RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 PSMD1Q99460 953 aa26.62■■□□□ 1.85
MCF2L-212ENST00000420013 TRIM35Q9UPQ4 493 aa26.62■■□□□ 1.85
MCF2L-212ENST00000420013 IQCA1LA6NCM1 817 aa26.61■■□□□ 1.85
MCF2L-212ENST00000420013 NEUROD2Q15784 382 aa26.61■■□□□ 1.85
MCF2L-212ENST00000420013 KLRG1Q96E93 195 aa26.61■■□□□ 1.85
MCF2L-212ENST00000420013 DDX21Q9NR30 783 aaKnown RBP eCLIP26.61■■□□□ 1.85
MCF2L-212ENST00000420013 PROSER3Q2NL68 480 aa26.6■■□□□ 1.85
MCF2L-212ENST00000420013 ADAMTS8Q9UP79 889 aa26.6■■□□□ 1.85
MCF2L-212ENST00000420013 DDNO94850 711 aaPredicted RBP26.59■■□□□ 1.85
MCF2L-212ENST00000420013 IARSP41252 1262 aaKnown RBP26.59■■□□□ 1.85
MCF2L-212ENST00000420013 RBM17Q96I25 401 aaKnown RBP26.59■■□□□ 1.85
MCF2L-212ENST00000420013 CRAMP1Q96RY5 1269 aa26.59■■□□□ 1.85
MCF2L-212ENST00000420013 ZNF277Q9NRM2 450 aaPredicted RBP26.59■■□□□ 1.85
MCF2L-212ENST00000420013 ANXA1P04083 346 aa26.57■■□□□ 1.84
MCF2L-212ENST00000420013 OLFM4Q6UX06 510 aa26.57■■□□□ 1.84
MCF2L-212ENST00000420013 UTP14AQ9BVJ6 771 aaKnown RBP26.57■■□□□ 1.84
MCF2L-212ENST00000420013 ADAMTSL1Q8N6G6 1762 aa26.56■■□□□ 1.84
MCF2L-212ENST00000420013 JMYQ8N9B5 988 aa26.56■■□□□ 1.84
MCF2L-212ENST00000420013 XAGE3Q8WTP9 111 aa26.56■■□□□ 1.84
MCF2L-212ENST00000420013 CFAP44Q96MT7 982 aa26.56■■□□□ 1.84
MCF2L-212ENST00000420013 NLRP3Q96P20 1036 aa26.56■■□□□ 1.84
MCF2L-212ENST00000420013 HDGFL1Q5TGJ6 251 aa26.55■■□□□ 1.84
MCF2L-212ENST00000420013 COPS6Q7L5N1 327 aa26.55■■□□□ 1.84
MCF2L-212ENST00000420013 SYNE4Q8N205 404 aa26.55■■□□□ 1.84
MCF2L-212ENST00000420013 LAS1LQ9Y4W2 734 aaKnown RBP26.55■■□□□ 1.84
MCF2L-212ENST00000420013 DDX60Q8IY21 1712 aaKnown RBP26.55■■□□□ 1.84
MCF2L-212ENST00000420013 ZNF541Q9H0D2 1346 aa26.55■■□□□ 1.84
MCF2L-212ENST00000420013 PPEF1O14829 653 aaPredicted RBP26.54■■□□□ 1.84
MCF2L-212ENST00000420013 HTRA3P83110 453 aa26.54■■□□□ 1.84
MCF2L-212ENST00000420013 SLC10A5Q5PT55 438 aa26.54■■□□□ 1.84
MCF2L-212ENST00000420013 CHADLQ6NUI6 762 aa26.54■■□□□ 1.84
MCF2L-212ENST00000420013 FZD9O00144 591 aa26.53■■□□□ 1.84
MCF2L-212ENST00000420013 CALD1Q05682 793 aaKnown RBP26.53■■□□□ 1.84
MCF2L-212ENST00000420013 KRT24Q2M2I5 525 aa26.53■■□□□ 1.84
MCF2L-212ENST00000420013 NECTIN2Q92692 538 aa26.53■■□□□ 1.84
MCF2L-212ENST00000420013 CHPF2Q9P2E5 772 aa26.53■■□□□ 1.84
MCF2L-212ENST00000420013 LRRC37AA6NMS7 1700 aa26.53■■□□□ 1.84
MCF2L-212ENST00000420013 AIMP1Q12904 312 aaKnown RBP26.52■■□□□ 1.84
MCF2L-212ENST00000420013 NLRP10Q86W26 655 aa26.52■■□□□ 1.84
MCF2L-212ENST00000420013 LDHDQ86WU2 507 aa26.52■■□□□ 1.84
MCF2L-212ENST00000420013 JDP2Q8WYK2 163 aa26.52■■□□□ 1.84
MCF2L-212ENST00000420013 COL4A5P29400 1685 aa26.51■■□□□ 1.83
MCF2L-212ENST00000420013 TCIRG1Q13488 830 aa26.51■■□□□ 1.83
MCF2L-212ENST00000420013 TAF1DQ9H5J8 278 aaPredicted RBP26.51■■□□□ 1.83
MCF2L-212ENST00000420013 DBF4Q9UBU7 674 aaPredicted RBP26.51■■□□□ 1.83
MCF2L-212ENST00000420013 SH3TC1Q8TE82 1336 aa26.5■■□□□ 1.83
MCF2L-212ENST00000420013 C3orf67Q6ZVT6 689 aa26.5■■□□□ 1.83
MCF2L-212ENST00000420013 GPC2Q8N158 579 aa26.5■■□□□ 1.83
MCF2L-212ENST00000420013 TMX4Q9H1E5 349 aaPredicted RBP26.5■■□□□ 1.83
MCF2L-212ENST00000420013 ABCC4O15439 1325 aa26.49■■□□□ 1.83
MCF2L-212ENST00000420013 PLBD2Q8NHP8 589 aa26.49■■□□□ 1.83
MCF2L-212ENST00000420013 IFT57Q9NWB7 429 aa26.49■■□□□ 1.83
MCF2L-212ENST00000420013 HACL1Q9UJ83 578 aa26.49■■□□□ 1.83
MCF2L-212ENST00000420013 IFFO2Q5TF58 517 aa26.48■■□□□ 1.83
MCF2L-212ENST00000420013 MBIPQ9NS73 344 aa26.48■■□□□ 1.83
MCF2L-212ENST00000420013 HYPKQ9NX55 129 aa26.48■■□□□ 1.83
MCF2L-212ENST00000420013 ZNF853P0CG23 659 aa26.47■■□□□ 1.83
MCF2L-212ENST00000420013 VPS33BQ9H267 617 aa26.47■■□□□ 1.83
MCF2L-212ENST00000420013 TRMT112Q9UI30 125 aaKnown RBP26.47■■□□□ 1.83
MCF2L-212ENST00000420013 ATP6V0A2Q9Y487 856 aa26.47■■□□□ 1.83
MCF2L-212ENST00000420013 POTEIP0CG38 1075 aa26.46■■□□□ 1.83
MCF2L-212ENST00000420013 POTEJP0CG39 1038 aa26.46■■□□□ 1.83
MCF2L-212ENST00000420013 EIF6P56537 245 aaKnown RBP26.46■■□□□ 1.83
MCF2L-212ENST00000420013 GNAI1P63096 354 aa26.46■■□□□ 1.83
MCF2L-212ENST00000420013 DUSP27Q5VZP5 1158 aa26.46■■□□□ 1.83
MCF2L-212ENST00000420013 APAF1O14727 1248 aa26.45■■□□□ 1.82
MCF2L-212ENST00000420013 PNMA8AQ86V59 439 aaPredicted RBP26.45■■□□□ 1.82
MCF2L-212ENST00000420013 LARGE2Q8N3Y3 721 aa26.45■■□□□ 1.82
MCF2L-212ENST00000420013 CREBZFQ9NS37 354 aa26.45■■□□□ 1.82
MCF2L-212ENST00000420013 EPHX2P34913 555 aa26.44■■□□□ 1.82
MCF2L-212ENST00000420013 ANKRD13DQ6ZTN6 518 aa26.44■■□□□ 1.82
MCF2L-212ENST00000420013 SUPT20HQ8NEM7 779 aa26.44■■□□□ 1.82
MCF2L-212ENST00000420013 LTBP1Q14766 1721 aa26.44■■□□□ 1.82
MCF2L-212ENST00000420013 BBOX1O75936 387 aa26.43■■□□□ 1.82
MCF2L-212ENST00000420013 DDX46Q7L014 1031 aaKnown RBP26.43■■□□□ 1.82
MCF2L-212ENST00000420013 TMC4Q7Z404 712 aa26.43■■□□□ 1.82
MCF2L-212ENST00000420013 ISCA1Q9BUE6 129 aa26.43■■□□□ 1.82
MCF2L-212ENST00000420013 CHMP4AQ9BY43 222 aa26.43■■□□□ 1.82
MCF2L-212ENST00000420013 PASKQ96RG2 1323 aa26.42■■□□□ 1.82
MCF2L-212ENST00000420013 PCNTO95613 3336 aa26.42■■□□□ 1.82
MCF2L-212ENST00000420013 HCLS1P14317 486 aaPredicted RBP26.42■■□□□ 1.82
MCF2L-212ENST00000420013 GRAPQ13588 217 aa26.42■■□□□ 1.82
MCF2L-212ENST00000420013 NIM1KQ8IY84 436 aa26.42■■□□□ 1.82
MCF2L-212ENST00000420013 GRAPLQ8TC17 118 aaPredicted RBP26.42■■□□□ 1.82
MCF2L-212ENST00000420013 RTFDC1Q9BY42 306 aaPredicted RBP26.42■■□□□ 1.82
MCF2L-212ENST00000420013 TAF1P21675 1872 aa26.42■■□□□ 1.82
MCF2L-212ENST00000420013 PPIP5K2O43314 1243 aa26.41■■□□□ 1.82
MCF2L-212ENST00000420013 ZEB1P37275 1124 aaPredicted RBP26.41■■□□□ 1.82
MCF2L-212ENST00000420013 DUOX1Q9NRD9 1551 aa26.41■■□□□ 1.82
MCF2L-212ENST00000420013 LMOD1P29536 600 aaPredicted RBP26.4■■□□□ 1.82
MCF2L-212ENST00000420013 EAPPQ56P03 285 aaPredicted RBP26.4■■□□□ 1.82
MCF2L-212ENST00000420013 SP8Q8IXZ3 490 aa26.4■■□□□ 1.82
MCF2L-212ENST00000420013 TCERG1O14776 1098 aaKnown RBP26.39■■□□□ 1.82
MCF2L-212ENST00000420013 GOLGA2Q08379 1002 aa26.39■■□□□ 1.82
MCF2L-212ENST00000420013 TRIM28Q13263 835 aaKnown RBP26.39■■□□□ 1.82
MCF2L-212ENST00000420013 DPP8Q6V1X1 898 aaPredicted RBP26.38■■□□□ 1.81
MCF2L-212ENST00000420013 AOC3Q16853 763 aa26.37■■□□□ 1.81
MCF2L-212ENST00000420013 SLC51AQ86UW1 340 aa26.37■■□□□ 1.81
MCF2L-212ENST00000420013 GJA3Q9Y6H8 435 aa26.37■■□□□ 1.81
MCF2L-212ENST00000420013 MPNDQ8N594 471 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms