RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 MICALCLQ6ZW33 695 aa18.19■□□□□ 0.5
C4A-243ENST00000428956 ALS2CR12Q96Q35 445 aa18.19■□□□□ 0.5
C4A-243ENST00000428956 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
C4A-243ENST00000428956 RBM27Q9P2N5 1060 aaKnown RBP18.19■□□□□ 0.5
C4A-243ENST00000428956 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
C4A-243ENST00000428956 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
C4A-243ENST00000428956 NLRP5P59047 1200 aa18.19■□□□□ 0.5
C4A-243ENST00000428956 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
C4A-243ENST00000428956 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
C4A-243ENST00000428956 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
C4A-243ENST00000428956 PTCD1O75127 700 aaKnown RBP18.18■□□□□ 0.5
C4A-243ENST00000428956 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
C4A-243ENST00000428956 ZNF444Q8N0Y2 327 aaPredicted RBP18.18■□□□□ 0.5
C4A-243ENST00000428956 USHBP1Q8N6Y0 703 aa18.18■□□□□ 0.5
C4A-243ENST00000428956 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
C4A-243ENST00000428956 GOLIM4O00461 696 aa18.18■□□□□ 0.5
C4A-243ENST00000428956 TRMT112Q9UI30 125 aaKnown RBP18.18■□□□□ 0.5
C4A-243ENST00000428956 LUZP1Q86V48 1076 aa18.18■□□□□ 0.5
C4A-243ENST00000428956 TRMT1Q9NXH9 659 aaKnown RBP18.18■□□□□ 0.5
C4A-243ENST00000428956 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
C4A-243ENST00000428956 HCLS1P14317 486 aaPredicted RBP18.17■□□□□ 0.5
C4A-243ENST00000428956 METAP2P50579 478 aaKnown RBP eCLIP18.17■□□□□ 0.5
C4A-243ENST00000428956 TMOD2Q9NZR1 351 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 RANBP6O60518 1105 aaKnown RBP18.17■□□□□ 0.5
C4A-243ENST00000428956 INSRP06213 1382 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 TMEM67Q5HYA8 995 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 ZSCAN29Q8IWY8 852 aaPredicted RBP18.17■□□□□ 0.5
C4A-243ENST00000428956 DCTPP1Q9H773 170 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 ZFYVE9O95405 1425 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 RBM5P52756 815 aaKnown RBP eCLIP18.17■□□□□ 0.5
C4A-243ENST00000428956 DZIP1Q86YF9 867 aaKnown RBP18.17■□□□□ 0.5
C4A-243ENST00000428956 MEIS3Q99687 375 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 RMND1Q9NWS8 449 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
C4A-243ENST00000428956 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
C4A-243ENST00000428956 PLCH2O75038 1416 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 TMTC2Q8N394 836 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 CTAGE1Q96RT6 745 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
C4A-243ENST00000428956 ACEP12821 1306 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
C4A-243ENST00000428956 TOM1O60784 492 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 F13A1P00488 732 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
C4A-243ENST00000428956 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
C4A-243ENST00000428956 NOLC1Q14978 699 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■□□□ 13.7
C4A-243ENST00000428956 CALML4Q96GE6 196 aa18.15■□□□□ 0.5
C4A-243ENST00000428956 FAM83GA6ND36 823 aa18.15■□□□□ 0.5
C4A-243ENST00000428956 SPAG1Q07617 926 aa18.15■□□□□ 0.5
C4A-243ENST00000428956 USP48Q86UV5 1035 aa18.15■□□□□ 0.5
C4A-243ENST00000428956 SRRTQ9BXP5 876 aaKnown RBP18.15■□□□□ 0.5
C4A-243ENST00000428956 PPP4R3BQ5MIZ7 849 aa18.14■□□□□ 0.5
C4A-243ENST00000428956 ANKRD24Q8TF21 1146 aa18.14■□□□□ 0.5
C4A-243ENST00000428956 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 NPC1L1Q9UHC9 1359 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 LDHCP07864 332 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 MFSD6Q6ZSS7 791 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 MRPS27Q92552 414 aaKnown RBP18.14■□□□□ 0.49
C4A-243ENST00000428956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.14■□□□□ 0.49
C4A-243ENST00000428956 MTIF2P46199 727 aaKnown RBP18.14■□□□□ 0.49
C4A-243ENST00000428956 TUBB4BP68371 445 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 SYKP43405 635 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.49
C4A-243ENST00000428956 ANKRD62A6NC57 917 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 RBM8AQ9Y5S9 174 aaKnown RBP18.13■□□□□ 0.49
C4A-243ENST00000428956 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
C4A-243ENST00000428956 KRT23Q9C075 422 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 GCOM1H8Y6P7 765 aaPredicted RBP18.13■□□□□ 0.49
C4A-243ENST00000428956 MYZAPP0CAP1 466 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 CDC5LQ99459 802 aaKnown RBP18.13■□□□□ 0.49
C4A-243ENST00000428956 CNNM2Q9H8M5 875 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 EHMT1Q9H9B1 1298 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 ZBTB40Q9NUA8 1239 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 LDHAL6AQ6ZMR3 332 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 BRF1Q92994 677 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 DNAI2Q9GZS0 605 aa18.13■□□□□ 0.49
C4A-243ENST00000428956 PDE4BQ07343 736 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
C4A-243ENST00000428956 CCDC91Q7Z6B0 441 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 RAD50Q92878 1312 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 BIN1O00499 593 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 MCMDC2Q4G0Z9 681 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 UBE3BQ7Z3V4 1068 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 TAOK3Q9H2K8 898 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 CFAP43Q8NDM7 1665 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 CKAP4Q07065 602 aaKnown RBP18.12■□□□□ 0.49
C4A-243ENST00000428956 TESK2Q96S53 571 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 TDRD12Q587J7 1177 aaKnown RBP18.12■□□□□ 0.49
C4A-243ENST00000428956 CNPY2Q9Y2B0 182 aa18.12■□□□□ 0.49
C4A-243ENST00000428956 ZPR1O75312 459 aa18.11■□□□□ 0.49
C4A-243ENST00000428956 UBA7P41226 1012 aa18.11■□□□□ 0.49
C4A-243ENST00000428956 CETN1Q12798 172 aa18.11■□□□□ 0.49
C4A-243ENST00000428956 CPLX3Q8WVH0 158 aa18.11■□□□□ 0.49
C4A-243ENST00000428956 CUL5Q93034 780 aa18.11■□□□□ 0.49
C4A-243ENST00000428956 LARP6Q9BRS8 491 aaKnown RBP18.11■□□□□ 0.49
C4A-243ENST00000428956 KRT222Q8N1A0 295 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms