RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PARP10Q53GL7 1025 aa24.87■■□□□ 1.57
COL9A2-204ENST00000427563 OLFM4Q6UX06 510 aa24.87■■□□□ 1.57
COL9A2-204ENST00000427563 NLRP10Q86W26 655 aa24.86■■□□□ 1.57
COL9A2-204ENST00000427563 SNED1Q8TER0 1413 aa24.86■■□□□ 1.57
COL9A2-204ENST00000427563 LMNB1P20700 586 aa24.85■■□□□ 1.57
COL9A2-204ENST00000427563 SLC51AQ86UW1 340 aa24.85■■□□□ 1.57
COL9A2-204ENST00000427563 SYNE4Q8N205 404 aa24.85■■□□□ 1.57
COL9A2-204ENST00000427563 PLBD2Q8NHP8 589 aa24.85■■□□□ 1.57
COL9A2-204ENST00000427563 PHAXQ9H814 394 aaKnown RBP24.85■■□□□ 1.57
COL9A2-204ENST00000427563 PPP1R42Q7Z4L9 355 aa24.84■■□□□ 1.57
COL9A2-204ENST00000427563 ZNF428Q96B54 188 aa24.84■■□□□ 1.57
COL9A2-204ENST00000427563 NMRK2Q9NPI5 230 aa24.84■■□□□ 1.57
COL9A2-204ENST00000427563 HYPKQ9NX55 129 aa24.84■■□□□ 1.57
COL9A2-204ENST00000427563 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
COL9A2-204ENST00000427563 DDX60Q8IY21 1712 aaKnown RBP24.83■■□□□ 1.57
COL9A2-204ENST00000427563 ANKRD13DQ6ZTN6 518 aa24.83■■□□□ 1.57
COL9A2-204ENST00000427563 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
COL9A2-204ENST00000427563 UTP14AQ9BVJ6 771 aaKnown RBP24.83■■□□□ 1.57
COL9A2-204ENST00000427563 IL16Q14005 1332 aa24.83■■□□□ 1.56
COL9A2-204ENST00000427563 LTBP3Q9NS15 1303 aa24.83■■□□□ 1.56
COL9A2-204ENST00000427563 HSP90AB3PQ58FF7 597 aa24.82■■□□□ 1.56
COL9A2-204ENST00000427563 SLC10A5Q5PT55 438 aa24.82■■□□□ 1.56
COL9A2-204ENST00000427563 ISCA1Q9BUE6 129 aa24.82■■□□□ 1.56
COL9A2-204ENST00000427563 HOXA10P31260 410 aaPredicted RBP24.81■■□□□ 1.56
COL9A2-204ENST00000427563 SPINK5Q9NQ38 1064 aaPredicted RBP24.8■■□□□ 1.56
COL9A2-204ENST00000427563 TAF1P21675 1872 aa24.8■■□□□ 1.56
COL9A2-204ENST00000427563 TAOK3Q9H2K8 898 aa24.79■■□□□ 1.56
COL9A2-204ENST00000427563 FANCIQ9NVI1 1328 aa24.79■■□□□ 1.56
COL9A2-204ENST00000427563 ZC3H4Q9UPT8 1303 aaKnown RBP24.79■■□□□ 1.56
COL9A2-204ENST00000427563 ATP5J2-PTCD1G3V325 749 aa24.78■■□□□ 1.56
COL9A2-204ENST00000427563 ALDH1B1P30837 517 aa24.78■■□□□ 1.56
COL9A2-204ENST00000427563 CCDC93Q567U6 631 aa24.78■■□□□ 1.56
COL9A2-204ENST00000427563 RNF123Q5XPI4 1314 aa24.78■■□□□ 1.56
COL9A2-204ENST00000427563 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
COL9A2-204ENST00000427563 HCLS1P14317 486 aaPredicted RBP24.77■■□□□ 1.56
COL9A2-204ENST00000427563 SOGA3Q5TF21 947 aa24.77■■□□□ 1.56
COL9A2-204ENST00000427563 WDR63Q8IWG1 891 aa24.77■■□□□ 1.56
COL9A2-204ENST00000427563 COL4A1P02462 1669 aa24.76■■□□□ 1.55
COL9A2-204ENST00000427563 CCDC30Q5VVM6 783 aa24.76■■□□□ 1.55
COL9A2-204ENST00000427563 RPGRQ92834 1020 aaKnown RBP24.76■■□□□ 1.55
COL9A2-204ENST00000427563 CRAMP1Q96RY5 1269 aa24.76■■□□□ 1.55
COL9A2-204ENST00000427563 TRMT112Q9UI30 125 aaKnown RBP24.76■■□□□ 1.55
COL9A2-204ENST00000427563 TWISTNBQ3B726 338 aaPredicted RBP24.75■■□□□ 1.55
COL9A2-204ENST00000427563 NLRP3Q96P20 1036 aa24.75■■□□□ 1.55
COL9A2-204ENST00000427563 SH3TC1Q8TE82 1336 aa24.75■■□□□ 1.55
COL9A2-204ENST00000427563 FKBP4Q02790 459 aaKnown RBP eCLIP24.74■■□□□ 1.55
COL9A2-204ENST00000427563 TRIM28Q13263 835 aaKnown RBP24.74■■□□□ 1.55
COL9A2-204ENST00000427563 COL4A5P29400 1685 aa24.73■■□□□ 1.55
COL9A2-204ENST00000427563 KDM2BQ8NHM5 1336 aa24.73■■□□□ 1.55
COL9A2-204ENST00000427563 GLTPD2A6NH11 291 aa24.73■■□□□ 1.55
COL9A2-204ENST00000427563 RBM17Q96I25 401 aaKnown RBP24.73■■□□□ 1.55
COL9A2-204ENST00000427563 RRAGCQ9HB90 399 aa24.73■■□□□ 1.55
COL9A2-204ENST00000427563 WDR90Q96KV7 1748 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 ABCC4O15439 1325 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 ZNF521Q96K83 1311 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 GOLGA2Q08379 1002 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 G2E3Q7L622 706 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 RIC3Q7Z5B4 369 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 FAM89AQ96GI7 184 aa24.72■■□□□ 1.55
COL9A2-204ENST00000427563 ZNF277Q9NRM2 450 aaPredicted RBP24.72■■□□□ 1.55
COL9A2-204ENST00000427563 POTECB2RU33 542 aa24.71■■□□□ 1.55
COL9A2-204ENST00000427563 CEP350Q5VT06 3117 aa24.7■■□□□ 1.55
COL9A2-204ENST00000427563 PPEF1O14829 653 aaPredicted RBP24.7■■□□□ 1.54
COL9A2-204ENST00000427563 VAMP4O75379 141 aa24.7■■□□□ 1.54
COL9A2-204ENST00000427563 EXOSC9Q06265 439 aaKnown RBP24.7■■□□□ 1.54
COL9A2-204ENST00000427563 RTKN2Q8IZC4 609 aa24.7■■□□□ 1.54
COL9A2-204ENST00000427563 MYD88Q99836 296 aa24.7■■□□□ 1.54
COL9A2-204ENST00000427563 CACNA1FO60840 1977 aa24.7■■□□□ 1.54
COL9A2-204ENST00000427563 TOMM70O94826 608 aa24.68■■□□□ 1.54
COL9A2-204ENST00000427563 RTL5Q5HYW3 569 aaPredicted RBP24.68■■□□□ 1.54
COL9A2-204ENST00000427563 PSMD1Q99460 953 aa24.68■■□□□ 1.54
COL9A2-204ENST00000427563 METTL22Q9BUU2 404 aaPredicted RBP24.68■■□□□ 1.54
COL9A2-204ENST00000427563 MAP3K2Q9Y2U5 619 aa24.67■■□□□ 1.54
COL9A2-204ENST00000427563 LRRC37AA6NMS7 1700 aa24.66■■□□□ 1.54
COL9A2-204ENST00000427563 SLC4A2P04920 1241 aa24.66■■□□□ 1.54
COL9A2-204ENST00000427563 IGKV5-2P06315 115 aa24.66■■□□□ 1.54
COL9A2-204ENST00000427563 PI4KAP2A4QPH2 592 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 IARSP41252 1262 aaKnown RBP24.65■■□□□ 1.54
COL9A2-204ENST00000427563 SF3B3Q15393 1217 aaKnown RBP24.65■■□□□ 1.54
COL9A2-204ENST00000427563 CC2D2BQ6DHV5 1058 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 KSR2Q6VAB6 950 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 PI4KAP1Q8N8J0 262 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 ZBTB38Q8NAP3 1195 aaPredicted RBP24.65■■□□□ 1.54
COL9A2-204ENST00000427563 JARID2Q92833 1246 aaPredicted RBP24.65■■□□□ 1.54
COL9A2-204ENST00000427563 STK31Q9BXU1 1019 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 CHMP4AQ9BY43 222 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 ATP6V0A2Q9Y487 856 aa24.65■■□□□ 1.54
COL9A2-204ENST00000427563 ZNF541Q9H0D2 1346 aa24.64■■□□□ 1.54
COL9A2-204ENST00000427563 IRS4O14654 1257 aaPredicted RBP24.64■■□□□ 1.54
COL9A2-204ENST00000427563 DDNO94850 711 aaPredicted RBP24.64■■□□□ 1.54
COL9A2-204ENST00000427563 DDX58O95786 925 aaKnown RBP24.64■■□□□ 1.54
COL9A2-204ENST00000427563 CCDC191Q8NCU4 936 aa24.64■■□□□ 1.54
COL9A2-204ENST00000427563 DUOX1Q9NRD9 1551 aa24.63■■□□□ 1.53
COL9A2-204ENST00000427563 GRAPQ13588 217 aa24.63■■□□□ 1.53
COL9A2-204ENST00000427563 RBM46Q8TBY0 533 aaKnown RBP24.63■■□□□ 1.53
COL9A2-204ENST00000427563 GRAPLQ8TC17 118 aaPredicted RBP24.63■■□□□ 1.53
COL9A2-204ENST00000427563 HSPA6P17066 643 aa24.62■■□□□ 1.53
COL9A2-204ENST00000427563 DDX46Q7L014 1031 aaKnown RBP24.62■■□□□ 1.53
COL9A2-204ENST00000427563 FZD9O00144 591 aa24.61■■□□□ 1.53
COL9A2-204ENST00000427563 BBOX1O75936 387 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms