RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 NTSR2O95665 410 aa17.24■□□□□ 0.35
LINC00476-203ENST00000427259 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
LINC00476-203ENST00000427259 TAOK3Q9H2K8 898 aa17.24■□□□□ 0.35
LINC00476-203ENST00000427259 LTBP3Q9NS15 1303 aa17.23■□□□□ 0.35
LINC00476-203ENST00000427259 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
LINC00476-203ENST00000427259 GLTPD2A6NH11 291 aa17.23■□□□□ 0.35
LINC00476-203ENST00000427259 CRY2Q49AN0 593 aa17.23■□□□□ 0.35
LINC00476-203ENST00000427259 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
LINC00476-203ENST00000427259 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
LINC00476-203ENST00000427259 COL4A5P29400 1685 aa17.23■□□□□ 0.35
LINC00476-203ENST00000427259 RIC1Q4ADV7 1423 aa17.22■□□□□ 0.35
LINC00476-203ENST00000427259 DDX60Q8IY21 1712 aaKnown RBP17.22■□□□□ 0.35
LINC00476-203ENST00000427259 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
LINC00476-203ENST00000427259 AIMP1Q12904 312 aaKnown RBP17.22■□□□□ 0.35
LINC00476-203ENST00000427259 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
LINC00476-203ENST00000427259 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
LINC00476-203ENST00000427259 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
LINC00476-203ENST00000427259 HTRA3P83110 453 aa17.21■□□□□ 0.35
LINC00476-203ENST00000427259 SYNE4Q8N205 404 aa17.21■□□□□ 0.35
LINC00476-203ENST00000427259 COL4A1P02462 1669 aa17.2■□□□□ 0.34
LINC00476-203ENST00000427259 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
LINC00476-203ENST00000427259 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
LINC00476-203ENST00000427259 CFAP44Q96MT7 982 aa17.2■□□□□ 0.34
LINC00476-203ENST00000427259 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
LINC00476-203ENST00000427259 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00476-203ENST00000427259 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
LINC00476-203ENST00000427259 ZNF277Q9NRM2 450 aaPredicted RBP17.19■□□□□ 0.34
LINC00476-203ENST00000427259 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
LINC00476-203ENST00000427259 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
LINC00476-203ENST00000427259 DDNO94850 711 aaPredicted RBP17.17■□□□□ 0.34
LINC00476-203ENST00000427259 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00476-203ENST00000427259 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
LINC00476-203ENST00000427259 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
LINC00476-203ENST00000427259 ZNF541Q9H0D2 1346 aa17.17■□□□□ 0.34
LINC00476-203ENST00000427259 ANP32CO43423 234 aa17.16■□□□□ 0.34
LINC00476-203ENST00000427259 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
LINC00476-203ENST00000427259 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
LINC00476-203ENST00000427259 ELL2O00472 640 aaPredicted RBP17.15■□□□□ 0.34
LINC00476-203ENST00000427259 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
LINC00476-203ENST00000427259 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
LINC00476-203ENST00000427259 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
LINC00476-203ENST00000427259 VEGFAP15692 232 aaPredicted RBP17.15■□□□□ 0.34
LINC00476-203ENST00000427259 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
LINC00476-203ENST00000427259 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
LINC00476-203ENST00000427259 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
LINC00476-203ENST00000427259 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
LINC00476-203ENST00000427259 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
LINC00476-203ENST00000427259 UTP14AQ9BVJ6 771 aaKnown RBP17.15■□□□□ 0.34
LINC00476-203ENST00000427259 SCN4AP35499 1836 aa17.14■□□□□ 0.34
LINC00476-203ENST00000427259 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 HOXB7P09629 217 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 HCLS1P14317 486 aaPredicted RBP17.14■□□□□ 0.33
LINC00476-203ENST00000427259 APLP1P51693 650 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 SLC10A5Q5PT55 438 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 DNAJC5GQ8N7S2 189 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
LINC00476-203ENST00000427259 FSTL1Q12841 308 aa17.13■□□□□ 0.33
LINC00476-203ENST00000427259 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
LINC00476-203ENST00000427259 ABCC4O15439 1325 aa17.13■□□□□ 0.33
LINC00476-203ENST00000427259 ATP5J2-PTCD1G3V325 749 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 PPEF1O14829 653 aaPredicted RBP17.12■□□□□ 0.33
LINC00476-203ENST00000427259 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
LINC00476-203ENST00000427259 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 RTKN2Q8IZC4 609 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
LINC00476-203ENST00000427259 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
LINC00476-203ENST00000427259 LRRC37AA6NMS7 1700 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
LINC00476-203ENST00000427259 GNAI1P63096 354 aa17.11■□□□□ 0.33
LINC00476-203ENST00000427259 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
LINC00476-203ENST00000427259 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
LINC00476-203ENST00000427259 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
LINC00476-203ENST00000427259 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
LINC00476-203ENST00000427259 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
LINC00476-203ENST00000427259 TRMT112Q9UI30 125 aaKnown RBP17.11■□□□□ 0.33
LINC00476-203ENST00000427259 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
LINC00476-203ENST00000427259 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
LINC00476-203ENST00000427259 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
LINC00476-203ENST00000427259 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
LINC00476-203ENST00000427259 PSMD1Q99460 953 aa17.1■□□□□ 0.33
LINC00476-203ENST00000427259 FZD9O00144 591 aa17.09■□□□□ 0.33
LINC00476-203ENST00000427259 SH3TC1Q8TE82 1336 aa17.09■□□□□ 0.33
LINC00476-203ENST00000427259 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
LINC00476-203ENST00000427259 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
LINC00476-203ENST00000427259 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
LINC00476-203ENST00000427259 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
LINC00476-203ENST00000427259 HYPKQ9NX55 129 aa17.08■□□□□ 0.32
LINC00476-203ENST00000427259 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
LINC00476-203ENST00000427259 ATP6V0A2Q9Y487 856 aa17.07■□□□□ 0.32
LINC00476-203ENST00000427259 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
LINC00476-203ENST00000427259 CALD1Q05682 793 aaKnown RBP17.05■□□□□ 0.32
LINC00476-203ENST00000427259 CC2D2BQ6DHV5 1058 aa17.05■□□□□ 0.32
LINC00476-203ENST00000427259 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
LINC00476-203ENST00000427259 PCNTO95613 3336 aa17.04■□□□□ 0.32
LINC00476-203ENST00000427259 AOC3Q16853 763 aa17.04■□□□□ 0.32
LINC00476-203ENST00000427259 CCDC27Q2M243 656 aa17.04■□□□□ 0.32
LINC00476-203ENST00000427259 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms