RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 GEN1Q17RS7 908 aa18.78■□□□□ 0.6
RIF1-204ENST00000430328 STRN4Q9NRL3 753 aa18.78■□□□□ 0.6
RIF1-204ENST00000430328 TMOD2Q9NZR1 351 aa18.78■□□□□ 0.6
RIF1-204ENST00000430328 SMG6Q86US8 1419 aaKnown RBP18.77■□□□□ 0.6
RIF1-204ENST00000430328 SH2B1Q9NRF2 756 aaPredicted RBP18.77■□□□□ 0.6
RIF1-204ENST00000430328 SH3BGRP55822 239 aaPredicted RBP18.77■□□□□ 0.6
RIF1-204ENST00000430328 WHAMMP3Q1A5X7 153 aa18.77■□□□□ 0.6
RIF1-204ENST00000430328 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
RIF1-204ENST00000430328 NCAPGQ9BPX3 1015 aa18.77■□□□□ 0.6
RIF1-204ENST00000430328 MKNK2Q9HBH9 465 aa18.77■□□□□ 0.6
RIF1-204ENST00000430328 CRCPO75575 148 aa18.77■□□□□ 0.59
RIF1-204ENST00000430328 BICD1Q96G01 975 aa18.77■□□□□ 0.59
RIF1-204ENST00000430328 ATP5DP30049 168 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 UTP14AQ9BVJ6 771 aaKnown RBP18.76■□□□□ 0.59
RIF1-204ENST00000430328 CNTLNQ9NXG0 1405 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 GAS8O95995 478 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 FSIP1Q8NA03 581 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 CTCFLQ8NI51 663 aaPredicted RBP18.76■□□□□ 0.59
RIF1-204ENST00000430328 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
RIF1-204ENST00000430328 ZNF365Q70YC5 407 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 FAM76AQ8TAV0 307 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 CTAGE1Q96RT6 745 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 ZC4H2Q9NQZ6 224 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 DIXDC1Q155Q3 683 aa18.76■□□□□ 0.59
RIF1-204ENST00000430328 GKAP1Q5VSY0 366 aaPredicted RBP18.76■□□□□ 0.59
RIF1-204ENST00000430328 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
RIF1-204ENST00000430328 CNGA1P29973 690 aa18.75■□□□□ 0.59
RIF1-204ENST00000430328 GSDMBQ8TAX9 411 aa18.75■□□□□ 0.59
RIF1-204ENST00000430328 USP37Q86T82 979 aa18.75■□□□□ 0.59
RIF1-204ENST00000430328 LMBR1Q8WVP7 490 aa18.75■□□□□ 0.59
RIF1-204ENST00000430328 FAM169AQ9Y6X4 670 aa18.75■□□□□ 0.59
RIF1-204ENST00000430328 SSRP1Q08945 709 aaKnown RBP18.75■□□□□ 0.59
RIF1-204ENST00000430328 HNRNPMP52272 730 aaKnown RBP eCLIP18.75■□□□□ 0.597e-8■■■□□ 15.7
RIF1-204ENST00000430328 LRRC27Q9C0I9 530 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 CCDC194A0A1B0GVG4 234 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 HSPA1LP34931 641 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 VCX3AQ9NNX9 186 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 MTRF1LQ9UGC7 380 aaKnown RBP18.74■□□□□ 0.59
RIF1-204ENST00000430328 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 CCDC38Q502W7 563 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 CEP126Q9P2H0 1117 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 UBASH3AP57075 661 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 ZNF165P49910 485 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 FAM160A1Q05DH4 1040 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 HDGFL1Q5TGJ6 251 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
RIF1-204ENST00000430328 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
RIF1-204ENST00000430328 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
RIF1-204ENST00000430328 PSMD6Q15008 389 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
RIF1-204ENST00000430328 FYB2Q5VWT5 728 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 N4BP3O15049 544 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 MTUS1Q9ULD2 1270 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 VAV2P52735 878 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 HVCN1Q96D96 273 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 NKIRAS1Q9NYS0 192 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 SMIM23A6NLE4 172 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 UVSSAQ2YD98 709 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 NAA16Q6N069 864 aaPredicted RBP18.73■□□□□ 0.59
RIF1-204ENST00000430328 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
RIF1-204ENST00000430328 ARHGAP24Q8N264 748 aa18.73■□□□□ 0.59
RIF1-204ENST00000430328 ARHGEF2Q92974 986 aaKnown RBP18.73■□□□□ 0.59
RIF1-204ENST00000430328 TRPC3Q13507 836 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 ANKRD24Q8TF21 1146 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 BIN1O00499 593 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 NLRP5P59047 1200 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 VIMP08670 466 aaKnown RBP18.72■□□□□ 0.59
RIF1-204ENST00000430328 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
RIF1-204ENST00000430328 TUBBP07437 444 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 CCDC89Q8N998 374 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 CRACR2BQ8N4Y2 399 aaPredicted RBP18.72■□□□□ 0.59
RIF1-204ENST00000430328 EXOC1Q9NV70 894 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 SLC12A7Q9Y666 1083 aa18.72■□□□□ 0.59
RIF1-204ENST00000430328 FMNL3Q8IVF7 1028 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 RMND1Q9NWS8 449 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 WDR78Q5VTH9 848 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 ATF3P18847 181 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 PLCB3Q01970 1234 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 CCDC62Q6P9F0 684 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 DNAI1Q9UI46 699 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 TUBB4AP04350 444 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 SRGAP3O43295 1099 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 FCHSD2O94868 740 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 INPP1P49441 399 aa18.71■□□□□ 0.59
RIF1-204ENST00000430328 CCDC25Q86WR0 208 aa18.71■□□□□ 0.58
RIF1-204ENST00000430328 AFAP1L2Q8N4X5 818 aa18.71■□□□□ 0.58
RIF1-204ENST00000430328 TBC1D31Q96DN5 1066 aa18.71■□□□□ 0.58
RIF1-204ENST00000430328 TRIM47Q96LD4 638 aa18.71■□□□□ 0.58
RIF1-204ENST00000430328 XAB2Q9HCS7 855 aaKnown RBP18.71■□□□□ 0.58
RIF1-204ENST00000430328 GOLGA8AA7E2F4 631 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 IDEP14735 1019 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 MCUR1Q96AQ8 359 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 NAPBQ9H115 298 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms