RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 HOXB7P09629 217 aa24.83■■□□□ 1.57
AL954642.1-201ENST00000428088 VEGFAP15692 232 aaPredicted RBP24.83■■□□□ 1.57
AL954642.1-201ENST00000428088 DUSP27Q5VZP5 1158 aa24.83■■□□□ 1.57
AL954642.1-201ENST00000428088 ZNF853P0CG23 659 aa24.82■■□□□ 1.56
AL954642.1-201ENST00000428088 FKBP4Q02790 459 aaKnown RBP eCLIP24.82■■□□□ 1.56
AL954642.1-201ENST00000428088 C3orf67Q6ZVT6 689 aa24.82■■□□□ 1.56
AL954642.1-201ENST00000428088 UTP14AQ9BVJ6 771 aaKnown RBP24.82■■□□□ 1.56
AL954642.1-201ENST00000428088 RIC1Q4ADV7 1423 aa24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 POTECB2RU33 542 aa24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 APLP1P51693 650 aa24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 HSP90AB3PQ58FF7 597 aa24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 RTKN2Q8IZC4 609 aa24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 ZNF277Q9NRM2 450 aaPredicted RBP24.81■■□□□ 1.56
AL954642.1-201ENST00000428088 HOXA10P31260 410 aaPredicted RBP24.8■■□□□ 1.56
AL954642.1-201ENST00000428088 FSTL1Q12841 308 aa24.8■■□□□ 1.56
AL954642.1-201ENST00000428088 TCIRG1Q13488 830 aa24.8■■□□□ 1.56
AL954642.1-201ENST00000428088 IFT57Q9NWB7 429 aa24.8■■□□□ 1.56
AL954642.1-201ENST00000428088 WDR90Q96KV7 1748 aa24.8■■□□□ 1.56
AL954642.1-201ENST00000428088 GNAI1P63096 354 aa24.79■■□□□ 1.56
AL954642.1-201ENST00000428088 NLRP10Q86W26 655 aa24.79■■□□□ 1.56
AL954642.1-201ENST00000428088 RBM17Q96I25 401 aaKnown RBP24.79■■□□□ 1.56
AL954642.1-201ENST00000428088 NLRP3Q96P20 1036 aa24.79■■□□□ 1.56
AL954642.1-201ENST00000428088 DBF4Q9UBU7 674 aaPredicted RBP24.79■■□□□ 1.56
AL954642.1-201ENST00000428088 DDNO94850 711 aaPredicted RBP24.78■■□□□ 1.56
AL954642.1-201ENST00000428088 CALD1Q05682 793 aaKnown RBP24.78■■□□□ 1.56
AL954642.1-201ENST00000428088 SLC10A5Q5PT55 438 aa24.78■■□□□ 1.56
AL954642.1-201ENST00000428088 SYNE4Q8N205 404 aa24.78■■□□□ 1.56
AL954642.1-201ENST00000428088 ELL2O00472 640 aaPredicted RBP24.77■■□□□ 1.56
AL954642.1-201ENST00000428088 ZNF428Q96B54 188 aa24.77■■□□□ 1.56
AL954642.1-201ENST00000428088 CRAMP1Q96RY5 1269 aa24.77■■□□□ 1.56
AL954642.1-201ENST00000428088 TCERG1O14776 1098 aaKnown RBP24.76■■□□□ 1.55
AL954642.1-201ENST00000428088 ANKRD13DQ6ZTN6 518 aa24.76■■□□□ 1.55
AL954642.1-201ENST00000428088 SLC51AQ86UW1 340 aa24.76■■□□□ 1.55
AL954642.1-201ENST00000428088 SMC1BQ8NDV3 1235 aa24.76■■□□□ 1.55
AL954642.1-201ENST00000428088 PLBD2Q8NHP8 589 aa24.75■■□□□ 1.55
AL954642.1-201ENST00000428088 HYPKQ9NX55 129 aa24.75■■□□□ 1.55
AL954642.1-201ENST00000428088 TRMT112Q9UI30 125 aaKnown RBP24.75■■□□□ 1.55
AL954642.1-201ENST00000428088 LAMB2P55268 1798 aa24.75■■□□□ 1.55
AL954642.1-201ENST00000428088 PPEF1O14829 653 aaPredicted RBP24.74■■□□□ 1.55
AL954642.1-201ENST00000428088 HCLS1P14317 486 aaPredicted RBP24.74■■□□□ 1.55
AL954642.1-201ENST00000428088 IARSP41252 1262 aaKnown RBP24.74■■□□□ 1.55
AL954642.1-201ENST00000428088 RNF123Q5XPI4 1314 aa24.74■■□□□ 1.55
AL954642.1-201ENST00000428088 SNED1Q8TER0 1413 aa24.74■■□□□ 1.55
AL954642.1-201ENST00000428088 HTRA3P83110 453 aa24.73■■□□□ 1.55
AL954642.1-201ENST00000428088 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
AL954642.1-201ENST00000428088 C8orf58Q8NAV2 365 aa24.73■■□□□ 1.55
AL954642.1-201ENST00000428088 PSMD1Q99460 953 aa24.73■■□□□ 1.55
AL954642.1-201ENST00000428088 ANP32CO43423 234 aa24.72■■□□□ 1.55
AL954642.1-201ENST00000428088 MRS2Q9HD23 443 aa24.72■■□□□ 1.55
AL954642.1-201ENST00000428088 SH3TC1Q8TE82 1336 aa24.71■■□□□ 1.55
AL954642.1-201ENST00000428088 ATP5J2-PTCD1G3V325 749 aa24.71■■□□□ 1.55
AL954642.1-201ENST00000428088 DNAJC5GQ8N7S2 189 aa24.71■■□□□ 1.55
AL954642.1-201ENST00000428088 ABCC4O15439 1325 aa24.7■■□□□ 1.54
AL954642.1-201ENST00000428088 ZNF541Q9H0D2 1346 aa24.7■■□□□ 1.54
AL954642.1-201ENST00000428088 ISCA1Q9BUE6 129 aa24.7■■□□□ 1.54
AL954642.1-201ENST00000428088 PHAXQ9H814 394 aaKnown RBP24.7■■□□□ 1.54
AL954642.1-201ENST00000428088 TAF1P21675 1872 aa24.68■■□□□ 1.54
AL954642.1-201ENST00000428088 FZD9O00144 591 aa24.68■■□□□ 1.54
AL954642.1-201ENST00000428088 GRIPAP1Q4V328 841 aa24.68■■□□□ 1.54
AL954642.1-201ENST00000428088 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
AL954642.1-201ENST00000428088 TSR2Q969E8 191 aaKnown RBP24.68■■□□□ 1.54
AL954642.1-201ENST00000428088 CCDC27Q2M243 656 aa24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 TSPYL6Q8N831 410 aa24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 JDP2Q8WYK2 163 aa24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 FAM89AQ96GI7 184 aa24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 L3MBTL3Q96JM7 780 aaPredicted RBP24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 TMX4Q9H1E5 349 aaPredicted RBP24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 ATP6V0A2Q9Y487 856 aa24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 SCN4AP35499 1836 aa24.67■■□□□ 1.54
AL954642.1-201ENST00000428088 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 POTEIP0CG38 1075 aa24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 POTEJP0CG39 1038 aa24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 GOLGA2Q08379 1002 aa24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 DDX46Q7L014 1031 aaKnown RBP24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 WWC1Q8IX03 1113 aa24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 COL4A5P29400 1685 aa24.66■■□□□ 1.54
AL954642.1-201ENST00000428088 IQCA1LA6NCM1 817 aa24.65■■□□□ 1.54
AL954642.1-201ENST00000428088 BBOX1O75936 387 aa24.65■■□□□ 1.54
AL954642.1-201ENST00000428088 RTL5Q5HYW3 569 aaPredicted RBP24.65■■□□□ 1.54
AL954642.1-201ENST00000428088 CCDC30Q5VVM6 783 aa24.64■■□□□ 1.54
AL954642.1-201ENST00000428088 LARGE2Q8N3Y3 721 aa24.64■■□□□ 1.54
AL954642.1-201ENST00000428088 TRIM28Q13263 835 aaKnown RBP24.63■■□□□ 1.53
AL954642.1-201ENST00000428088 TAF1DQ9H5J8 278 aaPredicted RBP24.63■■□□□ 1.53
AL954642.1-201ENST00000428088 EIF6P56537 245 aaKnown RBP24.62■■□□□ 1.53
AL954642.1-201ENST00000428088 GRAPQ13588 217 aa24.62■■□□□ 1.53
AL954642.1-201ENST00000428088 CHADLQ6NUI6 762 aa24.62■■□□□ 1.53
AL954642.1-201ENST00000428088 SP8Q8IXZ3 490 aa24.62■■□□□ 1.53
AL954642.1-201ENST00000428088 GRAPLQ8TC17 118 aaPredicted RBP24.62■■□□□ 1.53
AL954642.1-201ENST00000428088 GPC2Q8N158 579 aa24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 KLRG1Q96E93 195 aa24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 MYD88Q99836 296 aa24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 CHMP4AQ9BY43 222 aa24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 HACL1Q9UJ83 578 aa24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 SALL2Q9Y467 1007 aaPredicted RBP24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 PCNTO95613 3336 aa24.61■■□□□ 1.53
AL954642.1-201ENST00000428088 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
AL954642.1-201ENST00000428088 AOC3Q16853 763 aa24.6■■□□□ 1.53
AL954642.1-201ENST00000428088 GJA3Q9Y6H8 435 aa24.6■■□□□ 1.53
AL954642.1-201ENST00000428088 IRS4O14654 1257 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms