RNA–Protein interactions for RNA: ENST00000420296.1

NDUFA3-207, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-207ENST00000420296 KLRG1Q96E93 195 aa11.95□□□□□ -0.5
NDUFA3-207ENST00000420296 TRIM35Q9UPQ4 493 aa11.95□□□□□ -0.5
NDUFA3-207ENST00000420296 TCERG1O14776 1098 aaKnown RBP11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 RGL2O15211 777 aa11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
NDUFA3-207ENST00000420296 IBTKQ9P2D0 1353 aaPredicted RBP11.93□□□□□ -0.5
NDUFA3-207ENST00000420296 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
NDUFA3-207ENST00000420296 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
NDUFA3-207ENST00000420296 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
NDUFA3-207ENST00000420296 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
NDUFA3-207ENST00000420296 CCDC184Q52MB2 194 aa11.92□□□□□ -0.5
NDUFA3-207ENST00000420296 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
NDUFA3-207ENST00000420296 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
NDUFA3-207ENST00000420296 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
NDUFA3-207ENST00000420296 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
NDUFA3-207ENST00000420296 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
NDUFA3-207ENST00000420296 LRRC37AA6NMS7 1700 aa11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 SPEF2Q9C093 1822 aa11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 WDR43Q15061 677 aaKnown RBP eCLIP11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 RPGRQ92834 1020 aaKnown RBP11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
NDUFA3-207ENST00000420296 RNF123Q5XPI4 1314 aa11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 CHL1O00533 1208 aa11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 ALDH1B1P30837 517 aa11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 LMOD3Q0VAK6 560 aa11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 DUOX1Q9NRD9 1551 aa11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
NDUFA3-207ENST00000420296 ABCC4O15439 1325 aa11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 PPEF1O14829 653 aaPredicted RBP11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 RTKN2Q8IZC4 609 aa11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
NDUFA3-207ENST00000420296 FZD9O00144 591 aa11.88□□□□□ -0.51
NDUFA3-207ENST00000420296 NLRP10Q86W26 655 aa11.88□□□□□ -0.51
NDUFA3-207ENST00000420296 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
NDUFA3-207ENST00000420296 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
NDUFA3-207ENST00000420296 COL13A1Q5TAT6 717 aaPredicted RBP11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 CRAMP1Q96RY5 1269 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 PSMD1Q99460 953 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
NDUFA3-207ENST00000420296 MYH3P11055 1940 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 APAF1O14727 1248 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 EPHX2P34913 555 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 AOC3Q16853 763 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 PARP10Q53GL7 1025 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
NDUFA3-207ENST00000420296 POLR2AP24928 1970 aaKnown RBP11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 IQCA1LA6NCM1 817 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 SLC10A5Q5PT55 438 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 LDHDQ86WU2 507 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 NLRP3Q96P20 1036 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 TRMT112Q9UI30 125 aaKnown RBP11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
NDUFA3-207ENST00000420296 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 PPIP5K2O43314 1243 aa11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 HSPA1AP0DMV8 641 aaKnown RBP11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 HSPA1BP0DMV9 641 aaKnown RBP11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 EPS15P42566 896 aa11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 SCNN1DP51172 638 aa11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 ATP6V0A2Q9Y487 856 aa11.84□□□□□ -0.51
NDUFA3-207ENST00000420296 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 GPC2Q8N158 579 aa11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
NDUFA3-207ENST00000420296 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
NDUFA3-207ENST00000420296 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms