RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 MAP3K15Q6ZN16 1313 aa10.73□□□□□ -0.69
TRIM43CP-201ENST00000422468 NPR1P16066 1061 aa10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 SOGA3Q5TF21 947 aa10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 PRPF40BQ6NWY9 871 aaKnown RBP10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 TTLL7Q6ZT98 887 aa10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 LRP10Q7Z4F1 713 aa10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 C16orf71Q8IYS4 520 aaPredicted RBP10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 LTBP3Q9NS15 1303 aa10.72□□□□□ -0.69
TRIM43CP-201ENST00000422468 FAM177BA6PVY3 158 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 APAF1O14727 1248 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 GTF2E1P29083 439 aaPredicted RBP10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 ANKRD36CQ5JPF3 1778 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 DCAF8Q5TAQ9 597 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 RBM46Q8TBY0 533 aaKnown RBP10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 SP7Q8TDD2 431 aaPredicted RBP10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 NYXQ9GZU5 481 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 ZBTB3Q9H5J0 574 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 RRAGCQ9HB90 399 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 CREBZFQ9NS37 354 aa10.71□□□□□ -0.69
TRIM43CP-201ENST00000422468 IBTKQ9P2D0 1353 aaPredicted RBP10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 CHL1O00533 1208 aa10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 PDIA6Q15084 440 aa10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 C7orf43Q8WVR3 580 aa10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 TAOK3Q9H2K8 898 aa10.7□□□□□ -0.7
TRIM43CP-201ENST00000422468 RIC1Q4ADV7 1423 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 ZNF853P0CG23 659 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 GPTP24298 496 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 PROSER3Q2NL68 480 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 ZNF34Q8IZ26 560 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 WDR90Q96KV7 1748 aa10.69□□□□□ -0.7
TRIM43CP-201ENST00000422468 ABCC12Q96J65 1359 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 VEGFAP15692 232 aaPredicted RBP10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 ALDH1B1P30837 517 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 APLP1P51693 650 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 FSTL1Q12841 308 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 CRY2Q49AN0 593 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 ERFEQ4G0M1 354 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 CCDC93Q567U6 631 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 LAS1LQ9Y4W2 734 aaKnown RBP10.68□□□□□ -0.7
TRIM43CP-201ENST00000422468 NTSR2O95665 410 aa10.67□□□□□ -0.7
TRIM43CP-201ENST00000422468 PARP10Q53GL7 1025 aa10.67□□□□□ -0.7
TRIM43CP-201ENST00000422468 SUSD4Q5VX71 490 aa10.67□□□□□ -0.7
TRIM43CP-201ENST00000422468 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
TRIM43CP-201ENST00000422468 MRS2Q9HD23 443 aa10.67□□□□□ -0.7
TRIM43CP-201ENST00000422468 COL4A1P02462 1669 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 ANXA1P04083 346 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 HOXB7P09629 217 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 HOXA10P31260 410 aaPredicted RBP10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 GSE1Q14687 1217 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 COPS6Q7L5N1 327 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 NECTIN2Q92692 538 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 RPGRQ92834 1020 aaKnown RBP10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 CFAP44Q96MT7 982 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 DDX21Q9NR30 783 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 LAMB2P55268 1798 aa10.66□□□□□ -0.7
TRIM43CP-201ENST00000422468 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 POTECB2RU33 542 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 AIMP1Q12904 312 aaKnown RBP10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 HSP90AB3PQ58FF7 597 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 OLFM4Q6UX06 510 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 SLC51AQ86UW1 340 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 UTP14AQ9BVJ6 771 aaKnown RBP10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 MBIPQ9NS73 344 aa10.65□□□□□ -0.7
TRIM43CP-201ENST00000422468 SCN4AP35499 1836 aa10.65□□□□□ -0.71
TRIM43CP-201ENST00000422468 ZNF521Q96K83 1311 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 CALD1Q05682 793 aaKnown RBP10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 HDGFL1Q5TGJ6 251 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 RBM17Q96I25 401 aaKnown RBP10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 CRAMP1Q96RY5 1269 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 CHPF2Q9P2E5 772 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 SNED1Q8TER0 1413 aa10.64□□□□□ -0.71
TRIM43CP-201ENST00000422468 ANP32CO43423 234 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 GRIPAP1Q4V328 841 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 C3orf67Q6ZVT6 689 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 NLRP10Q86W26 655 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 DNAJC5GQ8N7S2 189 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 C8orf58Q8NAV2 365 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 NLRP3Q96P20 1036 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 PSMD1Q99460 953 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 ZNF277Q9NRM2 450 aaPredicted RBP10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 HYPKQ9NX55 129 aa10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 DBF4Q9UBU7 674 aaPredicted RBP10.63□□□□□ -0.71
TRIM43CP-201ENST00000422468 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
TRIM43CP-201ENST00000422468 DDNO94850 711 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms