RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 SLC10A5Q5PT55 438 aa11.96□□□□□ -0.49
NEDD1-203ENST00000429527 SLX4Q8IY92 1834 aa11.96□□□□□ -0.49
NEDD1-203ENST00000429527 RLBP1P12271 317 aa11.96□□□□□ -0.49
NEDD1-203ENST00000429527 DPEP1P16444 411 aa11.96□□□□□ -0.49
NEDD1-203ENST00000429527 CLEC17AQ6ZS10 378 aa11.96□□□□□ -0.49
NEDD1-203ENST00000429527 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.49
NEDD1-203ENST00000429527 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
NEDD1-203ENST00000429527 PDE6BP35913 854 aa11.96□□□□□ -0.5
NEDD1-203ENST00000429527 CRY2Q49AN0 593 aa11.96□□□□□ -0.5
NEDD1-203ENST00000429527 PRR5LQ6MZQ0 368 aa11.96□□□□□ -0.5
NEDD1-203ENST00000429527 SEC24BO95487 1268 aa11.95□□□□□ -0.5
NEDD1-203ENST00000429527 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
NEDD1-203ENST00000429527 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
NEDD1-203ENST00000429527 FRAT2O75474 233 aaPredicted RBP11.95□□□□□ -0.5
NEDD1-203ENST00000429527 TRIM28Q13263 835 aaKnown RBP11.95□□□□□ -0.5
NEDD1-203ENST00000429527 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
NEDD1-203ENST00000429527 GIGYF2Q6Y7W6 1299 aaKnown RBP11.95□□□□□ -0.5
NEDD1-203ENST00000429527 ADAMTSL1Q8N6G6 1762 aa11.94□□□□□ -0.5
NEDD1-203ENST00000429527 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
NEDD1-203ENST00000429527 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
NEDD1-203ENST00000429527 CCDC88AQ3V6T2 1871 aa11.94□□□□□ -0.5
NEDD1-203ENST00000429527 YY1P25490 414 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 HOXA10P31260 410 aaPredicted RBP11.93□□□□□ -0.5
NEDD1-203ENST00000429527 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
NEDD1-203ENST00000429527 MYH3P11055 1940 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
NEDD1-203ENST00000429527 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 CNGB1Q14028 1251 aaPredicted RBP11.93□□□□□ -0.5
NEDD1-203ENST00000429527 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 C7orf43Q8WVR3 580 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 A0A1B0GUL6 1792 aa11.93□□□□□ -0.5
NEDD1-203ENST00000429527 PSME4Q14997 1843 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 GPR162Q16538 588 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 SCN4AP35499 1836 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
NEDD1-203ENST00000429527 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
NEDD1-203ENST00000429527 CIZ1Q9ULV3 898 aaPredicted RBP11.92□□□□□ -0.5
NEDD1-203ENST00000429527 NTSR2O95665 410 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 ST5P78524 1137 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 ZBTB40Q9NUA8 1239 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
NEDD1-203ENST00000429527 SRGNP10124 158 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 MIS18AQ9NYP9 233 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 UBN2Q6ZU65 1347 aa11.91□□□□□ -0.5
NEDD1-203ENST00000429527 MASTLQ96GX5 879 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
NEDD1-203ENST00000429527 NPR1P16066 1061 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 CNBD1Q8NA66 436 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 PLBD2Q8NHP8 589 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 TBC1D2BQ9UPU7 963 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 ZNF609O15014 1411 aa11.9□□□□□ -0.5
NEDD1-203ENST00000429527 HLFQ16534 295 aa11.9□□□□□ -0.51
NEDD1-203ENST00000429527 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.51
NEDD1-203ENST00000429527 CNKSR1Q969H4 720 aa11.9□□□□□ -0.51
NEDD1-203ENST00000429527 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 A0A0G2JLW4 131 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 H0YIN7 160 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
NEDD1-203ENST00000429527 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
NEDD1-203ENST00000429527 NUCB1Q02818 461 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 C2CD5Q86YS7 1000 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 TTLL6Q8N841 843 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 CRAMP1Q96RY5 1269 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
NEDD1-203ENST00000429527 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
NEDD1-203ENST00000429527 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
NEDD1-203ENST00000429527 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
NEDD1-203ENST00000429527 ATF7IPQ6VMQ6 1270 aa11.88□□□□□ -0.51
NEDD1-203ENST00000429527 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
NEDD1-203ENST00000429527 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
NEDD1-203ENST00000429527 EIF5BO60841 1220 aaKnown RBP11.87□□□□□ -0.51
NEDD1-203ENST00000429527 PTMSP20962 102 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 RGS3P49796 1198 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 ABCC4O15439 1325 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 TRIM27P14373 513 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 BMP2KLQ5H9B9 411 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
NEDD1-203ENST00000429527 CHMP5Q9NZZ3 219 aa11.87□□□□□ -0.51
NEDD1-203ENST00000429527 RRP7AQ9Y3A4 280 aaKnown RBP11.87□□□□□ -0.51
NEDD1-203ENST00000429527 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
NEDD1-203ENST00000429527 NIP7Q9Y221 180 aaKnown RBP eCLIP11.86□□□□□ -0.51
NEDD1-203ENST00000429527 MCM4P33991 863 aa11.86□□□□□ -0.51
NEDD1-203ENST00000429527 CHRNA5P30532 468 aa11.85□□□□□ -0.51
NEDD1-203ENST00000429527 NLRP10Q86W26 655 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms