RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 GPRC5DQ9NZD1 345 aa7.83□□□□□ -1.16
HDAC8-212ENST00000421523 ZNF330Q9Y3S2 320 aaPredicted RBP7.83□□□□□ -1.16
HDAC8-212ENST00000421523 TBC1D8O95759 1140 aa7.82□□□□□ -1.16
HDAC8-212ENST00000421523 HSP90AB1P08238 724 aaKnown RBP7.82□□□□□ -1.16
HDAC8-212ENST00000421523 CYP19A1P11511 503 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-212ENST00000421523 EN2P19622 333 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-212ENST00000421523 TRIM26Q12899 539 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-212ENST00000421523 ZNF530Q6P9A1 599 aaPredicted RBP7.82□□□□□ -1.16
HDAC8-212ENST00000421523 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
HDAC8-212ENST00000421523 RBM27Q9P2N5 1060 aaKnown RBP7.82□□□□□ -1.16
HDAC8-212ENST00000421523 SLC10A3P09131 477 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 NPR1P16066 1061 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 MTHFSP49914 203 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 CDC37L1Q7L3B6 337 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 GBA2Q9HCG7 927 aaPredicted RBP7.81□□□□□ -1.16
HDAC8-212ENST00000421523 RBBP6Q7Z6E9 1792 aaKnown RBP7.81□□□□□ -1.16
HDAC8-212ENST00000421523 KIF24Q5T7B8 1368 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 PRUNE2Q8WUY3 3088 aa7.81□□□□□ -1.16
HDAC8-212ENST00000421523 GMPSP49915 693 aaPredicted RBP7.8□□□□□ -1.16
HDAC8-212ENST00000421523 C2orf69Q8N8R5 385 aa7.8□□□□□ -1.16
HDAC8-212ENST00000421523 TRPM4Q8TD43 1214 aa7.8□□□□□ -1.16
HDAC8-212ENST00000421523 SETDB2Q96T68 719 aa7.8□□□□□ -1.16
HDAC8-212ENST00000421523 CARD14Q9BXL6 1004 aa7.8□□□□□ -1.16
HDAC8-212ENST00000421523 TBC1D2BQ9UPU7 963 aa7.8□□□□□ -1.16
HDAC8-212ENST00000421523 KIF20BQ96Q89 1820 aa7.8□□□□□ -1.16
HDAC8-212ENST00000421523 MUC3AQ02505 3323 aa7.79□□□□□ -1.16
HDAC8-212ENST00000421523 GPR25O00155 361 aa7.79□□□□□ -1.16
HDAC8-212ENST00000421523 HIRAP54198 1017 aaPredicted RBP7.79□□□□□ -1.16
HDAC8-212ENST00000421523 SLC51AQ86UW1 340 aa7.79□□□□□ -1.16
HDAC8-212ENST00000421523 NIM1KQ8IY84 436 aa7.79□□□□□ -1.16
HDAC8-212ENST00000421523 PSMD1Q99460 953 aa7.79□□□□□ -1.16
HDAC8-212ENST00000421523 TIMELESSQ9UNS1 1208 aa7.79□□□□□ -1.16
HDAC8-212ENST00000421523 LAMA2P24043 3122 aaKnown RBP7.79□□□□□ -1.16
HDAC8-212ENST00000421523 SHTN1A0MZ66 631 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 ADM5C9JUS6 153 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 SLC39A6Q13433 755 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 C1orf141Q5JVX7 400 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
HDAC8-212ENST00000421523 NBPF5PQ86XG9 351 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-212ENST00000421523 RASAL3Q86YV0 1011 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 PGAP2Q9UHJ9 254 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 SNED1Q8TER0 1413 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
HDAC8-212ENST00000421523 NPC1L1Q9UHC9 1359 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 A0A087WZG4 1122 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 SOX1O00570 391 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-212ENST00000421523 FKTNO75072 461 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 PLEKHO1Q53GL0 409 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-212ENST00000421523 KRT26Q7Z3Y9 468 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 ZC3H15Q8WU90 426 aaKnown RBP7.77□□□□□ -1.17
HDAC8-212ENST00000421523 LRCH3Q96II8 777 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 BCL2L13Q9BXK5 485 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 PRDM6Q9NQX0 595 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 TRIM17Q9Y577 477 aa7.77□□□□□ -1.17
HDAC8-212ENST00000421523 FAM177BA6PVY3 158 aa7.76□□□□□ -1.17
HDAC8-212ENST00000421523 TCERG1O14776 1098 aaKnown RBP7.76□□□□□ -1.17
HDAC8-212ENST00000421523 PPIP5K2O43314 1243 aa7.76□□□□□ -1.17
HDAC8-212ENST00000421523 EIF5P55010 431 aaKnown RBP7.76□□□□□ -1.17
HDAC8-212ENST00000421523 AOC3Q16853 763 aa7.76□□□□□ -1.17
HDAC8-212ENST00000421523 RAPGEFL1Q9UHV5 662 aa7.76□□□□□ -1.17
HDAC8-212ENST00000421523 CLSPNQ9HAW4 1339 aa7.76□□□□□ -1.17
HDAC8-212ENST00000421523 MYCP01106 439 aaPredicted RBP7.75□□□□□ -1.17
HDAC8-212ENST00000421523 COL9A1P20849 921 aa7.75□□□□□ -1.17
HDAC8-212ENST00000421523 CXCL9Q07325 125 aa7.75□□□□□ -1.17
HDAC8-212ENST00000421523 MKRN3Q13064 507 aaKnown RBP7.75□□□□□ -1.17
HDAC8-212ENST00000421523 EIF4A2Q14240 407 aaKnown RBP7.75□□□□□ -1.17
HDAC8-212ENST00000421523 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
HDAC8-212ENST00000421523 REM2Q8IYK8 340 aaPredicted RBP7.75□□□□□ -1.17
HDAC8-212ENST00000421523 R3HDMLQ9H3Y0 253 aa7.75□□□□□ -1.17
HDAC8-212ENST00000421523 NPM3O75607 178 aaKnown RBP7.74□□□□□ -1.17
HDAC8-212ENST00000421523 RAD17O75943 681 aa7.74□□□□□ -1.17
HDAC8-212ENST00000421523 ALDH1B1P30837 517 aa7.74□□□□□ -1.17
HDAC8-212ENST00000421523 OTOP1Q7RTM1 612 aa7.74□□□□□ -1.17
HDAC8-212ENST00000421523 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.74□□□□□ -1.17
HDAC8-212ENST00000421523 MICALL2Q8IY33 904 aa7.74□□□□□ -1.17
HDAC8-212ENST00000421523 TMEM106CQ9BVX2 250 aa7.74□□□□□ -1.17
HDAC8-212ENST00000421523 CAMTA2O94983 1202 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 STARD3NLO95772 234 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 TNNT2P45379 298 aaPredicted RBP7.73□□□□□ -1.17
HDAC8-212ENST00000421523 TBC1D10BQ4KMP7 808 aaPredicted RBP7.73□□□□□ -1.17
HDAC8-212ENST00000421523 AMOTQ4VCS5 1084 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 Q7L0L9 218 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 SAMD7Q7Z3H4 446 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 NPM2Q86SE8 214 aaKnown RBP7.73□□□□□ -1.17
HDAC8-212ENST00000421523 DEFB123Q8N688 67 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 DPF3Q92784 378 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 DCPSQ96C86 337 aaKnown RBP7.73□□□□□ -1.17
HDAC8-212ENST00000421523 SLC52A2Q9HAB3 445 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 CNOT7Q9UIV1 285 aaKnown RBP7.73□□□□□ -1.17
HDAC8-212ENST00000421523 ZNRF3Q9ULT6 936 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 MRC1P22897 1456 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 TTC28Q96AY4 2481 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 CDHR2Q9BYE9 1310 aa7.73□□□□□ -1.17
HDAC8-212ENST00000421523 LAMB4A4D0S4 1761 aa7.72□□□□□ -1.17
HDAC8-212ENST00000421523 POLR2AP24928 1970 aaKnown RBP7.72□□□□□ -1.17
HDAC8-212ENST00000421523 KLRG2A4D1S0 409 aaPredicted RBP7.72□□□□□ -1.17
HDAC8-212ENST00000421523 H7C1D1 291 aa7.72□□□□□ -1.17
HDAC8-212ENST00000421523 EGFRP00533 1210 aa7.72□□□□□ -1.17
HDAC8-212ENST00000421523 SLC4A8Q2Y0W8 1093 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms