RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 MBIPQ9NS73 344 aa32.55■■■□□ 2.8
PTPMT1-203ENST00000426530 APLP1P51693 650 aa32.54■■■□□ 2.8
PTPMT1-203ENST00000426530 PARP10Q53GL7 1025 aa32.54■■■□□ 2.8
PTPMT1-203ENST00000426530 DPY19L2Q6NUT2 758 aa32.54■■■□□ 2.8
PTPMT1-203ENST00000426530 PPP1R42Q7Z4L9 355 aa32.54■■■□□ 2.8
PTPMT1-203ENST00000426530 ZNF277Q9NRM2 450 aaPredicted RBP32.54■■■□□ 2.8
PTPMT1-203ENST00000426530 POTECB2RU33 542 aa32.53■■■□□ 2.8
PTPMT1-203ENST00000426530 ZEB1P37275 1124 aaPredicted RBP32.53■■■□□ 2.8
PTPMT1-203ENST00000426530 FKBP4Q02790 459 aaKnown RBP eCLIP32.53■■■□□ 2.8
PTPMT1-203ENST00000426530 ZNF428Q96B54 188 aa32.53■■■□□ 2.8
PTPMT1-203ENST00000426530 LAMB2P55268 1798 aa32.51■■■□□ 2.79
PTPMT1-203ENST00000426530 DDNO94850 711 aaPredicted RBP32.51■■■□□ 2.79
PTPMT1-203ENST00000426530 HTRA3P83110 453 aa32.51■■■□□ 2.79
PTPMT1-203ENST00000426530 FSTL1Q12841 308 aa32.51■■■□□ 2.79
PTPMT1-203ENST00000426530 UTP14AQ9BVJ6 771 aaKnown RBP32.51■■■□□ 2.79
PTPMT1-203ENST00000426530 DUSP27Q5VZP5 1158 aa32.5■■■□□ 2.79
PTPMT1-203ENST00000426530 SNED1Q8TER0 1413 aa32.5■■■□□ 2.79
PTPMT1-203ENST00000426530 RTKN2Q8IZC4 609 aa32.49■■■□□ 2.79
PTPMT1-203ENST00000426530 SMC1BQ8NDV3 1235 aa32.49■■■□□ 2.79
PTPMT1-203ENST00000426530 TCERG1O14776 1098 aaKnown RBP32.48■■■□□ 2.79
PTPMT1-203ENST00000426530 HOXB7P09629 217 aa32.48■■■□□ 2.79
PTPMT1-203ENST00000426530 ZNF853P0CG23 659 aa32.48■■■□□ 2.79
PTPMT1-203ENST00000426530 HOXA10P31260 410 aaPredicted RBP32.48■■■□□ 2.79
PTPMT1-203ENST00000426530 NLRP10Q86W26 655 aa32.48■■■□□ 2.79
PTPMT1-203ENST00000426530 HSP90AB3PQ58FF7 597 aa32.47■■■□□ 2.79
PTPMT1-203ENST00000426530 SYNE4Q8N205 404 aa32.47■■■□□ 2.79
PTPMT1-203ENST00000426530 RBM17Q96I25 401 aaKnown RBP32.46■■■□□ 2.79
PTPMT1-203ENST00000426530 ZNF541Q9H0D2 1346 aa32.46■■■□□ 2.79
PTPMT1-203ENST00000426530 TCIRG1Q13488 830 aa32.45■■■□□ 2.79
PTPMT1-203ENST00000426530 NLRP3Q96P20 1036 aa32.45■■■□□ 2.79
PTPMT1-203ENST00000426530 IFT57Q9NWB7 429 aa32.45■■■□□ 2.79
PTPMT1-203ENST00000426530 DBF4Q9UBU7 674 aaPredicted RBP32.45■■■□□ 2.79
PTPMT1-203ENST00000426530 ELL2O00472 640 aaPredicted RBP32.44■■■□□ 2.78
PTPMT1-203ENST00000426530 PPEF1O14829 653 aaPredicted RBP32.44■■■□□ 2.78
PTPMT1-203ENST00000426530 HCLS1P14317 486 aaPredicted RBP32.44■■■□□ 2.78
PTPMT1-203ENST00000426530 IARSP41252 1262 aaKnown RBP32.44■■■□□ 2.78
PTPMT1-203ENST00000426530 CRAMP1Q96RY5 1269 aa32.44■■■□□ 2.78
PTPMT1-203ENST00000426530 GNAI1P63096 354 aa32.42■■■□□ 2.78
PTPMT1-203ENST00000426530 SLC10A5Q5PT55 438 aa32.42■■■□□ 2.78
PTPMT1-203ENST00000426530 TRMT112Q9UI30 125 aaKnown RBP32.42■■■□□ 2.78
PTPMT1-203ENST00000426530 COL4A5P29400 1685 aa32.42■■■□□ 2.78
PTPMT1-203ENST00000426530 CALD1Q05682 793 aaKnown RBP32.41■■■□□ 2.78
PTPMT1-203ENST00000426530 PLBD2Q8NHP8 589 aa32.41■■■□□ 2.78
PTPMT1-203ENST00000426530 ZNF316A6NFI3 1004 aaPredicted RBP32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 DNAJC5GQ8N7S2 189 aa32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 PSMD1Q99460 953 aa32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 ABCC4O15439 1325 aa32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 RNF123Q5XPI4 1314 aa32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 DDX60Q8IY21 1712 aaKnown RBP32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 TAF1P21675 1872 aa32.4■■■□□ 2.78
PTPMT1-203ENST00000426530 POTEIP0CG38 1075 aa32.39■■■□□ 2.78
PTPMT1-203ENST00000426530 POTEJP0CG39 1038 aa32.39■■■□□ 2.78
PTPMT1-203ENST00000426530 ANKRD13DQ6ZTN6 518 aa32.39■■■□□ 2.78
PTPMT1-203ENST00000426530 HYPKQ9NX55 129 aa32.39■■■□□ 2.78
PTPMT1-203ENST00000426530 SH3TC1Q8TE82 1336 aa32.38■■■□□ 2.77
PTPMT1-203ENST00000426530 ATP5J2-PTCD1G3V325 749 aa32.38■■■□□ 2.77
PTPMT1-203ENST00000426530 CC2D2BQ6DHV5 1058 aa32.38■■■□□ 2.77
PTPMT1-203ENST00000426530 C8orf58Q8NAV2 365 aa32.37■■■□□ 2.77
PTPMT1-203ENST00000426530 SCN4AP35499 1836 aa32.37■■■□□ 2.77
PTPMT1-203ENST00000426530 PHAXQ9H814 394 aaKnown RBP32.36■■■□□ 2.77
PTPMT1-203ENST00000426530 ISCA1Q9BUE6 129 aa32.35■■■□□ 2.77
PTPMT1-203ENST00000426530 TSR2Q969E8 191 aaKnown RBP32.34■■■□□ 2.77
PTPMT1-203ENST00000426530 L3MBTL3Q96JM7 780 aaPredicted RBP32.34■■■□□ 2.77
PTPMT1-203ENST00000426530 MRS2Q9HD23 443 aa32.34■■■□□ 2.77
PTPMT1-203ENST00000426530 FZD9O00144 591 aa32.33■■■□□ 2.77
PTPMT1-203ENST00000426530 RTL5Q5HYW3 569 aaPredicted RBP32.33■■■□□ 2.77
PTPMT1-203ENST00000426530 JDP2Q8WYK2 163 aa32.32■■■□□ 2.76
PTPMT1-203ENST00000426530 FAM89AQ96GI7 184 aa32.32■■■□□ 2.76
PTPMT1-203ENST00000426530 ATP6V0A2Q9Y487 856 aa32.32■■■□□ 2.76
PTPMT1-203ENST00000426530 IQCA1LA6NCM1 817 aa32.31■■■□□ 2.76
PTPMT1-203ENST00000426530 ANP32CO43423 234 aa32.31■■■□□ 2.76
PTPMT1-203ENST00000426530 LARGE2Q8N3Y3 721 aa32.31■■■□□ 2.76
PTPMT1-203ENST00000426530 TSPYL6Q8N831 410 aa32.31■■■□□ 2.76
PTPMT1-203ENST00000426530 TAF1DQ9H5J8 278 aaPredicted RBP32.31■■■□□ 2.76
PTPMT1-203ENST00000426530 GOLGA2Q08379 1002 aa32.3■■■□□ 2.76
PTPMT1-203ENST00000426530 CHADLQ6NUI6 762 aa32.3■■■□□ 2.76
PTPMT1-203ENST00000426530 RIC3Q7Z5B4 369 aa32.3■■■□□ 2.76
PTPMT1-203ENST00000426530 DDX46Q7L014 1031 aaKnown RBP32.29■■■□□ 2.76
PTPMT1-203ENST00000426530 COL4A1P02462 1669 aa32.28■■■□□ 2.76
PTPMT1-203ENST00000426530 GRIPAP1Q4V328 841 aa32.28■■■□□ 2.76
PTPMT1-203ENST00000426530 KLRG1Q96E93 195 aa32.28■■■□□ 2.76
PTPMT1-203ENST00000426530 TMX4Q9H1E5 349 aaPredicted RBP32.28■■■□□ 2.76
PTPMT1-203ENST00000426530 AOC3Q16853 763 aa32.27■■■□□ 2.76
PTPMT1-203ENST00000426530 EAPPQ56P03 285 aaPredicted RBP32.27■■■□□ 2.76
PTPMT1-203ENST00000426530 WWC1Q8IX03 1113 aa32.27■■■□□ 2.76
PTPMT1-203ENST00000426530 HACL1Q9UJ83 578 aa32.27■■■□□ 2.76
PTPMT1-203ENST00000426530 GJA3Q9Y6H8 435 aa32.27■■■□□ 2.76
PTPMT1-203ENST00000426530 PPIP5K2O43314 1243 aa32.26■■■□□ 2.75
PTPMT1-203ENST00000426530 GRAPQ13588 217 aa32.26■■■□□ 2.75
PTPMT1-203ENST00000426530 GRAPLQ8TC17 118 aaPredicted RBP32.26■■■□□ 2.75
PTPMT1-203ENST00000426530 LTBP1Q14766 1721 aa32.26■■■□□ 2.75
PTPMT1-203ENST00000426530 BBOX1O75936 387 aa32.25■■■□□ 2.75
PTPMT1-203ENST00000426530 EIF6P56537 245 aaKnown RBP32.25■■■□□ 2.75
PTPMT1-203ENST00000426530 GPC2Q8N158 579 aa32.25■■■□□ 2.75
PTPMT1-203ENST00000426530 MYD88Q99836 296 aa32.25■■■□□ 2.75
PTPMT1-203ENST00000426530 LRRC37AA6NMS7 1700 aa32.24■■■□□ 2.75
PTPMT1-203ENST00000426530 CCDC27Q2M243 656 aa32.24■■■□□ 2.75
PTPMT1-203ENST00000426530 ADAMTSL1Q8N6G6 1762 aa32.24■■■□□ 2.75
PTPMT1-203ENST00000426530 EPHX2P34913 555 aa32.23■■■□□ 2.75
PTPMT1-203ENST00000426530 CCDC30Q5VVM6 783 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms