RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.61□□□□□ -0.39
LINC01090-201ENST00000415357 TSPYL4Q9UJ04 414 aa12.61□□□□□ -0.39
LINC01090-201ENST00000415357 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
LINC01090-201ENST00000415357 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
LINC01090-201ENST00000415357 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
LINC01090-201ENST00000415357 DPEP1P16444 411 aa12.6□□□□□ -0.39
LINC01090-201ENST00000415357 TBC1D9BQ66K14 1250 aa12.6□□□□□ -0.39
LINC01090-201ENST00000415357 MAMSTRQ6ZN01 415 aa12.6□□□□□ -0.39
LINC01090-201ENST00000415357 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
LINC01090-201ENST00000415357 NRXN2Q9P2S2 1712 aa12.59□□□□□ -0.39
LINC01090-201ENST00000415357 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
LINC01090-201ENST00000415357 CHD4Q14839 1912 aa12.59□□□□□ -0.39
LINC01090-201ENST00000415357 SERPINB2P05120 415 aa12.59□□□□□ -0.39
LINC01090-201ENST00000415357 NPM2Q86SE8 214 aaKnown RBP12.59□□□□□ -0.39
LINC01090-201ENST00000415357 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
LINC01090-201ENST00000415357 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
LINC01090-201ENST00000415357 APAF1O14727 1248 aa12.58□□□□□ -0.4
LINC01090-201ENST00000415357 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
LINC01090-201ENST00000415357 KCNA3P22001 575 aa12.58□□□□□ -0.4
LINC01090-201ENST00000415357 CHRNA5P30532 468 aa12.58□□□□□ -0.4
LINC01090-201ENST00000415357 TGFB2P61812 414 aa12.58□□□□□ -0.4
LINC01090-201ENST00000415357 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
LINC01090-201ENST00000415357 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
LINC01090-201ENST00000415357 ANP32CO43423 234 aa12.57□□□□□ -0.4
LINC01090-201ENST00000415357 KRT24Q2M2I5 525 aa12.57□□□□□ -0.4
LINC01090-201ENST00000415357 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
LINC01090-201ENST00000415357 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
LINC01090-201ENST00000415357 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
LINC01090-201ENST00000415357 MYL6BP14649 208 aa12.56□□□□□ -0.4
LINC01090-201ENST00000415357 MRS2Q9HD23 443 aa12.56□□□□□ -0.4
LINC01090-201ENST00000415357 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
LINC01090-201ENST00000415357 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
LINC01090-201ENST00000415357 ZNF784Q8NCA9 323 aaPredicted RBP12.55□□□□□ -0.4
LINC01090-201ENST00000415357 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
LINC01090-201ENST00000415357 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
LINC01090-201ENST00000415357 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
LINC01090-201ENST00000415357 CHL1O00533 1208 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 ANXA1P04083 346 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 HLFQ16534 295 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 SETDB2Q96T68 719 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
LINC01090-201ENST00000415357 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
LINC01090-201ENST00000415357 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
LINC01090-201ENST00000415357 COL11A2P13942 1736 aaPredicted RBP12.53□□□□□ -0.4
LINC01090-201ENST00000415357 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
LINC01090-201ENST00000415357 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
LINC01090-201ENST00000415357 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
LINC01090-201ENST00000415357 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
LINC01090-201ENST00000415357 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
LINC01090-201ENST00000415357 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
LINC01090-201ENST00000415357 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01090-201ENST00000415357 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
LINC01090-201ENST00000415357 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 NPHP1O15259 732 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 PDIA6Q15084 440 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 CLEC4GQ6UXB4 293 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 LRP10Q7Z4F1 713 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 TMC2Q8TDI7 906 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 MBIPQ9NS73 344 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 MAP3K15Q6ZN16 1313 aa12.51□□□□□ -0.41
LINC01090-201ENST00000415357 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
LINC01090-201ENST00000415357 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
LINC01090-201ENST00000415357 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
LINC01090-201ENST00000415357 NUP98P52948 1817 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 ADCY9O60503 1353 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 C2orf72A6NCS6 295 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 H0YIN7 160 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 GPTP24298 496 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 ST5P78524 1137 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
LINC01090-201ENST00000415357 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
LINC01090-201ENST00000415357 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
LINC01090-201ENST00000415357 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
LINC01090-201ENST00000415357 PDE6BP35913 854 aa12.48□□□□□ -0.41
LINC01090-201ENST00000415357 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
LINC01090-201ENST00000415357 DUSP27Q5VZP5 1158 aa12.48□□□□□ -0.41
LINC01090-201ENST00000415357 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01090-201ENST00000415357 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
LINC01090-201ENST00000415357 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
LINC01090-201ENST00000415357 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 ELL2O00472 640 aaPredicted RBP12.47□□□□□ -0.41
LINC01090-201ENST00000415357 GNAI1P63096 354 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 RASSF7Q02833 373 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 CALD1Q05682 793 aaKnown RBP12.47□□□□□ -0.41
LINC01090-201ENST00000415357 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
LINC01090-201ENST00000415357 COPS6Q7L5N1 327 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
LINC01090-201ENST00000415357 XAGE3Q8WTP9 111 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
LINC01090-201ENST00000415357 CACNA1SQ13698 1873 aa12.46□□□□□ -0.41
LINC01090-201ENST00000415357 PDE4AP27815 886 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms