RNA–Protein interactions for RNA: ENST00000422366.5

HCG25-217, Transcript of HLA complex group 25, humanhuman

TSL 3 BASIC

Gene HCG25, Length 702 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-217ENST00000422366 TAF1DQ9H5J8 278 aaPredicted RBP9.35□□□□□ -0.91
HCG25-217ENST00000422366 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
HCG25-217ENST00000422366 ZNF330Q9Y3S2 320 aaPredicted RBP9.35□□□□□ -0.91
HCG25-217ENST00000422366 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 FANCIQ9NVI1 1328 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 NUP98P52948 1817 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 A0A087WZG4 1122 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 STARD3NLO95772 234 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 SRGNP10124 158 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
HCG25-217ENST00000422366 LBX1P52954 281 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 KRT24Q2M2I5 525 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 STYK1Q6J9G0 422 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 TRMT2AQ8IZ69 625 aaKnown RBP9.34□□□□□ -0.91
HCG25-217ENST00000422366 AIDAQ96BJ3 306 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 L3MBTL3Q96JM7 780 aaPredicted RBP9.34□□□□□ -0.91
HCG25-217ENST00000422366 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
HCG25-217ENST00000422366 COL4A5P29400 1685 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 PRAMEF22A3QJZ6 481 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 IQCA1LA6NCM1 817 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 E9PSI1 815 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 CAMTA2O94983 1202 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 EAPPQ56P03 285 aaPredicted RBP9.33□□□□□ -0.92
HCG25-217ENST00000422366 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 C7orf43Q8WVR3 580 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 YTHDC1Q96MU7 727 aaKnown RBP9.33□□□□□ -0.92
HCG25-217ENST00000422366 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
HCG25-217ENST00000422366 CASP8AP2Q9UKL3 1982 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 A1BGP04217 495 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 SNRPA1P09661 255 aaKnown RBP9.32□□□□□ -0.92
HCG25-217ENST00000422366 HSPA8P11142 646 aaKnown RBP9.32□□□□□ -0.92
HCG25-217ENST00000422366 IL6STP40189 918 aaPredicted RBP9.32□□□□□ -0.92
HCG25-217ENST00000422366 FAM161AQ3B820 660 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 DUSP27Q5VZP5 1158 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 OLFM4Q6UX06 510 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 MASTLQ96GX5 879 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
HCG25-217ENST00000422366 RASSF10A6NK89 507 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 PIP4K2AP48426 406 aaPredicted RBP9.31□□□□□ -0.92
HCG25-217ENST00000422366 ST5P78524 1137 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 EXOSC9Q06265 439 aaKnown RBP9.31□□□□□ -0.92
HCG25-217ENST00000422366 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 SETDB2Q96T68 719 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
HCG25-217ENST00000422366 ZNF277Q9NRM2 450 aaPredicted RBP9.31□□□□□ -0.92
HCG25-217ENST00000422366 SNED1Q8TER0 1413 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 RNF123Q5XPI4 1314 aa9.31□□□□□ -0.92
HCG25-217ENST00000422366 ELL2O00472 640 aaPredicted RBP9.3□□□□□ -0.92
HCG25-217ENST00000422366 NPHP1O15259 732 aa9.3□□□□□ -0.92
HCG25-217ENST00000422366 HOXB7P09629 217 aa9.3□□□□□ -0.92
HCG25-217ENST00000422366 EPHX2P34913 555 aa9.3□□□□□ -0.92
HCG25-217ENST00000422366 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
HCG25-217ENST00000422366 DEFB115Q30KQ5 88 aa9.3□□□□□ -0.92
HCG25-217ENST00000422366 CCDC93Q567U6 631 aa9.3□□□□□ -0.92
HCG25-217ENST00000422366 MAP1SQ66K74 1059 aaPredicted RBP9.3□□□□□ -0.92
HCG25-217ENST00000422366 DZIP3Q86Y13 1208 aaKnown RBP9.3□□□□□ -0.92
HCG25-217ENST00000422366 HACL1Q9UJ83 578 aa9.3□□□□□ -0.92
HCG25-217ENST00000422366 TNRC18O15417 2968 aaPredicted RBP9.3□□□□□ -0.92
HCG25-217ENST00000422366 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
HCG25-217ENST00000422366 VAMP4O75379 141 aa9.29□□□□□ -0.92
HCG25-217ENST00000422366 TWISTNBQ3B726 338 aaPredicted RBP9.29□□□□□ -0.92
HCG25-217ENST00000422366 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
HCG25-217ENST00000422366 ANKRD36CQ5JPF3 1778 aa9.29□□□□□ -0.92
HCG25-217ENST00000422366 LAMB2P55268 1798 aa9.28□□□□□ -0.92
HCG25-217ENST00000422366 NPR1P16066 1061 aa9.28□□□□□ -0.92
HCG25-217ENST00000422366 EIF2S2P20042 333 aaKnown RBP9.28□□□□□ -0.92
HCG25-217ENST00000422366 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
HCG25-217ENST00000422366 NBPF5PQ86XG9 351 aaPredicted RBP9.28□□□□□ -0.92
HCG25-217ENST00000422366 CNTROBQ8N137 903 aa9.28□□□□□ -0.92
HCG25-217ENST00000422366 KLRG2A4D1S0 409 aaPredicted RBP9.27□□□□□ -0.93
HCG25-217ENST00000422366 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 FZD9O00144 591 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 IARSP41252 1262 aaKnown RBP9.27□□□□□ -0.93
HCG25-217ENST00000422366 MAP2K1Q02750 393 aaPredicted RBP9.27□□□□□ -0.93
HCG25-217ENST00000422366 PDIA6Q15084 440 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 HDGFL1Q5TGJ6 251 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.93
HCG25-217ENST00000422366 PNMA8AQ86V59 439 aaPredicted RBP9.27□□□□□ -0.93
HCG25-217ENST00000422366 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 ABT1Q9ULW3 272 aaKnown RBP9.27□□□□□ -0.93
HCG25-217ENST00000422366 ERBB4Q15303 1308 aa9.27□□□□□ -0.93
HCG25-217ENST00000422366 LRP10Q7Z4F1 713 aa9.26□□□□□ -0.93
HCG25-217ENST00000422366 SLC51AQ86UW1 340 aa9.26□□□□□ -0.93
HCG25-217ENST00000422366 RTKN2Q8IZC4 609 aa9.26□□□□□ -0.93
HCG25-217ENST00000422366 GPC2Q8N158 579 aa9.26□□□□□ -0.93
HCG25-217ENST00000422366 SYNE4Q8N205 404 aa9.26□□□□□ -0.93
HCG25-217ENST00000422366 DDX21Q9NR30 783 aaKnown RBP eCLIP9.26□□□□□ -0.93
HCG25-217ENST00000422366 POLR2AP24928 1970 aaKnown RBP9.26□□□□□ -0.93
HCG25-217ENST00000422366 TAF1P21675 1872 aa9.25□□□□□ -0.93
HCG25-217ENST00000422366 ABCC12Q96J65 1359 aa9.25□□□□□ -0.93
HCG25-217ENST00000422366 PDE4DIPQ5VU43 2346 aa9.25□□□□□ -0.93
HCG25-217ENST00000422366 CCDC85CA6NKD9 419 aa9.25□□□□□ -0.93
HCG25-217ENST00000422366 FAM177BA6PVY3 158 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms