RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 ISCA1Q9BUE6 129 aa14.04□□□□□ -0.16
TOP3B-203ENST00000424393 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
TOP3B-203ENST00000424393 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
TOP3B-203ENST00000424393 CACNA1SQ13698 1873 aa14.04□□□□□ -0.16
TOP3B-203ENST00000424393 KLRG2A4D1S0 409 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-203ENST00000424393 H0YIN7 160 aa14.03□□□□□ -0.16
TOP3B-203ENST00000424393 PPP1R42Q7Z4L9 355 aa14.03□□□□□ -0.16
TOP3B-203ENST00000424393 RIC3Q7Z5B4 369 aa14.03□□□□□ -0.16
TOP3B-203ENST00000424393 PDZRN3Q9UPQ7 1066 aa14.03□□□□□ -0.16
TOP3B-203ENST00000424393 ADCY9O60503 1353 aa14.03□□□□□ -0.16
TOP3B-203ENST00000424393 LAMB2P55268 1798 aa14.02□□□□□ -0.16
TOP3B-203ENST00000424393 ATP5J2-PTCD1G3V325 749 aa14.02□□□□□ -0.17
TOP3B-203ENST00000424393 DDX58O95786 925 aaKnown RBP14.02□□□□□ -0.17
TOP3B-203ENST00000424393 SRGNP10124 158 aa14.02□□□□□ -0.17
TOP3B-203ENST00000424393 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.17
TOP3B-203ENST00000424393 HNRNPUQ00839 825 aaKnown RBP eCLIP14.02□□□□□ -0.17
TOP3B-203ENST00000424393 FLIIQ13045 1269 aa14.02□□□□□ -0.17
TOP3B-203ENST00000424393 DALRD3Q5D0E6 543 aaKnown RBP14.02□□□□□ -0.17
TOP3B-203ENST00000424393 ZNF428Q96B54 188 aa14.02□□□□□ -0.17
TOP3B-203ENST00000424393 UTP14AQ9BVJ6 771 aaKnown RBP14.02□□□□□ -0.17
TOP3B-203ENST00000424393 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
TOP3B-203ENST00000424393 PI4KAP2A4QPH2 592 aa14.01□□□□□ -0.17
TOP3B-203ENST00000424393 APLP1P51693 650 aa14.01□□□□□ -0.17
TOP3B-203ENST00000424393 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
TOP3B-203ENST00000424393 PI4KAP1Q8N8J0 262 aa14.01□□□□□ -0.17
TOP3B-203ENST00000424393 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.179e-7■■□□□ 12
TOP3B-203ENST00000424393 MYD88Q99836 296 aa14.01□□□□□ -0.17
TOP3B-203ENST00000424393 METTL22Q9BUU2 404 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-203ENST00000424393 MAP3K2Q9Y2U5 619 aa14.01□□□□□ -0.17
TOP3B-203ENST00000424393 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
TOP3B-203ENST00000424393 SLX4Q8IY92 1834 aa14□□□□□ -0.17
TOP3B-203ENST00000424393 TRIM28Q13263 835 aaKnown RBP14□□□□□ -0.17
TOP3B-203ENST00000424393 STYK1Q6J9G0 422 aa14□□□□□ -0.17
TOP3B-203ENST00000424393 C16orf71Q8IYS4 520 aaPredicted RBP14□□□□□ -0.17
TOP3B-203ENST00000424393 SYNE4Q8N205 404 aa14□□□□□ -0.17
TOP3B-203ENST00000424393 TTLL6Q8N841 843 aa14□□□□□ -0.17
TOP3B-203ENST00000424393 MASTLQ96GX5 879 aa14□□□□□ -0.17
TOP3B-203ENST00000424393 TRMT112Q9UI30 125 aaKnown RBP14□□□□□ -0.17
TOP3B-203ENST00000424393 CRY2Q49AN0 593 aa13.99□□□□□ -0.17
TOP3B-203ENST00000424393 SLC10A5Q5PT55 438 aa13.99□□□□□ -0.17
TOP3B-203ENST00000424393 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
TOP3B-203ENST00000424393 SH3TC1Q8TE82 1336 aa13.98□□□□□ -0.17
TOP3B-203ENST00000424393 IGKV5-2P06315 115 aa13.98□□□□□ -0.17
TOP3B-203ENST00000424393 NPR1P16066 1061 aa13.98□□□□□ -0.17
TOP3B-203ENST00000424393 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-203ENST00000424393 HCLS1P14317 486 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-203ENST00000424393 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
TOP3B-203ENST00000424393 CCDC191Q8NCU4 936 aa13.97□□□□□ -0.17
TOP3B-203ENST00000424393 SSH1Q8WYL5 1049 aa13.97□□□□□ -0.17
TOP3B-203ENST00000424393 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
TOP3B-203ENST00000424393 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
TOP3B-203ENST00000424393 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.17
TOP3B-203ENST00000424393 KIF3CO14782 793 aa13.96□□□□□ -0.17
TOP3B-203ENST00000424393 CWF19L2Q2TBE0 894 aaKnown RBP13.96□□□□□ -0.17
TOP3B-203ENST00000424393 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
TOP3B-203ENST00000424393 ARHGAP27Q6ZUM4 889 aa13.96□□□□□ -0.17
TOP3B-203ENST00000424393 DNAAF4Q8WXU2 420 aa13.96□□□□□ -0.17
TOP3B-203ENST00000424393 NLRP3Q96P20 1036 aa13.96□□□□□ -0.17
TOP3B-203ENST00000424393 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 F6X3S4 739 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 CAPN15O75808 1086 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 TOMM70O94826 608 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 PCCAP05165 728 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-203ENST00000424393 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-203ENST00000424393 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 RTL5Q5HYW3 569 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-203ENST00000424393 ZBTB38Q8NAP3 1195 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-203ENST00000424393 BCL2L13Q9BXK5 485 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 CWC25Q9NXE8 425 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-203ENST00000424393 ZNF219Q9P2Y4 722 aaPredicted RBP13.95□□□□□ -0.18
TOP3B-203ENST00000424393 SBF1O95248 1867 aa13.95□□□□□ -0.18
TOP3B-203ENST00000424393 NEURL1BA8MQ27 555 aa13.94□□□□□ -0.18
TOP3B-203ENST00000424393 C21orf2O43822 256 aa13.94□□□□□ -0.18
TOP3B-203ENST00000424393 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
TOP3B-203ENST00000424393 TAF1P21675 1872 aa13.94□□□□□ -0.18
TOP3B-203ENST00000424393 ALDH1L2Q3SY69 923 aa13.94□□□□□ -0.18
TOP3B-203ENST00000424393 C7orf43Q8WVR3 580 aa13.94□□□□□ -0.18
TOP3B-203ENST00000424393 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
TOP3B-203ENST00000424393 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
TOP3B-203ENST00000424393 IRS4O14654 1257 aaPredicted RBP13.93□□□□□ -0.18
TOP3B-203ENST00000424393 ALDH1B1P30837 517 aa13.93□□□□□ -0.18
TOP3B-203ENST00000424393 RASSF7Q02833 373 aa13.93□□□□□ -0.18
TOP3B-203ENST00000424393 LINS1Q8NG48 757 aa13.93□□□□□ -0.18
TOP3B-203ENST00000424393 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
TOP3B-203ENST00000424393 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
TOP3B-203ENST00000424393 COL4A1P02462 1669 aa13.93□□□□□ -0.18
TOP3B-203ENST00000424393 ABCC4O15439 1325 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 NFKBIEO00221 500 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 PRELPP51888 382 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 OLFM4Q6UX06 510 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 SMC4Q9NTJ3 1288 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 CCDC88AQ3V6T2 1871 aa13.92□□□□□ -0.18
TOP3B-203ENST00000424393 SNED1Q8TER0 1413 aa13.91□□□□□ -0.18
TOP3B-203ENST00000424393 H7C1W4 665 aa13.91□□□□□ -0.18
TOP3B-203ENST00000424393 GCKRQ14397 625 aa13.91□□□□□ -0.18
TOP3B-203ENST00000424393 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
TOP3B-203ENST00000424393 MYH3P11055 1940 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms