RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 SYNMO15061 1565 aa8.39□□□□□ -1.07
ATXN3-204ENST00000429774 ZNF213O14771 459 aa8.39□□□□□ -1.07
ATXN3-204ENST00000429774 TTF1Q15361 905 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-204ENST00000429774 CCDC144CPQ8IYA2 1237 aa8.39□□□□□ -1.07
ATXN3-204ENST00000429774 LARP6Q9BRS8 491 aaKnown RBP8.39□□□□□ -1.07
ATXN3-204ENST00000429774 ZNF287Q9HBT7 754 aa8.39□□□□□ -1.07
ATXN3-204ENST00000429774 ANKRD1Q15327 319 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 G2E3Q7L622 706 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 VEZTQ9HBM0 779 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 TRPM1Q7Z4N2 1603 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 SPTY2D1Q68D10 685 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-204ENST00000429774 SPATA31E1Q6ZUB1 1445 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 HAND2P61296 217 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 MTERF4Q7Z6M4 381 aaKnown RBP8.38□□□□□ -1.07
ATXN3-204ENST00000429774 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 HDAC9Q9UKV0 1011 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 PER1O15534 1290 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-204ENST00000429774 PHKG2P15735 406 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 DDX11Q96FC9 970 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 PLA2R1Q13018 1463 aa8.38□□□□□ -1.07
ATXN3-204ENST00000429774 ADGRL3Q9HAR2 1447 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 KCNQ3O43525 872 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 KRT18P05783 430 aaKnown RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 TSR1Q2NL82 804 aaKnown RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 BAG3O95817 575 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 CYP7A1P22680 504 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 SEC63Q9UGP8 760 aaKnown RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 H0YIN7 160 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 VAMP4O75379 141 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 TFCP2Q12800 502 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 RABEP1Q15276 862 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 ATP2B3Q16720 1220 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 ZHX3Q9H4I2 956 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 PRM3Q9NNZ6 103 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 CHMP5Q9NZZ3 219 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 U3KPZ7 1027 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 USP6P35125 1406 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 IGHDP01880 384 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 GSTO1P78417 241 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 NUCB2P80303 420 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 SASS6Q6UVJ0 657 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 EVI5LQ96CN4 794 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 INO80Q9ULG1 1556 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 CCDC73Q6ZRK6 1079 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 KRT27Q7Z3Y8 459 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 ZC3H12CQ9C0D7 883 aaKnown RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 VAT1LQ9HCJ6 419 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 ZC3H13Q5T200 1668 aaKnown RBP8.37□□□□□ -1.07
ATXN3-204ENST00000429774 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
ATXN3-204ENST00000429774 UNC5CLQ8IV45 518 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 PRR36Q9H6K5 1346 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 OGFOD1Q8N543 542 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 JDP2Q8WYK2 163 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 FEZ1Q99689 392 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 ARHGEF40Q8TER5 1519 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 ATP7BP35670 1465 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 EPS15P42566 896 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 ZNF594Q96JF6 807 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-204ENST00000429774 ERVV-2B6SEH9 535 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 RAB11FIP4Q86YS3 637 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 CERKQ8TCT0 537 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 CEP89Q96ST8 783 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 ITGA6P23229 1130 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-204ENST00000429774 TEX35Q5T0J7 233 aa8.36□□□□□ -1.07
ATXN3-204ENST00000429774 UFL1O94874 794 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 HLA-DOAP06340 250 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 SKOR2Q2VWA4 1001 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-204ENST00000429774 AFF2P51816 1311 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 WWC2Q6AWC2 1192 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 SLC4A4Q9Y6R1 1079 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 ALDH1L1O75891 902 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-204ENST00000429774 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 KRT32Q14532 448 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 ZNF396Q96N95 335 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-204ENST00000429774 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
ATXN3-204ENST00000429774 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
ATXN3-204ENST00000429774 LDHCP07864 332 aa8.35□□□□□ -1.07
ATXN3-204ENST00000429774 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
ATXN3-204ENST00000429774 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 METTL22Q9BUU2 404 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-204ENST00000429774 DDX21Q9NR30 783 aaKnown RBP eCLIP8.34□□□□□ -1.07
ATXN3-204ENST00000429774 ASAP1Q9ULH1 1129 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 TSPY2A6NKD2 308 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 TAF5LO75529 589 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 TXLNAP40222 546 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 MATR3P43243 847 aaKnown RBP eCLIP8.34□□□□□ -1.07
ATXN3-204ENST00000429774 STK38Q15208 465 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.07
ATXN3-204ENST00000429774 MIGA1Q8NAN2 632 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 SLC12A7Q9Y666 1083 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 USP19O94966 1318 aa8.34□□□□□ -1.07
ATXN3-204ENST00000429774 CDKL5O76039 1030 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms