RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 L3MBTL3Q96JM7 780 aaPredicted RBP24.76■■□□□ 1.55
VARS2-202ENST00000421263 PRKRIP1Q9H875 184 aaPredicted RBP24.76■■□□□ 1.55
VARS2-202ENST00000421263 ZNF277Q9NRM2 450 aaPredicted RBP24.76■■□□□ 1.55
VARS2-202ENST00000421263 IFFO2Q5TF58 517 aa24.75■■□□□ 1.55
VARS2-202ENST00000421263 CC2D2BQ6DHV5 1058 aa24.75■■□□□ 1.55
VARS2-202ENST00000421263 SYNE4Q8N205 404 aa24.75■■□□□ 1.55
VARS2-202ENST00000421263 CRAMP1Q96RY5 1269 aa24.75■■□□□ 1.55
VARS2-202ENST00000421263 PSMD1Q99460 953 aa24.75■■□□□ 1.55
VARS2-202ENST00000421263 COPS6Q7L5N1 327 aa24.74■■□□□ 1.55
VARS2-202ENST00000421263 DDX21Q9NR30 783 aaKnown RBP eCLIP24.74■■□□□ 1.55
VARS2-202ENST00000421263 FZD9O00144 591 aa24.73■■□□□ 1.55
VARS2-202ENST00000421263 IARSP41252 1262 aaKnown RBP24.73■■□□□ 1.55
VARS2-202ENST00000421263 KRT24Q2M2I5 525 aa24.73■■□□□ 1.55
VARS2-202ENST00000421263 RPGRQ92834 1020 aaKnown RBP24.73■■□□□ 1.55
VARS2-202ENST00000421263 GRIPAP1Q4V328 841 aa24.72■■□□□ 1.55
VARS2-202ENST00000421263 C3orf67Q6ZVT6 689 aa24.72■■□□□ 1.55
VARS2-202ENST00000421263 RBM17Q96I25 401 aaKnown RBP24.72■■□□□ 1.55
VARS2-202ENST00000421263 IQCA1LA6NCM1 817 aa24.71■■□□□ 1.55
VARS2-202ENST00000421263 CHADLQ6NUI6 762 aa24.71■■□□□ 1.55
VARS2-202ENST00000421263 XAGE3Q8WTP9 111 aa24.71■■□□□ 1.55
VARS2-202ENST00000421263 NECTIN2Q92692 538 aa24.71■■□□□ 1.55
VARS2-202ENST00000421263 NLRP3Q96P20 1036 aa24.71■■□□□ 1.55
VARS2-202ENST00000421263 UTP14AQ9BVJ6 771 aaKnown RBP24.71■■□□□ 1.55
VARS2-202ENST00000421263 ZNF541Q9H0D2 1346 aa24.7■■□□□ 1.54
VARS2-202ENST00000421263 POTEIP0CG38 1075 aa24.7■■□□□ 1.54
VARS2-202ENST00000421263 POTEJP0CG39 1038 aa24.7■■□□□ 1.54
VARS2-202ENST00000421263 HSP90AB3PQ58FF7 597 aa24.7■■□□□ 1.54
VARS2-202ENST00000421263 SCN4AP35499 1836 aa24.7■■□□□ 1.54
VARS2-202ENST00000421263 RNF123Q5XPI4 1314 aa24.69■■□□□ 1.54
VARS2-202ENST00000421263 HOXB7P09629 217 aa24.69■■□□□ 1.54
VARS2-202ENST00000421263 TCIRG1Q13488 830 aa24.69■■□□□ 1.54
VARS2-202ENST00000421263 CFAP44Q96MT7 982 aa24.69■■□□□ 1.54
VARS2-202ENST00000421263 TAF1DQ9H5J8 278 aaPredicted RBP24.69■■□□□ 1.54
VARS2-202ENST00000421263 LAS1LQ9Y4W2 734 aaKnown RBP24.69■■□□□ 1.54
VARS2-202ENST00000421263 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
VARS2-202ENST00000421263 NLRP10Q86W26 655 aa24.68■■□□□ 1.54
VARS2-202ENST00000421263 PPEF1O14829 653 aaPredicted RBP24.66■■□□□ 1.54
VARS2-202ENST00000421263 ZNF853P0CG23 659 aa24.66■■□□□ 1.54
VARS2-202ENST00000421263 CHPF2Q9P2E5 772 aa24.66■■□□□ 1.54
VARS2-202ENST00000421263 LDHDQ86WU2 507 aa24.65■■□□□ 1.54
VARS2-202ENST00000421263 JDP2Q8WYK2 163 aa24.65■■□□□ 1.54
VARS2-202ENST00000421263 ANKRD36CQ5JPF3 1778 aa24.65■■□□□ 1.54
VARS2-202ENST00000421263 HDGFL1Q5TGJ6 251 aa24.64■■□□□ 1.54
VARS2-202ENST00000421263 SLC51AQ86UW1 340 aa24.64■■□□□ 1.54
VARS2-202ENST00000421263 GPC2Q8N158 579 aa24.64■■□□□ 1.54
VARS2-202ENST00000421263 DBF4Q9UBU7 674 aaPredicted RBP24.64■■□□□ 1.54
VARS2-202ENST00000421263 HACL1Q9UJ83 578 aa24.64■■□□□ 1.54
VARS2-202ENST00000421263 ATP6V0A2Q9Y487 856 aa24.64■■□□□ 1.54
VARS2-202ENST00000421263 COL4A5P29400 1685 aa24.64■■□□□ 1.53
VARS2-202ENST00000421263 PCNTO95613 3336 aa24.64■■□□□ 1.53
VARS2-202ENST00000421263 PLBD2Q8NHP8 589 aa24.63■■□□□ 1.53
VARS2-202ENST00000421263 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
VARS2-202ENST00000421263 PASKQ96RG2 1323 aa24.62■■□□□ 1.53
VARS2-202ENST00000421263 APAF1O14727 1248 aa24.62■■□□□ 1.53
VARS2-202ENST00000421263 DUSP27Q5VZP5 1158 aa24.62■■□□□ 1.53
VARS2-202ENST00000421263 ANKRD13DQ6ZTN6 518 aa24.62■■□□□ 1.53
VARS2-202ENST00000421263 VPS33BQ9H267 617 aa24.62■■□□□ 1.53
VARS2-202ENST00000421263 TRMT112Q9UI30 125 aaKnown RBP24.62■■□□□ 1.53
VARS2-202ENST00000421263 TCERG1O14776 1098 aaKnown RBP24.61■■□□□ 1.53
VARS2-202ENST00000421263 BBOX1O75936 387 aa24.61■■□□□ 1.53
VARS2-202ENST00000421263 HCLS1P14317 486 aaPredicted RBP24.61■■□□□ 1.53
VARS2-202ENST00000421263 EPHX2P34913 555 aa24.61■■□□□ 1.53
VARS2-202ENST00000421263 CREBZFQ9NS37 354 aa24.61■■□□□ 1.53
VARS2-202ENST00000421263 ABCC4O15439 1325 aa24.61■■□□□ 1.53
VARS2-202ENST00000421263 SH3TC1Q8TE82 1336 aa24.61■■□□□ 1.53
VARS2-202ENST00000421263 ITGBL1O95965 494 aaPredicted RBP24.6■■□□□ 1.53
VARS2-202ENST00000421263 ISCA1Q9BUE6 129 aa24.6■■□□□ 1.53
VARS2-202ENST00000421263 EIF6P56537 245 aaKnown RBP24.59■■□□□ 1.53
VARS2-202ENST00000421263 PNMA8AQ86V59 439 aaPredicted RBP24.59■■□□□ 1.53
VARS2-202ENST00000421263 SP8Q8IXZ3 490 aa24.59■■□□□ 1.53
VARS2-202ENST00000421263 LARGE2Q8N3Y3 721 aa24.59■■□□□ 1.53
VARS2-202ENST00000421263 RTFDC1Q9BY42 306 aaPredicted RBP24.59■■□□□ 1.53
VARS2-202ENST00000421263 HYPKQ9NX55 129 aa24.59■■□□□ 1.53
VARS2-202ENST00000421263 LAMB2P55268 1798 aa24.59■■□□□ 1.53
VARS2-202ENST00000421263 ADAMTSL1Q8N6G6 1762 aa24.59■■□□□ 1.53
VARS2-202ENST00000421263 IFT57Q9NWB7 429 aa24.58■■□□□ 1.53
VARS2-202ENST00000421263 EAPPQ56P03 285 aaPredicted RBP24.57■■□□□ 1.52
VARS2-202ENST00000421263 TMX4Q9H1E5 349 aaPredicted RBP24.57■■□□□ 1.52
VARS2-202ENST00000421263 GNAI1P63096 354 aa24.56■■□□□ 1.52
VARS2-202ENST00000421263 TRIM28Q13263 835 aaKnown RBP24.56■■□□□ 1.52
VARS2-202ENST00000421263 CALD1Q05682 793 aaKnown RBP24.55■■□□□ 1.52
VARS2-202ENST00000421263 GRAPQ13588 217 aa24.55■■□□□ 1.52
VARS2-202ENST00000421263 DDX46Q7L014 1031 aaKnown RBP24.55■■□□□ 1.52
VARS2-202ENST00000421263 SUPT20HQ8NEM7 779 aa24.55■■□□□ 1.52
VARS2-202ENST00000421263 GRAPLQ8TC17 118 aaPredicted RBP24.55■■□□□ 1.52
VARS2-202ENST00000421263 GJA3Q9Y6H8 435 aa24.55■■□□□ 1.52
VARS2-202ENST00000421263 PPIP5K2O43314 1243 aa24.54■■□□□ 1.52
VARS2-202ENST00000421263 AOC3Q16853 763 aa24.54■■□□□ 1.52
VARS2-202ENST00000421263 NIM1KQ8IY84 436 aa24.54■■□□□ 1.52
VARS2-202ENST00000421263 ATP5J2-PTCD1G3V325 749 aa24.53■■□□□ 1.52
VARS2-202ENST00000421263 SCNN1DP51172 638 aa24.53■■□□□ 1.52
VARS2-202ENST00000421263 SF3B3Q15393 1217 aaKnown RBP24.53■■□□□ 1.52
VARS2-202ENST00000421263 MPNDQ8N594 471 aa24.53■■□□□ 1.52
VARS2-202ENST00000421263 CLEC11AQ9Y240 323 aa24.53■■□□□ 1.52
VARS2-202ENST00000421263 LTBP1Q14766 1721 aa24.52■■□□□ 1.52
VARS2-202ENST00000421263 DPP8Q6V1X1 898 aaPredicted RBP24.52■■□□□ 1.52
VARS2-202ENST00000421263 TMC4Q7Z404 712 aa24.52■■□□□ 1.52
VARS2-202ENST00000421263 CNTROBQ8N137 903 aa24.52■■□□□ 1.52
VARS2-202ENST00000421263 FAM89AQ96GI7 184 aa24.52■■□□□ 1.52
VARS2-202ENST00000421263 EPS15P42566 896 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms