RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 AK7Q96M32 723 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 TSPYL1Q9H0U9 437 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 ACEP12821 1306 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 RANBP6O60518 1105 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 MTERF4Q7Z6M4 381 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 UBXN4Q92575 508 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 SMARCE1Q969G3 411 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 TTC12Q9H892 705 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 GNL3LQ9NVN8 582 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 BRF1Q92994 677 aa12.41□□□□□ -0.42
SEMA4D-208ENST00000422704 ZNF165P49910 485 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 PTPN14Q15678 1187 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 CCDC183Q5T5S1 534 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 NAPBQ9H115 298 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 ZNHIT6Q9NWK9 470 aaKnown RBP12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 NUCB1Q02818 461 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 FSIP1Q8NA03 581 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
SEMA4D-208ENST00000422704 PDE1AP54750 535 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 SCAND2PQ9GZW5 306 aaPredicted RBP12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 CHPF2Q9P2E5 772 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 ARHGAP29Q52LW3 1261 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 SLC3A2P08195 630 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 EIF5P55010 431 aaKnown RBP12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 ZSCAN23Q3MJ62 389 aa12.39□□□□□ -0.43
SEMA4D-208ENST00000422704 IGSF3O75054 1194 aa12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 TNNT1P13805 278 aa12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 POLR3GO15318 223 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
SEMA4D-208ENST00000422704 ZNF213O14771 459 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 HSP90AB3PQ58FF7 597 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 LRRC59Q96AG4 307 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 USP16Q9Y5T5 823 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 V9GYY5 206 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 IFIT3O14879 490 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 RRP9O43818 475 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 KLHL40Q2TBA0 621 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 CWF19L2Q2TBE0 894 aaKnown RBP12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 COPS6Q7L5N1 327 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 PDCL3Q9H2J4 239 aa12.37□□□□□ -0.43
SEMA4D-208ENST00000422704 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 CCDC181Q5TID7 509 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 FAM173BQ6P4H8 233 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 USP32Q8NFA0 1604 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 VAMP4O75379 141 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 ABCC11Q96J66 1382 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 STARD3NLO95772 234 aa12.36□□□□□ -0.43
SEMA4D-208ENST00000422704 CDKL5O76039 1030 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 USP48Q86UV5 1035 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 TAX1BP1Q86VP1 789 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 VAT1LQ9HCJ6 419 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 A2ML1A8K2U0 1454 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 STIM1Q13586 685 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 PHF23Q9BUL5 403 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 SH2B1Q9NRF2 756 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 NOL7Q9UMY1 257 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-208ENST00000422704 G2E3Q7L622 706 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 NEK1Q96PY6 1258 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 ANO10Q9NW15 660 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 XAGE3Q8WTP9 111 aa12.34□□□□□ -0.43
SEMA4D-208ENST00000422704 MKNK2Q9HBH9 465 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms