
CPNE1-212ENST00000430570 BRPF1P55201 1214 aaPredicted RBP32.03■■■□□ 2.72
CPNE1-212ENST00000430570 SYNE4Q8N205 404 aa32.03■■■□□ 2.72
CPNE1-212ENST00000430570 BRIP1Q9BX63 1249 aa32.03■■■□□ 2.72
CPNE1-212ENST00000430570 ABCC12Q96J65 1359 aa32.03■■■□□ 2.72
CPNE1-212ENST00000430570 PXDNLA1KZ92 1463 aa32.03■■■□□ 2.72
CPNE1-212ENST00000430570 CHRNA5P30532 468 aa32.02■■■□□ 2.72
CPNE1-212ENST00000430570 TRMT112Q9UI30 125 aaKnown RBP32.02■■■□□ 2.72
CPNE1-212ENST00000430570 NOB1Q9ULX3 412 aaKnown RBP32.02■■■□□ 2.72
CPNE1-212ENST00000430570 N4BP2Q86UW6 1770 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-212ENST00000430570 CWF19L2Q2TBE0 894 aaKnown RBP32.01■■■□□ 2.72
CPNE1-212ENST00000430570 KCNA3P22001 575 aa32■■■□□ 2.71
CPNE1-212ENST00000430570 NEXNQ0ZGT2 675 aa32■■■□□ 2.71
CPNE1-212ENST00000430570 CCDC191Q8NCU4 936 aa32■■■□□ 2.71
CPNE1-212ENST00000430570 PTPRCP08575 1304 aa32■■■□□ 2.71
CPNE1-212ENST00000430570 WWC3Q9ULE0 1092 aa32■■■□□ 2.71
CPNE1-212ENST00000430570 NEURL1BA8MQ27 555 aa31.99■■■□□ 2.71
CPNE1-212ENST00000430570 CWC25Q9NXE8 425 aaPredicted RBP31.99■■■□□ 2.71
CPNE1-212ENST00000430570 PDE6BP35913 854 aa31.98■■■□□ 2.71
CPNE1-212ENST00000430570 RTL5Q5HYW3 569 aaPredicted RBP31.98■■■□□ 2.71
CPNE1-212ENST00000430570 BEND3Q5T5X7 828 aa31.98■■■□□ 2.71
CPNE1-212ENST00000430570 C2CD5Q86YS7 1000 aa31.98■■■□□ 2.71
CPNE1-212ENST00000430570 JARID2Q92833 1246 aaPredicted RBP31.98■■■□□ 2.71
CPNE1-212ENST00000430570 FAM89AQ96GI7 184 aa31.98■■■□□ 2.71
CPNE1-212ENST00000430570 SLC10A5Q5PT55 438 aa31.97■■■□□ 2.71
CPNE1-212ENST00000430570 SLC4A10Q6U841 1118 aa31.97■■■□□ 2.71
CPNE1-212ENST00000430570 SH3TC1Q8TE82 1336 aa31.96■■■□□ 2.71
CPNE1-212ENST00000430570 LINS1Q8NG48 757 aa31.96■■■□□ 2.71
CPNE1-212ENST00000430570 HCLS1P14317 486 aaPredicted RBP31.95■■■□□ 2.7
CPNE1-212ENST00000430570 C3orf67Q6ZVT6 689 aa31.95■■■□□ 2.7
CPNE1-212ENST00000430570 RNF123Q5XPI4 1314 aa31.95■■■□□ 2.7
CPNE1-212ENST00000430570 TNRC6CQ9HCJ0 1690 aaKnown RBP31.94■■■□□ 2.7
CPNE1-212ENST00000430570 KLRG2A4D1S0 409 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-212ENST00000430570 H0YIN7 160 aa31.94■■■□□ 2.7
CPNE1-212ENST00000430570 ZBTB38Q8NAP3 1195 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-212ENST00000430570 COL11A2P13942 1736 aaPredicted RBP31.92■■■□□ 2.7
CPNE1-212ENST00000430570 PCCAP05165 728 aaPredicted RBP31.92■■■□□ 2.7
CPNE1-212ENST00000430570 GCKRQ14397 625 aa31.92■■■□□ 2.7
CPNE1-212ENST00000430570 SRGNP10124 158 aa31.91■■■□□ 2.7
CPNE1-212ENST00000430570 KIF16BQ96L93 1317 aa31.91■■■□□ 2.7
CPNE1-212ENST00000430570 RIC1Q4ADV7 1423 aa31.91■■■□□ 2.7
CPNE1-212ENST00000430570 FRAT1Q92837 279 aaPredicted RBP31.9■■■□□ 2.7
CPNE1-212ENST00000430570 PIM2Q9P1W9 311 aa31.9■■■□□ 2.7
CPNE1-212ENST00000430570 PDZRN3Q9UPQ7 1066 aa31.9■■■□□ 2.7
CPNE1-212ENST00000430570 TNNQ9UQP3 1299 aa31.9■■■□□ 2.7
CPNE1-212ENST00000430570 IRS4O14654 1257 aaPredicted RBP31.89■■■□□ 2.7
CPNE1-212ENST00000430570 PELP1Q8IZL8 1130 aaKnown RBP31.89■■■□□ 2.7
CPNE1-212ENST00000430570 ARHGAP45Q92619 1136 aa31.89■■■□□ 2.7
CPNE1-212ENST00000430570 ZNF622Q969S3 477 aaKnown RBP eCLIP31.89■■■□□ 2.74e-6■■□□□ 12.1
CPNE1-212ENST00000430570 API5Q9BZZ5 524 aaKnown RBP31.89■■■□□ 2.7
CPNE1-212ENST00000430570 SRCIN1Q9C0H9 1055 aa31.89■■■□□ 2.7
CPNE1-212ENST00000430570 BRCA1P38398 1863 aaKnown RBP31.89■■■□□ 2.69
CPNE1-212ENST00000430570 H7C1W4 665 aa31.88■■■□□ 2.69
CPNE1-212ENST00000430570 YBX3P16989 372 aaKnown RBP eCLIP31.88■■■□□ 2.692e-6■■■■□ 21.8
CPNE1-212ENST00000430570 NLRP3Q96P20 1036 aa31.88■■■□□ 2.69
CPNE1-212ENST00000430570 DDX60Q8IY21 1712 aaKnown RBP31.88■■■□□ 2.69
CPNE1-212ENST00000430570 DLEC1Q9Y238 1755 aa31.87■■■□□ 2.69
CPNE1-212ENST00000430570 CRY2Q49AN0 593 aa31.87■■■□□ 2.69
CPNE1-212ENST00000430570 MASTLQ96GX5 879 aa31.87■■■□□ 2.69
CPNE1-212ENST00000430570 ALDH1L1O75891 902 aa31.86■■■□□ 2.69
CPNE1-212ENST00000430570 RCAN3Q9UKA8 241 aa31.86■■■□□ 2.69
CPNE1-212ENST00000430570 CASP7P55210 303 aa31.85■■■□□ 2.69
CPNE1-212ENST00000430570 GPR162Q16538 588 aa31.85■■■□□ 2.69
CPNE1-212ENST00000430570 BCS1LQ9Y276 419 aa31.85■■■□□ 2.69
CPNE1-212ENST00000430570 IPO8O15397 1037 aaKnown RBP31.84■■■□□ 2.69
CPNE1-212ENST00000430570 TRIM27P14373 513 aa31.84■■■□□ 2.69
CPNE1-212ENST00000430570 NPR1P16066 1061 aa31.84■■■□□ 2.69
CPNE1-212ENST00000430570 STYK1Q6J9G0 422 aa31.84■■■□□ 2.69
CPNE1-212ENST00000430570 UBE3BQ7Z3V4 1068 aa31.84■■■□□ 2.69
CPNE1-212ENST00000430570 LAMB2P55268 1798 aa31.84■■■□□ 2.69
CPNE1-212ENST00000430570 CDHR2Q9BYE9 1310 aa31.83■■■□□ 2.69
CPNE1-212ENST00000430570 ATF7IPQ6VMQ6 1270 aa31.83■■■□□ 2.69
CPNE1-212ENST00000430570 DALRD3Q5D0E6 543 aaKnown RBP31.82■■■□□ 2.68
CPNE1-212ENST00000430570 ZKSCAN2Q63HK3 967 aa31.82■■■□□ 2.68
CPNE1-212ENST00000430570 TTLL6Q8N841 843 aa31.82■■■□□ 2.68
CPNE1-212ENST00000430570 PDE8AO60658 829 aa31.8■■■□□ 2.68
CPNE1-212ENST00000430570 RPGRQ92834 1020 aaKnown RBP31.8■■■□□ 2.68
CPNE1-212ENST00000430570 ABCC4O15439 1325 aa31.8■■■□□ 2.68
CPNE1-212ENST00000430570 GRM8O00222 908 aa31.79■■■□□ 2.68
CPNE1-212ENST00000430570 HOXA10P31260 410 aaPredicted RBP31.79■■■□□ 2.68
CPNE1-212ENST00000430570 SF3B3Q15393 1217 aaKnown RBP31.79■■■□□ 2.68
CPNE1-212ENST00000430570 CNKSR1Q969H4 720 aa31.79■■■□□ 2.68
CPNE1-212ENST00000430570 CLUAP1Q96AJ1 413 aa31.79■■■□□ 2.68
CPNE1-212ENST00000430570 CCT4P50991 539 aaKnown RBP31.78■■■□□ 2.68
CPNE1-212ENST00000430570 C9orf78Q9NZ63 289 aaPredicted RBP31.78■■■□□ 2.68
CPNE1-212ENST00000430570 RBM17Q96I25 401 aaKnown RBP31.77■■■□□ 2.68
CPNE1-212ENST00000430570 SLX4Q8IY92 1834 aa31.76■■■□□ 2.68
CPNE1-212ENST00000430570 NBPF7P0C2Y1 421 aaPredicted RBP31.76■■■□□ 2.68
CPNE1-212ENST00000430570 CACNA1SQ13698 1873 aa31.76■■■□□ 2.68
CPNE1-212ENST00000430570 DCAF8L1A6NGE4 600 aa31.75■■■□□ 2.67
CPNE1-212ENST00000430570 HSP90B1P14625 803 aaKnown RBP31.75■■■□□ 2.67
CPNE1-212ENST00000430570 INTS3Q68E01 1043 aaKnown RBP31.75■■■□□ 2.67
CPNE1-212ENST00000430570 PRPF40BQ6NWY9 871 aaKnown RBP31.75■■■□□ 2.67
CPNE1-212ENST00000430570 CRAMP1Q96RY5 1269 aa31.75■■■□□ 2.67
CPNE1-212ENST00000430570 PLA2G12BQ9BX93 195 aa31.75■■■□□ 2.67
CPNE1-212ENST00000430570 USP44Q9H0E7 712 aa31.75■■■□□ 2.67
CPNE1-212ENST00000430570 ALDH1B1P30837 517 aa31.75■■■□□ 2.67
CPNE1-212ENST00000430570 CCDC85AQ96PX6 553 aaPredicted RBP31.75■■■□□ 2.67
CPNE1-212ENST00000430570 ZNF219Q9P2Y4 722 aaPredicted RBP31.75■■■□□ 2.67
CPNE1-212ENST00000430570 UTYO14607 1347 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms