RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 CLSTN2Q9H4D0 955 aa12.68□□□□□ -0.38
ATP2C1-204ENST00000428331 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 POLA2Q14181 598 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 CDC37L1Q7L3B6 337 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 IL25Q9H293 177 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 C1orf141Q5JVX7 400 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 CEP57L1Q8IYX8 460 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 ATP2B3Q16720 1220 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 ZSCAN16Q9H4T2 348 aaPredicted RBP12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 CHPF2Q9P2E5 772 aa12.67□□□□□ -0.38
ATP2C1-204ENST00000428331 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 ANO10Q9NW15 660 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 CPS1P31327 1500 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 LRMPQ12912 555 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 ZSCAN25Q6NSZ9 544 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 LEO1Q8WVC0 666 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 CCDC8Q9H0W5 538 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 STX1AQ16623 288 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 KCNF1Q9H3M0 494 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 KNDC1Q76NI1 1749 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 SYCP1Q15431 976 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 DDX11Q96FC9 970 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 TMEM131LA2VDJ0 1609 aa12.66□□□□□ -0.38
ATP2C1-204ENST00000428331 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 IGSF1Q8N6C5 1336 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 SKILP12757 684 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 DHX8Q14562 1220 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 LARP1Q6PKG0 1096 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 IGSF3O75054 1194 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 KRT222Q8N1A0 295 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 SIL1Q9H173 461 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 DIP2CQ9Y2E4 1556 aa12.65□□□□□ -0.38
ATP2C1-204ENST00000428331 SLC27A2O14975 620 aa12.65□□□□□ -0.39
ATP2C1-204ENST00000428331 ME1P48163 572 aa12.65□□□□□ -0.39
ATP2C1-204ENST00000428331 FOSBP53539 338 aa12.65□□□□□ -0.39
ATP2C1-204ENST00000428331 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.39
ATP2C1-204ENST00000428331 ANXA1P04083 346 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 HOXB7P09629 217 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 TDRD7Q8NHU6 1098 aaKnown RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 SLC26A8Q96RN1 970 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 A2ML1A8K2U0 1454 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 GSDMDP57764 484 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 BRF1Q92994 677 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 ZNF530Q6P9A1 599 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 ZNF397Q8NF99 534 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 ARGLU1Q9NWB6 273 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
ATP2C1-204ENST00000428331 ANKRD7Q92527 254 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 NPHP1O15259 732 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 NECTIN1Q15223 517 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 BEND3Q5T5X7 828 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 USHBP1Q8N6Y0 703 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 NRBP1Q9UHY1 535 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 USP6P35125 1406 aa12.63□□□□□ -0.39
ATP2C1-204ENST00000428331 CTIFO43310 598 aaKnown RBP12.62□□□□□ -0.39
ATP2C1-204ENST00000428331 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
ATP2C1-204ENST00000428331 SMC2O95347 1197 aa12.62□□□□□ -0.39
ATP2C1-204ENST00000428331 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
ATP2C1-204ENST00000428331 NCBP1Q09161 790 aaKnown RBP12.62□□□□□ -0.39
ATP2C1-204ENST00000428331 NR1I2O75469 434 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 CCP110O43303 1012 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 HOXC9P31274 260 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 TEX35Q5T0J7 233 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 CCDC69A6NI79 296 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 AP5Z1O43299 807 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 MNS1Q8NEH6 495 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 CACTINQ8WUQ7 758 aaKnown RBP12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 DLG5Q8TDM6 1919 aa12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 SLU7O95391 586 aaKnown RBP12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
ATP2C1-204ENST00000428331 HMGB1P09429 215 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms