RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 RNF8O76064 485 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 MX1P20591 662 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 RASIP1Q5U651 963 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 DDX12PQ92771 950 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 N4BP2L2Q92802 583 aaPredicted RBP11.8□□□□□ -0.52
SATB1-204ENST00000417717 TPX2Q9ULW0 747 aaKnown RBP11.8□□□□□ -0.52
SATB1-204ENST00000417717 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.8□□□□□ -0.52
SATB1-204ENST00000417717 ZNF644Q9H582 1327 aaPredicted RBP11.8□□□□□ -0.52
SATB1-204ENST00000417717 ARHGAP5Q13017 1502 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 CTAGE9A4FU28 777 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 GOLGA6DP0CG33 693 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 NLRP5P59047 1200 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 ELF2Q15723 593 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
SATB1-204ENST00000417717 GOLGA6AQ9NYA3 693 aa11.8□□□□□ -0.52
SATB1-204ENST00000417717 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
SATB1-204ENST00000417717 VAV2P52735 878 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 RAD50Q92878 1312 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 CETN2P41208 172 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 MAGEA9P43362 315 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 SNCBQ16143 134 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 PDCD2Q16342 344 aaPredicted RBP11.79□□□□□ -0.52
SATB1-204ENST00000417717 RNF10Q8N5U6 811 aaKnown RBP11.79□□□□□ -0.52
SATB1-204ENST00000417717 USP6NLQ92738 828 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 DISP1Q96F81 1524 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 LIG3P49916 1009 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 SLMAPQ14BN4 828 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 USP47Q96K76 1375 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 HIP1RO75146 1068 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 UIMC1Q96RL1 719 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
SATB1-204ENST00000417717 CCDC144AA2RUR9 1427 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 KDM4AO75164 1064 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 ALDH3A1P30838 453 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 CFAP58Q5T655 872 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 SYT10Q6XYQ8 523 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 ZC4H2Q9NQZ6 224 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 FAF1Q9UNN5 650 aaPredicted RBP11.78□□□□□ -0.52
SATB1-204ENST00000417717 ATP8B1O43520 1251 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 NUCB1Q02818 461 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 PPFIA1Q13136 1202 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 CCDC178Q5BJE1 867 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 MYO1CO00159 1063 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
SATB1-204ENST00000417717 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 ABCC5O15440 1437 aa11.78□□□□□ -0.52
SATB1-204ENST00000417717 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.52
SATB1-204ENST00000417717 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.52
SATB1-204ENST00000417717 ITSN2Q9NZM3 1697 aa11.77□□□□□ -0.52
SATB1-204ENST00000417717 PTGS1P23219 599 aa11.77□□□□□ -0.52
SATB1-204ENST00000417717 ACTN2P35609 894 aa11.77□□□□□ -0.52
SATB1-204ENST00000417717 PSMC4P43686 418 aa11.77□□□□□ -0.52
SATB1-204ENST00000417717 MVPQ14764 893 aaKnown RBP11.77□□□□□ -0.52
SATB1-204ENST00000417717 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.52
SATB1-204ENST00000417717 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.53
SATB1-204ENST00000417717 GMNNO75496 209 aa11.77□□□□□ -0.53
SATB1-204ENST00000417717 STMN1P16949 149 aa11.77□□□□□ -0.53
SATB1-204ENST00000417717 ZBTB16Q05516 673 aa11.77□□□□□ -0.53
SATB1-204ENST00000417717 INTS8Q75QN2 995 aaKnown RBP11.77□□□□□ -0.53
SATB1-204ENST00000417717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.77□□□□□ -0.53
SATB1-204ENST00000417717 CCDC141Q6ZP82 1450 aa11.77□□□□□ -0.53
SATB1-204ENST00000417717 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
SATB1-204ENST00000417717 SEC62Q99442 399 aaKnown RBP11.77□□□□□ -0.53
SATB1-204ENST00000417717 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 ZNF445P59923 1031 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 SNX21Q969T3 373 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 SUFUQ9UMX1 484 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 KIAA1107Q9UPP5 1409 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
SATB1-204ENST00000417717 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 BLOC1S2Q6QNY1 142 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 MORC4Q8TE76 937 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 CDK5RAP3Q96JB5 506 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 CXorf56Q9H5V9 222 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 PDRG1Q9NUG6 133 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 DYNC1I2Q13409 638 aaKnown RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 TANGO6Q9C0B7 1094 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 SLC24A3Q9HC58 644 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 RNF216Q9NWF9 866 aaPredicted RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 PPFIA4O75335 1185 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 PSMD7P51665 324 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 ZC3H6P61129 1189 aaKnown RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 TSC22D3Q99576 134 aa11.76□□□□□ -0.53
SATB1-204ENST00000417717 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
SATB1-204ENST00000417717 ELP1O95163 1332 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 PNISRQ8TF01 805 aaKnown RBP11.75□□□□□ -0.53
SATB1-204ENST00000417717 LRRC45Q96CN5 670 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
SATB1-204ENST00000417717 COG7P83436 770 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 RMDN2Q96LZ7 410 aa11.75□□□□□ -0.53
SATB1-204ENST00000417717 SRCIN1Q9C0H9 1055 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms