RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
SNX3-204ENST00000426155 HYPKQ9NX55 129 aa17.61■□□□□ 0.41
SNX3-204ENST00000426155 TWISTNBQ3B726 338 aaPredicted RBP17.6■□□□□ 0.41
SNX3-204ENST00000426155 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
SNX3-204ENST00000426155 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
SNX3-204ENST00000426155 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
SNX3-204ENST00000426155 TAF1P21675 1872 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 TCIRG1Q13488 830 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 NLRP10Q86W26 655 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 PLBD2Q8NHP8 589 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 MASTLQ96GX5 879 aa17.59■□□□□ 0.41
SNX3-204ENST00000426155 KLRG2A4D1S0 409 aaPredicted RBP17.58■□□□□ 0.4
SNX3-204ENST00000426155 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 C21orf2O43822 256 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
SNX3-204ENST00000426155 PARP10Q53GL7 1025 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
SNX3-204ENST00000426155 STYK1Q6J9G0 422 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 PRPF40BQ6NWY9 871 aaKnown RBP17.58■□□□□ 0.4
SNX3-204ENST00000426155 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 ZNF526Q8TF50 670 aaPredicted RBP17.58■□□□□ 0.4
SNX3-204ENST00000426155 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 CACNA1FO60840 1977 aa17.58■□□□□ 0.4
SNX3-204ENST00000426155 PRELPP51888 382 aa17.57■□□□□ 0.4
SNX3-204ENST00000426155 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
SNX3-204ENST00000426155 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
SNX3-204ENST00000426155 SLC51AQ86UW1 340 aa17.57■□□□□ 0.4
SNX3-204ENST00000426155 UTP14AQ9BVJ6 771 aaKnown RBP17.57■□□□□ 0.4
SNX3-204ENST00000426155 DICER1Q9UPY3 1922 aaKnown RBP17.57■□□□□ 0.4
SNX3-204ENST00000426155 NFKBIEO00221 500 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 NPR1P16066 1061 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 C9orf131Q5VYM1 1079 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 OLFM4Q6UX06 510 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 G2E3Q7L622 706 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 MIER1Q8N108 512 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
SNX3-204ENST00000426155 CRY2Q49AN0 593 aa17.55■□□□□ 0.4
SNX3-204ENST00000426155 RIC3Q7Z5B4 369 aa17.55■□□□□ 0.4
SNX3-204ENST00000426155 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
SNX3-204ENST00000426155 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
SNX3-204ENST00000426155 MYD88Q99836 296 aa17.54■□□□□ 0.4
SNX3-204ENST00000426155 RNF181Q9P0P0 153 aa17.54■□□□□ 0.4
SNX3-204ENST00000426155 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
SNX3-204ENST00000426155 COL4A1P02462 1669 aa17.54■□□□□ 0.4
SNX3-204ENST00000426155 VAMP4O75379 141 aa17.53■□□□□ 0.4
SNX3-204ENST00000426155 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
SNX3-204ENST00000426155 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
SNX3-204ENST00000426155 MYH16Q9H6N6 1097 aa17.53■□□□□ 0.4
SNX3-204ENST00000426155 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
SNX3-204ENST00000426155 C7orf43Q8WVR3 580 aa17.52■□□□□ 0.4
SNX3-204ENST00000426155 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
SNX3-204ENST00000426155 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
SNX3-204ENST00000426155 FAM89AQ96GI7 184 aa17.51■□□□□ 0.39
SNX3-204ENST00000426155 MAP3K2Q9Y2U5 619 aa17.51■□□□□ 0.39
SNX3-204ENST00000426155 SNED1Q8TER0 1413 aa17.5■□□□□ 0.39
SNX3-204ENST00000426155 PI4KAP2A4QPH2 592 aa17.5■□□□□ 0.39
SNX3-204ENST00000426155 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
SNX3-204ENST00000426155 PI4KAP1Q8N8J0 262 aa17.5■□□□□ 0.39
SNX3-204ENST00000426155 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
SNX3-204ENST00000426155 MYH3P11055 1940 aa17.49■□□□□ 0.39
SNX3-204ENST00000426155 DDX58O95786 925 aaKnown RBP17.49■□□□□ 0.39
SNX3-204ENST00000426155 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
SNX3-204ENST00000426155 JARID2Q92833 1246 aaPredicted RBP17.49■□□□□ 0.39
SNX3-204ENST00000426155 CDCA7LQ96GN5 454 aa17.49■□□□□ 0.39
SNX3-204ENST00000426155 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
SNX3-204ENST00000426155 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
SNX3-204ENST00000426155 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
SNX3-204ENST00000426155 GPBP1L1Q9HC44 474 aaPredicted RBP17.49■□□□□ 0.39
SNX3-204ENST00000426155 ABCC4O15439 1325 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 LMNB1P20700 586 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 FLIIQ13045 1269 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 CCDC93Q567U6 631 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 KSR2Q6VAB6 950 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 SPEF2Q9C093 1822 aa17.48■□□□□ 0.39
SNX3-204ENST00000426155 LRRC37AA6NMS7 1700 aa17.47■□□□□ 0.39
SNX3-204ENST00000426155 CAPN15O75808 1086 aa17.47■□□□□ 0.39
SNX3-204ENST00000426155 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
SNX3-204ENST00000426155 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
SNX3-204ENST00000426155 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
SNX3-204ENST00000426155 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
SNX3-204ENST00000426155 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
SNX3-204ENST00000426155 CWF19L2Q2TBE0 894 aaKnown RBP17.46■□□□□ 0.39
SNX3-204ENST00000426155 CRAMP1Q96RY5 1269 aa17.46■□□□□ 0.39
SNX3-204ENST00000426155 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.38
SNX3-204ENST00000426155 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
SNX3-204ENST00000426155 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
SNX3-204ENST00000426155 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
SNX3-204ENST00000426155 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
SNX3-204ENST00000426155 COL4A5P29400 1685 aa17.45■□□□□ 0.38
SNX3-204ENST00000426155 E9PSI1 815 aa17.44■□□□□ 0.38
SNX3-204ENST00000426155 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
SNX3-204ENST00000426155 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNX3-204ENST00000426155 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
SNX3-204ENST00000426155 CCDC191Q8NCU4 936 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms