RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RIC1Q4ADV7 1423 aa22.3■■□□□ 1.16
UPF3AP3-201ENST00000420996 RNF123Q5XPI4 1314 aa22.29■■□□□ 1.16
UPF3AP3-201ENST00000420996 MYL6BP14649 208 aa22.28■■□□□ 1.16
UPF3AP3-201ENST00000420996 GRIPAP1Q4V328 841 aa22.28■■□□□ 1.16
UPF3AP3-201ENST00000420996 RPGRQ92834 1020 aaKnown RBP22.28■■□□□ 1.16
UPF3AP3-201ENST00000420996 THUMPD2Q9BTF0 503 aaKnown RBP22.28■■□□□ 1.16
UPF3AP3-201ENST00000420996 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
UPF3AP3-201ENST00000420996 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
UPF3AP3-201ENST00000420996 GPTP24298 496 aa22.27■■□□□ 1.16
UPF3AP3-201ENST00000420996 SUSD4Q5VX71 490 aa22.27■■□□□ 1.16
UPF3AP3-201ENST00000420996 ZNF34Q8IZ26 560 aa22.27■■□□□ 1.16
UPF3AP3-201ENST00000420996 ZBTB3Q9H5J0 574 aa22.27■■□□□ 1.16
UPF3AP3-201ENST00000420996 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
UPF3AP3-201ENST00000420996 EIF6P56537 245 aaKnown RBP22.26■■□□□ 1.15
UPF3AP3-201ENST00000420996 CRAMP1Q96RY5 1269 aa22.26■■□□□ 1.15
UPF3AP3-201ENST00000420996 VEGFBP49765 207 aa22.25■■□□□ 1.15
UPF3AP3-201ENST00000420996 GIGYF2Q6Y7W6 1299 aaKnown RBP22.25■■□□□ 1.15
UPF3AP3-201ENST00000420996 CNTROBQ8N137 903 aa22.25■■□□□ 1.15
UPF3AP3-201ENST00000420996 RBM17Q96I25 401 aaKnown RBP22.25■■□□□ 1.15
UPF3AP3-201ENST00000420996 MAPK8IP3Q9UPT6 1336 aa22.25■■□□□ 1.15
UPF3AP3-201ENST00000420996 FOXN1O15353 648 aa22.24■■□□□ 1.15
UPF3AP3-201ENST00000420996 NTSR2O95665 410 aa22.24■■□□□ 1.15
UPF3AP3-201ENST00000420996 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
UPF3AP3-201ENST00000420996 COL4A5P29400 1685 aa22.23■■□□□ 1.15
UPF3AP3-201ENST00000420996 PPP1R42Q7Z4L9 355 aa22.23■■□□□ 1.15
UPF3AP3-201ENST00000420996 GJA3Q9Y6H8 435 aa22.23■■□□□ 1.15
UPF3AP3-201ENST00000420996 PARP10Q53GL7 1025 aa22.22■■□□□ 1.15
UPF3AP3-201ENST00000420996 PRDM10Q9NQV6 1147 aa22.22■■□□□ 1.15
UPF3AP3-201ENST00000420996 RASSF10A6NK89 507 aa22.21■■□□□ 1.15
UPF3AP3-201ENST00000420996 PPEF1O14829 653 aaPredicted RBP22.21■■□□□ 1.15
UPF3AP3-201ENST00000420996 LMOD1P29536 600 aaPredicted RBP22.21■■□□□ 1.15
UPF3AP3-201ENST00000420996 LARGE2Q8N3Y3 721 aa22.21■■□□□ 1.15
UPF3AP3-201ENST00000420996 AIDAQ96BJ3 306 aa22.21■■□□□ 1.15
UPF3AP3-201ENST00000420996 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
UPF3AP3-201ENST00000420996 DEFB115Q30KQ5 88 aa22.2■■□□□ 1.14
UPF3AP3-201ENST00000420996 LRP10Q7Z4F1 713 aa22.2■■□□□ 1.14
UPF3AP3-201ENST00000420996 NLRP3Q96P20 1036 aa22.2■■□□□ 1.14
UPF3AP3-201ENST00000420996 LTBP1Q14766 1721 aa22.2■■□□□ 1.14
UPF3AP3-201ENST00000420996 CTCFP49711 727 aaPredicted RBP22.19■■□□□ 1.14
UPF3AP3-201ENST00000420996 PDIA6Q15084 440 aa22.19■■□□□ 1.14
UPF3AP3-201ENST00000420996 SLC10A5Q5PT55 438 aa22.19■■□□□ 1.14
UPF3AP3-201ENST00000420996 C3orf67Q6ZVT6 689 aa22.19■■□□□ 1.14
UPF3AP3-201ENST00000420996 WBP1LQ9NX94 342 aa22.19■■□□□ 1.14
UPF3AP3-201ENST00000420996 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
UPF3AP3-201ENST00000420996 EIF2S2P20042 333 aaKnown RBP22.18■■□□□ 1.14
UPF3AP3-201ENST00000420996 SCNN1DP51172 638 aa22.18■■□□□ 1.14
UPF3AP3-201ENST00000420996 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
UPF3AP3-201ENST00000420996 VPS33BQ9H267 617 aa22.18■■□□□ 1.14
UPF3AP3-201ENST00000420996 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
UPF3AP3-201ENST00000420996 EPS15P42566 896 aa22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 RIPK4P57078 832 aa22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 SLC51AQ86UW1 340 aa22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 NIM1KQ8IY84 436 aa22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 TMX4Q9H1E5 349 aaPredicted RBP22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 ATP6V0A2Q9Y487 856 aa22.17■■□□□ 1.14
UPF3AP3-201ENST00000420996 USP50Q70EL3 339 aaPredicted RBP22.16■■□□□ 1.14
UPF3AP3-201ENST00000420996 ANKRD36CQ5JPF3 1778 aa22.15■■□□□ 1.14
UPF3AP3-201ENST00000420996 PPIP5K2O43314 1243 aa22.15■■□□□ 1.14
UPF3AP3-201ENST00000420996 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
UPF3AP3-201ENST00000420996 ABT1Q9ULW3 272 aaKnown RBP22.15■■□□□ 1.14
UPF3AP3-201ENST00000420996 WDR33Q9C0J8 1336 aaKnown RBP22.14■■□□□ 1.14
UPF3AP3-201ENST00000420996 TRPM7Q96QT4 1865 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 ABCC4O15439 1325 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 LAMB2P55268 1798 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 ANXA1P04083 346 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 LMOD3Q0VAK6 560 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 AOC3Q16853 763 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 HSP90AB3PQ58FF7 597 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 SUPT20HQ8NEM7 779 aa22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 RTFDC1Q9BY42 306 aaPredicted RBP22.13■■□□□ 1.13
UPF3AP3-201ENST00000420996 BBOX1O75936 387 aa22.12■■□□□ 1.13
UPF3AP3-201ENST00000420996 TMPOP42166 694 aaKnown RBP22.12■■□□□ 1.13
UPF3AP3-201ENST00000420996 LBX1P52954 281 aa22.12■■□□□ 1.13
UPF3AP3-201ENST00000420996 MAP2K1Q02750 393 aaPredicted RBP22.12■■□□□ 1.13
UPF3AP3-201ENST00000420996 COPS6Q7L5N1 327 aa22.12■■□□□ 1.13
UPF3AP3-201ENST00000420996 NLRP10Q86W26 655 aa22.11■■□□□ 1.13
UPF3AP3-201ENST00000420996 SP8Q8IXZ3 490 aa22.11■■□□□ 1.13
UPF3AP3-201ENST00000420996 GPRC5DQ9NZD1 345 aa22.11■■□□□ 1.13
UPF3AP3-201ENST00000420996 ZNRF3Q9ULT6 936 aa22.11■■□□□ 1.13
UPF3AP3-201ENST00000420996 FMR1Q06787 632 aaKnown RBP eCLIP22.1■■□□□ 1.13
UPF3AP3-201ENST00000420996 CXCL9Q07325 125 aa22.1■■□□□ 1.13
UPF3AP3-201ENST00000420996 RALBP1Q15311 655 aa22.1■■□□□ 1.13
UPF3AP3-201ENST00000420996 XAGE3Q8WTP9 111 aa22.1■■□□□ 1.13
UPF3AP3-201ENST00000420996 ADARB2Q9NS39 739 aaKnown RBP22.1■■□□□ 1.13
UPF3AP3-201ENST00000420996 AIMP1Q12904 312 aaKnown RBP22.09■■□□□ 1.13
UPF3AP3-201ENST00000420996 TCIRG1Q13488 830 aa22.09■■□□□ 1.13
UPF3AP3-201ENST00000420996 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
UPF3AP3-201ENST00000420996 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
UPF3AP3-201ENST00000420996 HSPA8P11142 646 aaKnown RBP22.08■■□□□ 1.13
UPF3AP3-201ENST00000420996 HCLS1P14317 486 aaPredicted RBP22.08■■□□□ 1.13
UPF3AP3-201ENST00000420996 ECE1P42892 770 aa22.08■■□□□ 1.13
UPF3AP3-201ENST00000420996 CST9Q5W186 159 aa22.08■■□□□ 1.13
UPF3AP3-201ENST00000420996 MPNDQ8N594 471 aa22.08■■□□□ 1.13
UPF3AP3-201ENST00000420996 TRMT112Q9UI30 125 aaKnown RBP22.08■■□□□ 1.13
UPF3AP3-201ENST00000420996 THSD7BQ9C0I4 1608 aa22.07■■□□□ 1.12
UPF3AP3-201ENST00000420996 TRAF5O00463 557 aa22.07■■□□□ 1.12
UPF3AP3-201ENST00000420996 KIAA2012Q0VF49 1180 aa22.07■■□□□ 1.12
UPF3AP3-201ENST00000420996 DDX46Q7L014 1031 aaKnown RBP22.07■■□□□ 1.12
UPF3AP3-201ENST00000420996 CAPNS2Q96L46 248 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 233 ms