RNA–Protein interactions for RNA: ENST00000430198.2

HMGA1P2-201, Transcript of high mobility group AT-hook 1 pseudogene 2, humanhuman

BASIC

Gene HMGA1P2, Length 324 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P2-201ENST00000430198 ALDH1B1P30837 517 aa16.48■□□□□ 0.23
HMGA1P2-201ENST00000430198 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
HMGA1P2-201ENST00000430198 GPR101Q96P66 508 aaPredicted RBP16.48■□□□□ 0.23
HMGA1P2-201ENST00000430198 DLK2Q6UY11 383 aa16.47■□□□□ 0.23
HMGA1P2-201ENST00000430198 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
HMGA1P2-201ENST00000430198 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
HMGA1P2-201ENST00000430198 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
HMGA1P2-201ENST00000430198 JDP2Q8WYK2 163 aa16.46■□□□□ 0.23
HMGA1P2-201ENST00000430198 ZIC5Q96T25 663 aa16.46■□□□□ 0.23
HMGA1P2-201ENST00000430198 PSMD1Q99460 953 aa16.46■□□□□ 0.23
HMGA1P2-201ENST00000430198 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
HMGA1P2-201ENST00000430198 GPTP24298 496 aa16.45■□□□□ 0.22
HMGA1P2-201ENST00000430198 GTF2E1P29083 439 aaPredicted RBP16.45■□□□□ 0.22
HMGA1P2-201ENST00000430198 RGS19P49795 217 aa16.45■□□□□ 0.22
HMGA1P2-201ENST00000430198 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
HMGA1P2-201ENST00000430198 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
HMGA1P2-201ENST00000430198 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
HMGA1P2-201ENST00000430198 UBN2Q6ZU65 1347 aa16.44■□□□□ 0.22
HMGA1P2-201ENST00000430198 HOXA10P31260 410 aaPredicted RBP16.43■□□□□ 0.22
HMGA1P2-201ENST00000430198 MLLT1Q03111 559 aaPredicted RBP16.43■□□□□ 0.22
HMGA1P2-201ENST00000430198 LARGE2Q8N3Y3 721 aa16.43■□□□□ 0.22
HMGA1P2-201ENST00000430198 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
HMGA1P2-201ENST00000430198 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
HMGA1P2-201ENST00000430198 SHTN1A0MZ66 631 aa16.42■□□□□ 0.22
HMGA1P2-201ENST00000430198 HIRAP54198 1017 aaPredicted RBP16.42■□□□□ 0.22
HMGA1P2-201ENST00000430198 GLIS2Q9BZE0 524 aaPredicted RBP16.42■□□□□ 0.22
HMGA1P2-201ENST00000430198 CASP8AP2Q9UKL3 1982 aa16.41■□□□□ 0.22
HMGA1P2-201ENST00000430198 CXCL9Q07325 125 aa16.41■□□□□ 0.22
HMGA1P2-201ENST00000430198 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
HMGA1P2-201ENST00000430198 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 AOC3Q16853 763 aa16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 MCOLN1Q9GZU1 580 aa16.4■□□□□ 0.22
HMGA1P2-201ENST00000430198 MYL6BP14649 208 aa16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 ZNF34Q8IZ26 560 aa16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 NUP98P52948 1817 aa16.39■□□□□ 0.21
HMGA1P2-201ENST00000430198 THSD7BQ9C0I4 1608 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 RGL2O15211 777 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 CELF2O95319 508 aaKnown RBP16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 ECE1P42892 770 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 CRAMP1Q96RY5 1269 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 MAP3K15Q6ZN16 1313 aa16.38■□□□□ 0.21
HMGA1P2-201ENST00000430198 TRPM7Q96QT4 1865 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 NTSR2O95665 410 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 MAP2K2P36507 400 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 GMPSP49915 693 aaPredicted RBP16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 CIAPIN1Q6FI81 312 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 BEGAINQ9BUH8 593 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
HMGA1P2-201ENST00000430198 PPP2R1AP30153 589 aa16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 ZNF408Q9H9D4 720 aa16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
HMGA1P2-201ENST00000430198 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
HMGA1P2-201ENST00000430198 RAD17O75943 681 aa16.35■□□□□ 0.21
HMGA1P2-201ENST00000430198 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
HMGA1P2-201ENST00000430198 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
HMGA1P2-201ENST00000430198 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
HMGA1P2-201ENST00000430198 ANXA1P04083 346 aa16.34■□□□□ 0.21
HMGA1P2-201ENST00000430198 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
HMGA1P2-201ENST00000430198 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
HMGA1P2-201ENST00000430198 ATP6V0A2Q9Y487 856 aa16.34■□□□□ 0.21
HMGA1P2-201ENST00000430198 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
HMGA1P2-201ENST00000430198 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
HMGA1P2-201ENST00000430198 DGKZQ13574 1117 aa16.33■□□□□ 0.2
HMGA1P2-201ENST00000430198 PDIA6Q15084 440 aa16.33■□□□□ 0.2
HMGA1P2-201ENST00000430198 PROSER3Q2NL68 480 aa16.33■□□□□ 0.2
HMGA1P2-201ENST00000430198 USP48Q86UV5 1035 aa16.33■□□□□ 0.2
HMGA1P2-201ENST00000430198 ABCC4O15439 1325 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 EGFRP00533 1210 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 TAF1P21675 1872 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 SLC10A5Q5PT55 438 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
HMGA1P2-201ENST00000430198 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
HMGA1P2-201ENST00000430198 KIF6Q6ZMV9 814 aa16.31■□□□□ 0.2
HMGA1P2-201ENST00000430198 NLRP3Q96P20 1036 aa16.31■□□□□ 0.2
HMGA1P2-201ENST00000430198 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
HMGA1P2-201ENST00000430198 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms