RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 SKAP1Q86WV1 359 aa16.02■□□□□ 0.15
SREBF2-202ENST00000424354 SMARCC1Q92922 1105 aaPredicted RBP16.02■□□□□ 0.15
SREBF2-202ENST00000424354 CEP152O94986 1710 aa16.02■□□□□ 0.15
SREBF2-202ENST00000424354 USO1O60763 962 aaKnown RBP16.01■□□□□ 0.15
SREBF2-202ENST00000424354 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
SREBF2-202ENST00000424354 STX6O43752 255 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 CEP135Q66GS9 1140 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 CKAP2LQ8IYA6 745 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 TRMT1Q9NXH9 659 aaKnown RBP16.01■□□□□ 0.15
SREBF2-202ENST00000424354 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 CCDC196A0A1B0GTZ2 297 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 YEATS4O95619 227 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
SREBF2-202ENST00000424354 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
SREBF2-202ENST00000424354 CPS1P31327 1500 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 SSBP05455 408 aaKnown RBP eCLIP16■□□□□ 0.15
SREBF2-202ENST00000424354 CCDC91Q7Z6B0 441 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 NUDT16Q96DE0 195 aaKnown RBP16■□□□□ 0.15
SREBF2-202ENST00000424354 DEPDC5O75140 1603 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 LAMC1P11047 1609 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 GNAT3A8MTJ3 354 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 MYL6BP14649 208 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 LUZP1Q86V48 1076 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 KRT222Q8N1A0 295 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 RALGAPBQ86X10 1494 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 FGFR1OPO95684 399 aaKnown RBP16■□□□□ 0.15
SREBF2-202ENST00000424354 TIGD1Q96MW7 591 aa16■□□□□ 0.15
SREBF2-202ENST00000424354 FSIP1Q8NA03 581 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 PPP1R12BO60237 982 aaPredicted RBP15.99■□□□□ 0.15
SREBF2-202ENST00000424354 CETN2P41208 172 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 ZMYND15Q9H091 742 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 ZNF165P49910 485 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 TMC6Q7Z403 805 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 VPS36Q86VN1 386 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
SREBF2-202ENST00000424354 TSG101Q99816 390 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 AKAP2Q9Y2D5 859 aa15.99■□□□□ 0.15
SREBF2-202ENST00000424354 PTPRCP08575 1304 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
SREBF2-202ENST00000424354 TRIM27P14373 513 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 ZHX1Q9UKY1 873 aaPredicted RBP15.98■□□□□ 0.15
SREBF2-202ENST00000424354 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 GJB2P29033 226 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 DISP3Q9P2K9 1392 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 GCOM1H8Y6P7 765 aaPredicted RBP15.98■□□□□ 0.15
SREBF2-202ENST00000424354 MYZAPP0CAP1 466 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 IFFO1Q0D2I5 559 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 CNNM3Q8NE01 707 aa15.98■□□□□ 0.15
SREBF2-202ENST00000424354 SMC1AQ14683 1233 aaKnown RBP15.97■□□□□ 0.15
SREBF2-202ENST00000424354 NUP88Q99567 741 aaPredicted RBP15.97■□□□□ 0.15
SREBF2-202ENST00000424354 PRAG1Q86YV5 1406 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 ARHGEF10O15013 1369 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 NEURL4Q96JN8 1562 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 KLHL10Q6JEL2 608 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 CACNA2D4Q7Z3S7 1137 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 XRCC6P12956 609 aaKnown RBP eCLIP15.97■□□□□ 0.153e-7■■■■■ 27
SREBF2-202ENST00000424354 NSD2O96028 1365 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 DESP17661 470 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
SREBF2-202ENST00000424354 HS1BP3Q53T59 392 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 RNF187Q5TA31 235 aaPredicted RBP15.97■□□□□ 0.15
SREBF2-202ENST00000424354 CTR9Q6PD62 1173 aa15.97■□□□□ 0.15
SREBF2-202ENST00000424354 WAPLQ7Z5K2 1190 aa15.96■□□□□ 0.15
SREBF2-202ENST00000424354 ALS2CR12Q96Q35 445 aa15.96■□□□□ 0.15
SREBF2-202ENST00000424354 TUBB4AP04350 444 aa15.96■□□□□ 0.15
SREBF2-202ENST00000424354 ATP2B2Q01814 1243 aa15.96■□□□□ 0.15
SREBF2-202ENST00000424354 RBM27Q9P2N5 1060 aaKnown RBP15.96■□□□□ 0.15
SREBF2-202ENST00000424354 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
SREBF2-202ENST00000424354 NOLC1Q14978 699 aaKnown RBP eCLIP15.96■□□□□ 0.152e-13■□□□□ 9.6
SREBF2-202ENST00000424354 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
SREBF2-202ENST00000424354 GOLGA6L10A0A0M3HER8 536 aa15.96■□□□□ 0.14
SREBF2-202ENST00000424354 IDH1O75874 414 aaKnown RBP15.95■□□□□ 0.14
SREBF2-202ENST00000424354 POTEJP0CG39 1038 aa15.95■□□□□ 0.14
SREBF2-202ENST00000424354 LMAN1P49257 510 aa15.95■□□□□ 0.14
SREBF2-202ENST00000424354 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
SREBF2-202ENST00000424354 KDM4FA0A1W2PPD8 638 aa15.95■□□□□ 0.14
SREBF2-202ENST00000424354 HDAC1Q13547 482 aaPredicted RBP15.95■□□□□ 0.14
SREBF2-202ENST00000424354 EVI5LQ96CN4 794 aa15.95■□□□□ 0.14
SREBF2-202ENST00000424354 GDPD2Q9HCC8 539 aa15.95■□□□□ 0.14
SREBF2-202ENST00000424354 LARP1Q6PKG0 1096 aaKnown RBP15.95■□□□□ 0.14
SREBF2-202ENST00000424354 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 BOLA2Q9H3K6 86 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 LRP2BPQ9P2M1 347 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 ZKSCAN5Q9Y2L8 839 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 DHX37Q8IY37 1157 aaKnown RBP15.94■□□□□ 0.14
SREBF2-202ENST00000424354 SNX21Q969T3 373 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 EHBP1Q8NDI1 1231 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 CCDC113Q9H0I3 377 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 CCDC175P0C221 793 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 PYM1Q9BRP8 204 aaKnown RBP15.94■□□□□ 0.14
SREBF2-202ENST00000424354 ZSCAN16Q9H4T2 348 aaPredicted RBP15.94■□□□□ 0.14
SREBF2-202ENST00000424354 VWDEQ8N2E2 1590 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 IGHDP01880 384 aa15.94■□□□□ 0.14
SREBF2-202ENST00000424354 IVLP07476 585 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms