RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 KIAA1024Q9UPX6 916 aa10.95□□□□□ -0.66
PTPRK-211ENST00000429595 MAGI3Q5TCQ9 1506 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 TEAD4Q15561 434 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 SH3PXD2AQ5TCZ1 1133 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 BICDL1Q6ZP65 573 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 TNS4Q8IZW8 715 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 GJA3Q9Y6H8 435 aa10.94□□□□□ -0.66
PTPRK-211ENST00000429595 EML1O00423 815 aa10.93□□□□□ -0.66
PTPRK-211ENST00000429595 MARK1Q9P0L2 795 aa10.93□□□□□ -0.66
PTPRK-211ENST00000429595 KDM5BQ9UGL1 1544 aa10.93□□□□□ -0.66
PTPRK-211ENST00000429595 NOS2P35228 1153 aa10.92□□□□□ -0.66
PTPRK-211ENST00000429595 UCN2Q96RP3 112 aa10.92□□□□□ -0.66
PTPRK-211ENST00000429595 C1QTNF9BB2RNN3 333 aa10.91□□□□□ -0.66
PTPRK-211ENST00000429595 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
PTPRK-211ENST00000429595 LRRC69Q6ZNQ3 347 aa10.91□□□□□ -0.66
PTPRK-211ENST00000429595 CD163Q86VB7 1156 aa10.91□□□□□ -0.66
PTPRK-211ENST00000429595 WDR7Q9Y4E6 1490 aa10.91□□□□□ -0.66
PTPRK-211ENST00000429595 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
PTPRK-211ENST00000429595 K7ELQ4 463 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-211ENST00000429595 CHRNA4P43681 627 aa10.9□□□□□ -0.66
PTPRK-211ENST00000429595 CLDN10P78369 228 aa10.9□□□□□ -0.66
PTPRK-211ENST00000429595 LAMC2Q13753 1193 aa10.9□□□□□ -0.66
PTPRK-211ENST00000429595 TRIM11Q96F44 468 aa10.9□□□□□ -0.66
PTPRK-211ENST00000429595 MDFIQ99750 246 aa10.9□□□□□ -0.66
PTPRK-211ENST00000429595 PRR12Q9ULL5 1215 aa10.9□□□□□ -0.66
PTPRK-211ENST00000429595 PIK3R2O00459 728 aa10.89□□□□□ -0.67
PTPRK-211ENST00000429595 FURINP09958 794 aa10.89□□□□□ -0.67
PTPRK-211ENST00000429595 TPCN2Q8NHX9 752 aa10.89□□□□□ -0.67
PTPRK-211ENST00000429595 ZCCHC11Q5TAX3 1644 aaKnown RBP10.88□□□□□ -0.67
PTPRK-211ENST00000429595 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 RAPGEF3O95398 923 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 BCORL1Q5H9F3 1711 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 USP17L2Q6R6M4 530 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 PLEKHM2Q8IWE5 1019 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 NOP53Q9NZM5 478 aaKnown RBP10.88□□□□□ -0.67
PTPRK-211ENST00000429595 ZNF232Q9UNY5 417 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 CFAP43Q8NDM7 1665 aa10.88□□□□□ -0.67
PTPRK-211ENST00000429595 SYT9Q86SS6 491 aa10.87□□□□□ -0.67
PTPRK-211ENST00000429595 RIMS1Q86UR5 1692 aaKnown RBP10.87□□□□□ -0.67
PTPRK-211ENST00000429595 ARAP3Q8WWN8 1544 aa10.87□□□□□ -0.67
PTPRK-211ENST00000429595 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 SERTM1A2A2V5 107 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 RAD21O60216 631 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
PTPRK-211ENST00000429595 CCDC102BQ68D86 513 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 TSPAN10Q9H1Z9 355 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-211ENST00000429595 BIVM-ERCC5R4GMW8 1640 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 PHLDB1Q86UU1 1377 aa10.86□□□□□ -0.67
PTPRK-211ENST00000429595 POGZQ7Z3K3 1410 aa10.85□□□□□ -0.67
PTPRK-211ENST00000429595 XP32Q5T750 250 aa10.85□□□□□ -0.67
PTPRK-211ENST00000429595 POTEAQ6S8J7 498 aa10.85□□□□□ -0.67
PTPRK-211ENST00000429595 SLC30A3Q99726 388 aa10.85□□□□□ -0.67
PTPRK-211ENST00000429595 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-211ENST00000429595 ELOA3DA6NLF2 546 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-211ENST00000429595 UBAP1LF5GYI3 381 aa10.84□□□□□ -0.67
PTPRK-211ENST00000429595 UBTFP17480 764 aaKnown RBP10.84□□□□□ -0.67
PTPRK-211ENST00000429595 ELOA3BQ3SY89 546 aa10.84□□□□□ -0.67
PTPRK-211ENST00000429595 HDGFL1Q5TGJ6 251 aa10.84□□□□□ -0.67
PTPRK-211ENST00000429595 ELOA3Q8NG57 546 aa10.84□□□□□ -0.67
PTPRK-211ENST00000429595 GPC6Q9Y625 555 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-211ENST00000429595 ATP9BO43861 1147 aa10.83□□□□□ -0.68
PTPRK-211ENST00000429595 MLECQ14165 292 aa10.83□□□□□ -0.68
PTPRK-211ENST00000429595 FAM9AQ8IZU1 332 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-211ENST00000429595 RHPN1Q8TCX5 695 aa10.83□□□□□ -0.68
PTPRK-211ENST00000429595 PLVAPQ9BX97 442 aa10.83□□□□□ -0.68
PTPRK-211ENST00000429595 DKK1O94907 266 aa10.82□□□□□ -0.68
PTPRK-211ENST00000429595 ATP1A2P50993 1020 aa10.82□□□□□ -0.68
PTPRK-211ENST00000429595 HIRAP54198 1017 aaPredicted RBP10.82□□□□□ -0.68
PTPRK-211ENST00000429595 PSMA6P60900 246 aaKnown RBP10.82□□□□□ -0.68
PTPRK-211ENST00000429595 FLIIQ13045 1269 aa10.82□□□□□ -0.68
PTPRK-211ENST00000429595 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
PTPRK-211ENST00000429595 HSH2DQ96JZ2 352 aa10.82□□□□□ -0.68
PTPRK-211ENST00000429595 SIN3BO75182 1162 aa10.81□□□□□ -0.68
PTPRK-211ENST00000429595 MKRN1Q9UHC7 482 aaKnown RBP10.81□□□□□ -0.68
PTPRK-211ENST00000429595 HCN4Q9Y3Q4 1203 aa10.81□□□□□ -0.68
PTPRK-211ENST00000429595 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
PTPRK-211ENST00000429595 SIX5Q8N196 739 aa10.8□□□□□ -0.68
PTPRK-211ENST00000429595 TSEN2Q8NCE0 465 aaKnown RBP10.8□□□□□ -0.68
PTPRK-211ENST00000429595 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
PTPRK-211ENST00000429595 STARD13Q9Y3M8 1113 aa10.8□□□□□ -0.68
PTPRK-211ENST00000429595 IQSEC2Q5JU85 1478 aa10.8□□□□□ -0.68
PTPRK-211ENST00000429595 SFI1A8K8P3 1242 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 M0R2N6 131 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 C21orf2O43822 256 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 ITGB7P26010 798 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-211ENST00000429595 C1orf53Q5VUE5 145 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 RAB44Q7Z6P3 723 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-211ENST00000429595 LARGE2Q8N3Y3 721 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 ZNF280CQ8ND82 737 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
PTPRK-211ENST00000429595 IQGAP2Q13576 1575 aa10.78□□□□□ -0.68
PTPRK-211ENST00000429595 SPEM2Q0P670 501 aa10.78□□□□□ -0.68
PTPRK-211ENST00000429595 TNFRSF25Q93038 417 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms