RNA–Protein interactions for RNA: ENST00000417231.5

UBE2F-207, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 984 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-207ENST00000417231 SYNE4Q8N205 404 aa25.77■■□□□ 1.72
UBE2F-207ENST00000417231 NUP98P52948 1817 aa25.77■■□□□ 1.72
UBE2F-207ENST00000417231 POTECB2RU33 542 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 HOXB7P09629 217 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 GNAI1P63096 354 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 FKBP4Q02790 459 aaKnown RBP eCLIP25.76■■□□□ 1.71
UBE2F-207ENST00000417231 TCIRG1Q13488 830 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 SLC51AQ86UW1 340 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 NLRP10Q86W26 655 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 IFT57Q9NWB7 429 aa25.76■■□□□ 1.71
UBE2F-207ENST00000417231 DBF4Q9UBU7 674 aaPredicted RBP25.76■■□□□ 1.71
UBE2F-207ENST00000417231 IBTKQ9P2D0 1353 aaPredicted RBP25.76■■□□□ 1.71
UBE2F-207ENST00000417231 TNRC6CQ9HCJ0 1690 aaKnown RBP25.75■■□□□ 1.71
UBE2F-207ENST00000417231 DDNO94850 711 aaPredicted RBP25.75■■□□□ 1.71
UBE2F-207ENST00000417231 HOXA10P31260 410 aaPredicted RBP25.75■■□□□ 1.71
UBE2F-207ENST00000417231 HSP90AB3PQ58FF7 597 aa25.75■■□□□ 1.71
UBE2F-207ENST00000417231 RTKN2Q8IZC4 609 aa25.75■■□□□ 1.71
UBE2F-207ENST00000417231 RBM17Q96I25 401 aaKnown RBP25.75■■□□□ 1.71
UBE2F-207ENST00000417231 NLRP3Q96P20 1036 aa25.75■■□□□ 1.71
UBE2F-207ENST00000417231 HCLS1P14317 486 aaPredicted RBP25.74■■□□□ 1.71
UBE2F-207ENST00000417231 CALD1Q05682 793 aaKnown RBP25.74■■□□□ 1.71
UBE2F-207ENST00000417231 SLC10A5Q5PT55 438 aa25.74■■□□□ 1.71
UBE2F-207ENST00000417231 ANKRD13DQ6ZTN6 518 aa25.73■■□□□ 1.71
UBE2F-207ENST00000417231 C8orf58Q8NAV2 365 aa25.73■■□□□ 1.71
UBE2F-207ENST00000417231 TRMT112Q9UI30 125 aaKnown RBP25.73■■□□□ 1.71
UBE2F-207ENST00000417231 FER1L6Q2WGJ9 1857 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 ANP32CO43423 234 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 APLP1P51693 650 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 FSTL1Q12841 308 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 PLBD2Q8NHP8 589 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 CRAMP1Q96RY5 1269 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 MRS2Q9HD23 443 aa25.72■■□□□ 1.71
UBE2F-207ENST00000417231 CACNA1SQ13698 1873 aa25.71■■□□□ 1.71
UBE2F-207ENST00000417231 ATP5J2-PTCD1G3V325 749 aa25.71■■□□□ 1.71
UBE2F-207ENST00000417231 HTRA3P83110 453 aa25.71■■□□□ 1.71
UBE2F-207ENST00000417231 HYPKQ9NX55 129 aa25.71■■□□□ 1.71
UBE2F-207ENST00000417231 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
UBE2F-207ENST00000417231 RIC1Q4ADV7 1423 aa25.7■■□□□ 1.7
UBE2F-207ENST00000417231 CCDC88AQ3V6T2 1871 aa25.69■■□□□ 1.7
UBE2F-207ENST00000417231 PPEF1O14829 653 aaPredicted RBP25.69■■□□□ 1.7
UBE2F-207ENST00000417231 SMC1BQ8NDV3 1235 aa25.69■■□□□ 1.7
UBE2F-207ENST00000417231 IARSP41252 1262 aaKnown RBP25.68■■□□□ 1.7
UBE2F-207ENST00000417231 TSR2Q969E8 191 aaKnown RBP25.68■■□□□ 1.7
UBE2F-207ENST00000417231 TIAM2Q8IVF5 1701 aa25.68■■□□□ 1.7
UBE2F-207ENST00000417231 TSPYL6Q8N831 410 aa25.67■■□□□ 1.7
UBE2F-207ENST00000417231 ARFGEF2Q9Y6D5 1785 aa25.67■■□□□ 1.7
UBE2F-207ENST00000417231 SH3TC1Q8TE82 1336 aa25.66■■□□□ 1.7
UBE2F-207ENST00000417231 RTL5Q5HYW3 569 aaPredicted RBP25.66■■□□□ 1.7
UBE2F-207ENST00000417231 CC2D2BQ6DHV5 1058 aa25.66■■□□□ 1.7
UBE2F-207ENST00000417231 FAM89AQ96GI7 184 aa25.66■■□□□ 1.7
UBE2F-207ENST00000417231 PSMD1Q99460 953 aa25.66■■□□□ 1.7
UBE2F-207ENST00000417231 ISCA1Q9BUE6 129 aa25.66■■□□□ 1.7
UBE2F-207ENST00000417231 SALL2Q9Y467 1007 aaPredicted RBP25.66■■□□□ 1.7
UBE2F-207ENST00000417231 ZNF541Q9H0D2 1346 aa25.65■■□□□ 1.7
UBE2F-207ENST00000417231 RIC3Q7Z5B4 369 aa25.65■■□□□ 1.7
UBE2F-207ENST00000417231 WWC1Q8IX03 1113 aa25.65■■□□□ 1.7
UBE2F-207ENST00000417231 ABCC4O15439 1325 aa25.64■■□□□ 1.7
UBE2F-207ENST00000417231 RNF123Q5XPI4 1314 aa25.64■■□□□ 1.7
UBE2F-207ENST00000417231 DNAJC5GQ8N7S2 189 aa25.64■■□□□ 1.7
UBE2F-207ENST00000417231 SNED1Q8TER0 1413 aa25.63■■□□□ 1.69
UBE2F-207ENST00000417231 POTEIP0CG38 1075 aa25.63■■□□□ 1.69
UBE2F-207ENST00000417231 POTEJP0CG39 1038 aa25.63■■□□□ 1.69
UBE2F-207ENST00000417231 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
UBE2F-207ENST00000417231 JDP2Q8WYK2 163 aa25.62■■□□□ 1.69
UBE2F-207ENST00000417231 ATP6V0A2Q9Y487 856 aa25.62■■□□□ 1.69
UBE2F-207ENST00000417231 FZD9O00144 591 aa25.61■■□□□ 1.69
UBE2F-207ENST00000417231 GOLGA2Q08379 1002 aa25.61■■□□□ 1.69
UBE2F-207ENST00000417231 DDX46Q7L014 1031 aaKnown RBP25.61■■□□□ 1.69
UBE2F-207ENST00000417231 TMX4Q9H1E5 349 aaPredicted RBP25.61■■□□□ 1.69
UBE2F-207ENST00000417231 BBOX1O75936 387 aa25.6■■□□□ 1.69
UBE2F-207ENST00000417231 CCDC30Q5VVM6 783 aa25.6■■□□□ 1.69
UBE2F-207ENST00000417231 LARGE2Q8N3Y3 721 aa25.6■■□□□ 1.69
UBE2F-207ENST00000417231 GRIPAP1Q4V328 841 aa25.59■■□□□ 1.69
UBE2F-207ENST00000417231 MYD88Q99836 296 aa25.59■■□□□ 1.69
UBE2F-207ENST00000417231 WDR90Q96KV7 1748 aa25.59■■□□□ 1.69
UBE2F-207ENST00000417231 TRIM28Q13263 835 aaKnown RBP25.58■■□□□ 1.69
UBE2F-207ENST00000417231 L3MBTL3Q96JM7 780 aaPredicted RBP25.58■■□□□ 1.69
UBE2F-207ENST00000417231 DICER1Q9UPY3 1922 aaKnown RBP25.58■■□□□ 1.69
UBE2F-207ENST00000417231 GRAPQ13588 217 aa25.57■■□□□ 1.68
UBE2F-207ENST00000417231 SP8Q8IXZ3 490 aa25.57■■□□□ 1.68
UBE2F-207ENST00000417231 GRAPLQ8TC17 118 aaPredicted RBP25.57■■□□□ 1.68
UBE2F-207ENST00000417231 JARID2Q92833 1246 aaPredicted RBP25.57■■□□□ 1.68
UBE2F-207ENST00000417231 TAF1DQ9H5J8 278 aaPredicted RBP25.57■■□□□ 1.68
UBE2F-207ENST00000417231 GJA3Q9Y6H8 435 aa25.57■■□□□ 1.68
UBE2F-207ENST00000417231 IQCA1LA6NCM1 817 aa25.56■■□□□ 1.68
UBE2F-207ENST00000417231 AOC3Q16853 763 aa25.56■■□□□ 1.68
UBE2F-207ENST00000417231 CHADLQ6NUI6 762 aa25.56■■□□□ 1.68
UBE2F-207ENST00000417231 FAM9BQ8IZU0 186 aa25.56■■□□□ 1.68
UBE2F-207ENST00000417231 IRS4O14654 1257 aaPredicted RBP25.55■■□□□ 1.68
UBE2F-207ENST00000417231 PPIP5K2O43314 1243 aa25.55■■□□□ 1.68
UBE2F-207ENST00000417231 EIF6P56537 245 aaKnown RBP25.55■■□□□ 1.68
UBE2F-207ENST00000417231 EAPPQ56P03 285 aaPredicted RBP25.55■■□□□ 1.68
UBE2F-207ENST00000417231 DPP8Q6V1X1 898 aaPredicted RBP25.55■■□□□ 1.68
UBE2F-207ENST00000417231 HACL1Q9UJ83 578 aa25.55■■□□□ 1.68
UBE2F-207ENST00000417231 COL4A5P29400 1685 aa25.55■■□□□ 1.68
UBE2F-207ENST00000417231 SF3B3Q15393 1217 aaKnown RBP25.54■■□□□ 1.68
UBE2F-207ENST00000417231 TWISTNBQ3B726 338 aaPredicted RBP25.54■■□□□ 1.68
UBE2F-207ENST00000417231 GPC2Q8N158 579 aa25.54■■□□□ 1.68
UBE2F-207ENST00000417231 MPNDQ8N594 471 aa25.54■■□□□ 1.68
UBE2F-207ENST00000417231 CELF1Q92879 486 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms