RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
LINC01398-201ENST00000416581 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
LINC01398-201ENST00000416581 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
LINC01398-201ENST00000416581 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
LINC01398-201ENST00000416581 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
LINC01398-201ENST00000416581 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
LINC01398-201ENST00000416581 SNED1Q8TER0 1413 aa17.5■□□□□ 0.39
LINC01398-201ENST00000416581 TTLL7Q6ZT98 887 aa17.5■□□□□ 0.39
LINC01398-201ENST00000416581 NUTM1Q86Y26 1132 aa17.5■□□□□ 0.39
LINC01398-201ENST00000416581 SYNE4Q8N205 404 aa17.5■□□□□ 0.39
LINC01398-201ENST00000416581 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
LINC01398-201ENST00000416581 GPTP24298 496 aa17.49■□□□□ 0.39
LINC01398-201ENST00000416581 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
LINC01398-201ENST00000416581 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
LINC01398-201ENST00000416581 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
LINC01398-201ENST00000416581 NTSR2O95665 410 aa17.48■□□□□ 0.39
LINC01398-201ENST00000416581 HSPA1AP0DMV8 641 aaKnown RBP17.48■□□□□ 0.39
LINC01398-201ENST00000416581 HSPA1BP0DMV9 641 aaKnown RBP17.48■□□□□ 0.39
LINC01398-201ENST00000416581 LMOD1P29536 600 aaPredicted RBP17.48■□□□□ 0.39
LINC01398-201ENST00000416581 EPHX2P34913 555 aa17.48■□□□□ 0.39
LINC01398-201ENST00000416581 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
LINC01398-201ENST00000416581 SUSD4Q5VX71 490 aa17.48■□□□□ 0.39
LINC01398-201ENST00000416581 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
LINC01398-201ENST00000416581 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
LINC01398-201ENST00000416581 PASKQ96RG2 1323 aa17.47■□□□□ 0.39
LINC01398-201ENST00000416581 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
LINC01398-201ENST00000416581 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
LINC01398-201ENST00000416581 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
LINC01398-201ENST00000416581 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
LINC01398-201ENST00000416581 HOXB7P09629 217 aa17.46■□□□□ 0.39
LINC01398-201ENST00000416581 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC01398-201ENST00000416581 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
LINC01398-201ENST00000416581 SLC10A5Q5PT55 438 aa17.46■□□□□ 0.39
LINC01398-201ENST00000416581 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
LINC01398-201ENST00000416581 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
LINC01398-201ENST00000416581 NIM1KQ8IY84 436 aa17.45■□□□□ 0.38
LINC01398-201ENST00000416581 LARGE2Q8N3Y3 721 aa17.45■□□□□ 0.38
LINC01398-201ENST00000416581 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
LINC01398-201ENST00000416581 TMC4Q7Z404 712 aa17.44■□□□□ 0.38
LINC01398-201ENST00000416581 DDX21Q9NR30 783 aaKnown RBP eCLIP17.44■□□□□ 0.38
LINC01398-201ENST00000416581 BBOX1O75936 387 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 PDIA6Q15084 440 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 LRP10Q7Z4F1 713 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
LINC01398-201ENST00000416581 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
LINC01398-201ENST00000416581 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
LINC01398-201ENST00000416581 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
LINC01398-201ENST00000416581 CDHR2Q9BYE9 1310 aa17.42■□□□□ 0.38
LINC01398-201ENST00000416581 CHL1O00533 1208 aa17.41■□□□□ 0.38
LINC01398-201ENST00000416581 PPIP5K2O43314 1243 aa17.41■□□□□ 0.38
LINC01398-201ENST00000416581 SLC34A2O95436 690 aa17.41■□□□□ 0.38
LINC01398-201ENST00000416581 ITGBL1O95965 494 aaPredicted RBP17.41■□□□□ 0.38
LINC01398-201ENST00000416581 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
LINC01398-201ENST00000416581 CNTROBQ8N137 903 aa17.41■□□□□ 0.38
LINC01398-201ENST00000416581 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
LINC01398-201ENST00000416581 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
LINC01398-201ENST00000416581 CALD1Q05682 793 aaKnown RBP17.4■□□□□ 0.38
LINC01398-201ENST00000416581 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
LINC01398-201ENST00000416581 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
LINC01398-201ENST00000416581 COPS6Q7L5N1 327 aa17.4■□□□□ 0.38
LINC01398-201ENST00000416581 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
LINC01398-201ENST00000416581 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
LINC01398-201ENST00000416581 LAMB2P55268 1798 aa17.4■□□□□ 0.38
LINC01398-201ENST00000416581 HSP90B1P14625 803 aaKnown RBP17.39■□□□□ 0.37
LINC01398-201ENST00000416581 SP8Q8IXZ3 490 aa17.39■□□□□ 0.37
LINC01398-201ENST00000416581 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
LINC01398-201ENST00000416581 RTFDC1Q9BY42 306 aaPredicted RBP17.39■□□□□ 0.37
LINC01398-201ENST00000416581 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
LINC01398-201ENST00000416581 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
LINC01398-201ENST00000416581 ABCC4O15439 1325 aa17.39■□□□□ 0.37
LINC01398-201ENST00000416581 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
LINC01398-201ENST00000416581 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
LINC01398-201ENST00000416581 DPP8Q6V1X1 898 aaPredicted RBP17.38■□□□□ 0.37
LINC01398-201ENST00000416581 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
LINC01398-201ENST00000416581 ZNRF3Q9ULT6 936 aa17.38■□□□□ 0.37
LINC01398-201ENST00000416581 AIMP1Q12904 312 aaKnown RBP17.37■□□□□ 0.37
LINC01398-201ENST00000416581 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
LINC01398-201ENST00000416581 GRAPQ13588 217 aa17.37■□□□□ 0.37
LINC01398-201ENST00000416581 PROSER3Q2NL68 480 aa17.37■□□□□ 0.37
LINC01398-201ENST00000416581 MPNDQ8N594 471 aa17.37■□□□□ 0.37
LINC01398-201ENST00000416581 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
LINC01398-201ENST00000416581 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
LINC01398-201ENST00000416581 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
LINC01398-201ENST00000416581 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
LINC01398-201ENST00000416581 COL4A5P29400 1685 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 LRRC37AA6NMS7 1700 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 TRPM7Q96QT4 1865 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 ECE1P42892 770 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 CTCFP49711 727 aaPredicted RBP17.36■□□□□ 0.37
LINC01398-201ENST00000416581 SCNN1DP51172 638 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 TNIP1Q15025 636 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 NEUROD2Q15784 382 aa17.36■□□□□ 0.37
LINC01398-201ENST00000416581 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
LINC01398-201ENST00000416581 ADARB2Q9NS39 739 aaKnown RBP17.36■□□□□ 0.37
LINC01398-201ENST00000416581 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
LINC01398-201ENST00000416581 ANXA1P04083 346 aa17.35■□□□□ 0.37
LINC01398-201ENST00000416581 MAP2K1Q02750 393 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms