RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 COL11A2P13942 1736 aaPredicted RBP26.33■■□□□ 1.81
HMGXB4-203ENST00000420166 RNF123Q5XPI4 1314 aa26.33■■□□□ 1.81
HMGXB4-203ENST00000420166 RIC1Q4ADV7 1423 aa26.32■■□□□ 1.8
HMGXB4-203ENST00000420166 RARSP54136 660 aaKnown RBP26.32■■□□□ 1.8
HMGXB4-203ENST00000420166 ERFEQ4G0M1 354 aa26.32■■□□□ 1.8
HMGXB4-203ENST00000420166 DNAAF4Q8WXU2 420 aa26.32■■□□□ 1.8
HMGXB4-203ENST00000420166 TNRC6CQ9HCJ0 1690 aaKnown RBP26.31■■□□□ 1.8
HMGXB4-203ENST00000420166 CHRNA5P30532 468 aa26.31■■□□□ 1.8
HMGXB4-203ENST00000420166 PDE6BP35913 854 aa26.31■■□□□ 1.8
HMGXB4-203ENST00000420166 NEXNQ0ZGT2 675 aa26.31■■□□□ 1.8
HMGXB4-203ENST00000420166 KCNA3P22001 575 aa26.3■■□□□ 1.8
HMGXB4-203ENST00000420166 TRMT112Q9UI30 125 aaKnown RBP26.3■■□□□ 1.8
HMGXB4-203ENST00000420166 F6X3S4 739 aa26.29■■□□□ 1.8
HMGXB4-203ENST00000420166 IGKV5-2P06315 115 aa26.29■■□□□ 1.8
HMGXB4-203ENST00000420166 C2CD5Q86YS7 1000 aa26.29■■□□□ 1.8
HMGXB4-203ENST00000420166 CCDC191Q8NCU4 936 aa26.29■■□□□ 1.8
HMGXB4-203ENST00000420166 PDZRN3Q9UPQ7 1066 aa26.29■■□□□ 1.8
HMGXB4-203ENST00000420166 PTPRCP08575 1304 aa26.29■■□□□ 1.8
HMGXB4-203ENST00000420166 BRPF1P55201 1214 aaPredicted RBP26.28■■□□□ 1.8
HMGXB4-203ENST00000420166 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
HMGXB4-203ENST00000420166 CWC25Q9NXE8 425 aaPredicted RBP26.28■■□□□ 1.8
HMGXB4-203ENST00000420166 SH3TC1Q8TE82 1336 aa26.28■■□□□ 1.8
HMGXB4-203ENST00000420166 H0YIN7 160 aa26.27■■□□□ 1.8
HMGXB4-203ENST00000420166 LAMB2P55268 1798 aa26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 DDX60Q8IY21 1712 aaKnown RBP26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 KLRG2A4D1S0 409 aaPredicted RBP26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 NEURL1BA8MQ27 555 aa26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 CWF19L2Q2TBE0 894 aaKnown RBP26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 SYNE4Q8N205 404 aa26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 LINS1Q8NG48 757 aa26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 WWC3Q9ULE0 1092 aa26.26■■□□□ 1.79
HMGXB4-203ENST00000420166 SLC10A5Q5PT55 438 aa26.25■■□□□ 1.79
HMGXB4-203ENST00000420166 PELP1Q8IZL8 1130 aaKnown RBP26.25■■□□□ 1.79
HMGXB4-203ENST00000420166 PIM2Q9P1W9 311 aa26.25■■□□□ 1.79
HMGXB4-203ENST00000420166 SRGNP10124 158 aa26.24■■□□□ 1.79
HMGXB4-203ENST00000420166 ZBTB38Q8NAP3 1195 aaPredicted RBP26.24■■□□□ 1.79
HMGXB4-203ENST00000420166 FAM89AQ96GI7 184 aa26.24■■□□□ 1.79
HMGXB4-203ENST00000420166 ARFGEF1Q9Y6D6 1849 aa26.23■■□□□ 1.79
HMGXB4-203ENST00000420166 KIF16BQ96L93 1317 aa26.23■■□□□ 1.79
HMGXB4-203ENST00000420166 DCAF8L1A6NGE4 600 aa26.23■■□□□ 1.79
HMGXB4-203ENST00000420166 PCCAP05165 728 aaPredicted RBP26.23■■□□□ 1.79
HMGXB4-203ENST00000420166 GPR162Q16538 588 aa26.23■■□□□ 1.79
HMGXB4-203ENST00000420166 BEND3Q5T5X7 828 aa26.23■■□□□ 1.79
HMGXB4-203ENST00000420166 CACNA1SQ13698 1873 aa26.22■■□□□ 1.79
HMGXB4-203ENST00000420166 HCLS1P14317 486 aaPredicted RBP26.22■■□□□ 1.79
HMGXB4-203ENST00000420166 YBX3P16989 372 aaKnown RBP eCLIP26.22■■□□□ 1.79
HMGXB4-203ENST00000420166 CRY2Q49AN0 593 aa26.22■■□□□ 1.79
HMGXB4-203ENST00000420166 NOB1Q9ULX3 412 aaKnown RBP26.22■■□□□ 1.79
HMGXB4-203ENST00000420166 RTL5Q5HYW3 569 aaPredicted RBP26.21■■□□□ 1.79
HMGXB4-203ENST00000420166 STYK1Q6J9G0 422 aa26.21■■□□□ 1.79
HMGXB4-203ENST00000420166 SLC4A10Q6U841 1118 aa26.21■■□□□ 1.79
HMGXB4-203ENST00000420166 ZNF622Q969S3 477 aaKnown RBP eCLIP26.21■■□□□ 1.797e-7■□□□□ 9.9
HMGXB4-203ENST00000420166 MASTLQ96GX5 879 aa26.21■■□□□ 1.79
HMGXB4-203ENST00000420166 BCAR3O75815 825 aa26.2■■□□□ 1.78
HMGXB4-203ENST00000420166 NPR1P16066 1061 aa26.2■■□□□ 1.78
HMGXB4-203ENST00000420166 GCKRQ14397 625 aa26.2■■□□□ 1.78
HMGXB4-203ENST00000420166 C3orf67Q6ZVT6 689 aa26.2■■□□□ 1.78
HMGXB4-203ENST00000420166 NLRP3Q96P20 1036 aa26.2■■□□□ 1.78
HMGXB4-203ENST00000420166 BCS1LQ9Y276 419 aa26.2■■□□□ 1.78
HMGXB4-203ENST00000420166 DALRD3Q5D0E6 543 aaKnown RBP26.19■■□□□ 1.78
HMGXB4-203ENST00000420166 TTLL6Q8N841 843 aa26.19■■□□□ 1.78
HMGXB4-203ENST00000420166 IRS4O14654 1257 aaPredicted RBP26.18■■□□□ 1.78
HMGXB4-203ENST00000420166 ALDH1L1O75891 902 aa26.18■■□□□ 1.78
HMGXB4-203ENST00000420166 JARID2Q92833 1246 aaPredicted RBP26.18■■□□□ 1.78
HMGXB4-203ENST00000420166 API5Q9BZZ5 524 aaKnown RBP26.18■■□□□ 1.78
HMGXB4-203ENST00000420166 SRCIN1Q9C0H9 1055 aa26.18■■□□□ 1.78
HMGXB4-203ENST00000420166 SLX4Q8IY92 1834 aa26.18■■□□□ 1.78
HMGXB4-203ENST00000420166 CDHR2Q9BYE9 1310 aa26.17■■□□□ 1.78
HMGXB4-203ENST00000420166 ARHGAP45Q92619 1136 aa26.17■■□□□ 1.78
HMGXB4-203ENST00000420166 RPGRQ92834 1020 aaKnown RBP26.17■■□□□ 1.78
HMGXB4-203ENST00000420166 CNKSR1Q969H4 720 aa26.17■■□□□ 1.78
HMGXB4-203ENST00000420166 MYH3P11055 1940 aa26.17■■□□□ 1.78
HMGXB4-203ENST00000420166 H7C1W4 665 aa26.16■■□□□ 1.78
HMGXB4-203ENST00000420166 HSP90B1P14625 803 aaKnown RBP26.16■■□□□ 1.78
HMGXB4-203ENST00000420166 UBE3BQ7Z3V4 1068 aa26.16■■□□□ 1.78
HMGXB4-203ENST00000420166 HOXA10P31260 410 aaPredicted RBP26.15■■□□□ 1.78
HMGXB4-203ENST00000420166 IPO8O15397 1037 aaKnown RBP26.14■■□□□ 1.78
HMGXB4-203ENST00000420166 GRIN3BO60391 1043 aa26.14■■□□□ 1.78
HMGXB4-203ENST00000420166 CASP7P55210 303 aa26.13■■□□□ 1.77
HMGXB4-203ENST00000420166 PRPF40BQ6NWY9 871 aaKnown RBP26.13■■□□□ 1.77
HMGXB4-203ENST00000420166 FRAT1Q92837 279 aaPredicted RBP26.13■■□□□ 1.77
HMGXB4-203ENST00000420166 GOLGB1Q14789 3259 aaKnown RBP26.12■■□□□ 1.77
HMGXB4-203ENST00000420166 PDE8AO60658 829 aa26.12■■□□□ 1.77
HMGXB4-203ENST00000420166 SF3B3Q15393 1217 aaKnown RBP26.12■■□□□ 1.77
HMGXB4-203ENST00000420166 RBM17Q96I25 401 aaKnown RBP26.12■■□□□ 1.77
HMGXB4-203ENST00000420166 TAF1P21675 1872 aa26.11■■□□□ 1.77
HMGXB4-203ENST00000420166 GRM8O00222 908 aa26.11■■□□□ 1.77
HMGXB4-203ENST00000420166 ALDH1B1P30837 517 aa26.11■■□□□ 1.77
HMGXB4-203ENST00000420166 ATF7IPQ6VMQ6 1270 aa26.11■■□□□ 1.77
HMGXB4-203ENST00000420166 CRAMP1Q96RY5 1269 aa26.11■■□□□ 1.77
HMGXB4-203ENST00000420166 ABCC4O15439 1325 aa26.11■■□□□ 1.77
HMGXB4-203ENST00000420166 TRIM27P14373 513 aa26.1■■□□□ 1.77
HMGXB4-203ENST00000420166 RCAN3Q9UKA8 241 aa26.1■■□□□ 1.77
HMGXB4-203ENST00000420166 CHD4Q14839 1912 aa26.1■■□□□ 1.77
HMGXB4-203ENST00000420166 CCT4P50991 539 aaKnown RBP26.09■■□□□ 1.77
HMGXB4-203ENST00000420166 ZKSCAN2Q63HK3 967 aa26.09■■□□□ 1.77
HMGXB4-203ENST00000420166 C9orf78Q9NZ63 289 aaPredicted RBP26.09■■□□□ 1.77
HMGXB4-203ENST00000420166 CTSWP56202 376 aa26.08■■□□□ 1.77
HMGXB4-203ENST00000420166 PLA2G12BQ9BX93 195 aa26.08■■□□□ 1.77
HMGXB4-203ENST00000420166 DDX46Q7L014 1031 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms