RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
TRBV22-1-201ENST00000424543 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
TRBV22-1-201ENST00000424543 RGL2O15211 777 aa15.39■□□□□ 0.05
TRBV22-1-201ENST00000424543 PDIA6Q15084 440 aa15.39■□□□□ 0.05
TRBV22-1-201ENST00000424543 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
TRBV22-1-201ENST00000424543 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
TRBV22-1-201ENST00000424543 NYXQ9GZU5 481 aa15.39■□□□□ 0.05
TRBV22-1-201ENST00000424543 RIC1Q4ADV7 1423 aa15.38■□□□□ 0.05
TRBV22-1-201ENST00000424543 NEUROD2Q15784 382 aa15.38■□□□□ 0.05
TRBV22-1-201ENST00000424543 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
TRBV22-1-201ENST00000424543 RTKN2Q8IZC4 609 aa15.38■□□□□ 0.05
TRBV22-1-201ENST00000424543 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
TRBV22-1-201ENST00000424543 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 LDHDQ86WU2 507 aa15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 GJA3Q9Y6H8 435 aa15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
TRBV22-1-201ENST00000424543 IBTKQ9P2D0 1353 aaPredicted RBP15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 COL4A1P02462 1669 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 IQCA1LA6NCM1 817 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 FZD9O00144 591 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 PPEF1O14829 653 aaPredicted RBP15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 EPHX2P34913 555 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 AIMP1Q12904 312 aaKnown RBP15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 DDX10Q13206 875 aaKnown RBP15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
TRBV22-1-201ENST00000424543 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
TRBV22-1-201ENST00000424543 LAS1LQ9Y4W2 734 aaKnown RBP15.35■□□□□ 0.05
TRBV22-1-201ENST00000424543 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 HOXA10P31260 410 aaPredicted RBP15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 TNS4Q8IZW8 715 aa15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 XAGE3Q8WTP9 111 aa15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 PSMD1Q99460 953 aa15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 ABCC4O15439 1325 aa15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 ERBB4Q15303 1308 aa15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 CNTNAP1P78357 1384 aa15.34■□□□□ 0.05
TRBV22-1-201ENST00000424543 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.05
TRBV22-1-201ENST00000424543 HCLS1P14317 486 aaPredicted RBP15.33■□□□□ 0.04
TRBV22-1-201ENST00000424543 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
TRBV22-1-201ENST00000424543 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
TRBV22-1-201ENST00000424543 PNNQ9H307 717 aaKnown RBP15.33■□□□□ 0.04
TRBV22-1-201ENST00000424543 RALBP1Q15311 655 aa15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 AOC3Q16853 763 aa15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 PPP1R42Q7Z4L9 355 aa15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 GPC2Q8N158 579 aa15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 JDP2Q8WYK2 163 aa15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
TRBV22-1-201ENST00000424543 EPS15P42566 896 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 VEGFBP49765 207 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 SCNN1DP51172 638 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 TRIM35Q9UPQ4 493 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 DUOX1Q9NRD9 1551 aa15.31■□□□□ 0.04
TRBV22-1-201ENST00000424543 TMEM88BA6NKF7 163 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 FOXN1O15353 648 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 PPIP5K2O43314 1243 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 CNTROBQ8N137 903 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
TRBV22-1-201ENST00000424543 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
TRBV22-1-201ENST00000424543 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
TRBV22-1-201ENST00000424543 NIM1KQ8IY84 436 aa15.29■□□□□ 0.04
TRBV22-1-201ENST00000424543 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
TRBV22-1-201ENST00000424543 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
TRBV22-1-201ENST00000424543 TRAF5O00463 557 aa15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 CHL1O00533 1208 aa15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 LMOD1P29536 600 aaPredicted RBP15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 TCIRG1Q13488 830 aa15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 PNMA8AQ86V59 439 aaPredicted RBP15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 TRMT112Q9UI30 125 aaKnown RBP15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.04
TRBV22-1-201ENST00000424543 POLR2AP24928 1970 aaKnown RBP15.26■□□□□ 0.03
TRBV22-1-201ENST00000424543 SHTN1A0MZ66 631 aa15.26■□□□□ 0.03
TRBV22-1-201ENST00000424543 ATP5J2-PTCD1G3V325 749 aa15.26■□□□□ 0.03
TRBV22-1-201ENST00000424543 HDGFL1Q5TGJ6 251 aa15.26■□□□□ 0.03
TRBV22-1-201ENST00000424543 BABAM1Q9NWV8 329 aa15.26■□□□□ 0.03
TRBV22-1-201ENST00000424543 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
TRBV22-1-201ENST00000424543 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
TRBV22-1-201ENST00000424543 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
TRBV22-1-201ENST00000424543 CXCL9Q07325 125 aa15.25■□□□□ 0.03
TRBV22-1-201ENST00000424543 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
TRBV22-1-201ENST00000424543 RAD17O75943 681 aa15.24■□□□□ 0.03
TRBV22-1-201ENST00000424543 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
TRBV22-1-201ENST00000424543 GRM1Q13255 1194 aa15.24■□□□□ 0.03
TRBV22-1-201ENST00000424543 GRAPQ13588 217 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms