RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
ITGA6-205ENST00000416789 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
ITGA6-205ENST00000416789 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
ITGA6-205ENST00000416789 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
ITGA6-205ENST00000416789 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
ITGA6-205ENST00000416789 PRAMEF22A3QJZ6 481 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 E9PSI1 815 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 TGFB2P61812 414 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 SYT17Q9BSW7 474 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 SCUBE2Q9NQ36 999 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 DLEC1Q9Y238 1755 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 MAP3K15Q6ZN16 1313 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
ITGA6-205ENST00000416789 CARMIL3Q8ND23 1372 aa11.02□□□□□ -0.65
ITGA6-205ENST00000416789 IBTKQ9P2D0 1353 aaPredicted RBP11.02□□□□□ -0.65
ITGA6-205ENST00000416789 CHD4Q14839 1912 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
ITGA6-205ENST00000416789 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
ITGA6-205ENST00000416789 MSL1Q68DK7 614 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 STK31Q9BXU1 1019 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 FHDC1Q9C0D6 1143 aaPredicted RBP11.01□□□□□ -0.65
ITGA6-205ENST00000416789 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
ITGA6-205ENST00000416789 RNF123Q5XPI4 1314 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
ITGA6-205ENST00000416789 ARFGEF1Q9Y6D6 1849 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 POLRMTO00411 1230 aaKnown RBP11□□□□□ -0.65
ITGA6-205ENST00000416789 DDX58O95786 925 aaKnown RBP11□□□□□ -0.65
ITGA6-205ENST00000416789 NFIXQ14938 502 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 PDIA6Q15084 440 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 TWISTNBQ3B726 338 aaPredicted RBP11□□□□□ -0.65
ITGA6-205ENST00000416789 PARP10Q53GL7 1025 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
ITGA6-205ENST00000416789 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 PDCD7Q8N8D1 485 aaKnown RBP11□□□□□ -0.65
ITGA6-205ENST00000416789 NYXQ9GZU5 481 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 SRP68Q9UHB9 627 aaKnown RBP11□□□□□ -0.65
ITGA6-205ENST00000416789 TBC1D2BQ9UPU7 963 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
ITGA6-205ENST00000416789 ARFGEF2Q9Y6D5 1785 aa10.99□□□□□ -0.65
ITGA6-205ENST00000416789 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
ITGA6-205ENST00000416789 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 SERPINB2P05120 415 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 MYL6BP14649 208 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 ST5P78524 1137 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 TPTE2Q6XPS3 522 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 PPP1R42Q7Z4L9 355 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 PLBD2Q8NHP8 589 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 RIC1Q4ADV7 1423 aa10.98□□□□□ -0.65
ITGA6-205ENST00000416789 HSP90B1P14625 803 aaKnown RBP10.97□□□□□ -0.65
ITGA6-205ENST00000416789 PDE6BP35913 854 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 DDR1Q08345 913 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 TBC1D9BQ66K14 1250 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 ANKRD13DQ6ZTN6 518 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 SMIM5Q71RC9 77 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 COPS6Q7L5N1 327 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 TSR2Q969E8 191 aaKnown RBP10.97□□□□□ -0.65
ITGA6-205ENST00000416789 BRIP1Q9BX63 1249 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 CHPF2Q9P2E5 772 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 NIP7Q9Y221 180 aaKnown RBP eCLIP10.97□□□□□ -0.65
ITGA6-205ENST00000416789 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-205ENST00000416789 N4BP2Q86UW6 1770 aaPredicted RBP10.97□□□□□ -0.65
ITGA6-205ENST00000416789 ANKRD31Q8N7Z5 1873 aa10.97□□□□□ -0.65
ITGA6-205ENST00000416789 GRIN3BO60391 1043 aa10.96□□□□□ -0.65
ITGA6-205ENST00000416789 VAMP4O75379 141 aa10.96□□□□□ -0.65
ITGA6-205ENST00000416789 SLFN5Q08AF3 891 aa10.96□□□□□ -0.65
ITGA6-205ENST00000416789 TRIM28Q13263 835 aaKnown RBP10.96□□□□□ -0.65
ITGA6-205ENST00000416789 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
ITGA6-205ENST00000416789 TRMT2AQ8IZ69 625 aaKnown RBP10.96□□□□□ -0.65
ITGA6-205ENST00000416789 CNBD1Q8NA66 436 aa10.96□□□□□ -0.65
ITGA6-205ENST00000416789 XAGE3Q8WTP9 111 aa10.96□□□□□ -0.65
ITGA6-205ENST00000416789 NPHP1O15259 732 aa10.95□□□□□ -0.66
ITGA6-205ENST00000416789 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
ITGA6-205ENST00000416789 TCIRG1Q13488 830 aa10.95□□□□□ -0.66
ITGA6-205ENST00000416789 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
ITGA6-205ENST00000416789 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
ITGA6-205ENST00000416789 ZNF34Q8IZ26 560 aa10.95□□□□□ -0.66
ITGA6-205ENST00000416789 LAMB2P55268 1798 aa10.95□□□□□ -0.66
ITGA6-205ENST00000416789 ELL2O00472 640 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-205ENST00000416789 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
ITGA6-205ENST00000416789 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
ITGA6-205ENST00000416789 ALDH1L2Q3SY69 923 aa10.94□□□□□ -0.66
ITGA6-205ENST00000416789 TSPYL6Q8N831 410 aa10.94□□□□□ -0.66
ITGA6-205ENST00000416789 MYH3P11055 1940 aa10.94□□□□□ -0.66
ITGA6-205ENST00000416789 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 ZBED9Q6R2W3 1325 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 H0YIN7 160 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 GTF2E1P29083 439 aaPredicted RBP10.93□□□□□ -0.66
ITGA6-205ENST00000416789 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 HLFQ16534 295 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 PRR5LQ6MZQ0 368 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 KSR2Q6VAB6 950 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 RIC3Q7Z5B4 369 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
ITGA6-205ENST00000416789 L3MBTL3Q96JM7 780 aaPredicted RBP10.93□□□□□ -0.66
ITGA6-205ENST00000416789 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms