RNA–Protein interactions for RNA: ENST00000415268.1

SHISA5-202, Transcript of shisa family member 5, humanhuman

TSL 4

Gene SHISA5, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-202ENST00000415268 L3MBTL3Q96JM7 780 aaPredicted RBP23.54■■□□□ 1.36
SHISA5-202ENST00000415268 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
SHISA5-202ENST00000415268 CC2D2BQ6DHV5 1058 aa23.53■■□□□ 1.36
SHISA5-202ENST00000415268 CHADLQ6NUI6 762 aa23.53■■□□□ 1.36
SHISA5-202ENST00000415268 ZNF541Q9H0D2 1346 aa23.53■■□□□ 1.36
SHISA5-202ENST00000415268 NUP98P52948 1817 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 CHL1O00533 1208 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 POTEIP0CG38 1075 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 POTEJP0CG39 1038 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 RBM17Q96I25 401 aaKnown RBP23.52■■□□□ 1.36
SHISA5-202ENST00000415268 PSMD1Q99460 953 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 ADAMTS8Q9UP79 889 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 TRIM35Q9UPQ4 493 aa23.52■■□□□ 1.36
SHISA5-202ENST00000415268 LAS1LQ9Y4W2 734 aaKnown RBP23.52■■□□□ 1.36
SHISA5-202ENST00000415268 COPS6Q7L5N1 327 aa23.51■■□□□ 1.35
SHISA5-202ENST00000415268 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
SHISA5-202ENST00000415268 SNED1Q8TER0 1413 aa23.5■■□□□ 1.35
SHISA5-202ENST00000415268 AIMP1Q12904 312 aaKnown RBP23.5■■□□□ 1.35
SHISA5-202ENST00000415268 KRT24Q2M2I5 525 aa23.5■■□□□ 1.35
SHISA5-202ENST00000415268 C3orf67Q6ZVT6 689 aa23.5■■□□□ 1.35
SHISA5-202ENST00000415268 XAGE3Q8WTP9 111 aa23.5■■□□□ 1.35
SHISA5-202ENST00000415268 NLRP3Q96P20 1036 aa23.5■■□□□ 1.35
SHISA5-202ENST00000415268 CRAMP1Q96RY5 1269 aa23.5■■□□□ 1.35
SHISA5-202ENST00000415268 TAF1DQ9H5J8 278 aaPredicted RBP23.5■■□□□ 1.35
SHISA5-202ENST00000415268 FZD9O00144 591 aa23.49■■□□□ 1.35
SHISA5-202ENST00000415268 HSP90AB3PQ58FF7 597 aa23.49■■□□□ 1.35
SHISA5-202ENST00000415268 JDP2Q8WYK2 163 aa23.49■■□□□ 1.35
SHISA5-202ENST00000415268 PPEF1O14829 653 aaPredicted RBP23.48■■□□□ 1.35
SHISA5-202ENST00000415268 GRIPAP1Q4V328 841 aa23.48■■□□□ 1.35
SHISA5-202ENST00000415268 DDX21Q9NR30 783 aaKnown RBP eCLIP23.48■■□□□ 1.35
SHISA5-202ENST00000415268 TCERG1O14776 1098 aaKnown RBP23.47■■□□□ 1.35
SHISA5-202ENST00000415268 SLC10A5Q5PT55 438 aa23.47■■□□□ 1.35
SHISA5-202ENST00000415268 LDHDQ86WU2 507 aa23.47■■□□□ 1.35
SHISA5-202ENST00000415268 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
SHISA5-202ENST00000415268 HACL1Q9UJ83 578 aa23.47■■□□□ 1.35
SHISA5-202ENST00000415268 RNF123Q5XPI4 1314 aa23.45■■□□□ 1.34
SHISA5-202ENST00000415268 EAPPQ56P03 285 aaPredicted RBP23.45■■□□□ 1.34
SHISA5-202ENST00000415268 SLC51AQ86UW1 340 aa23.45■■□□□ 1.34
SHISA5-202ENST00000415268 NLRP10Q86W26 655 aa23.45■■□□□ 1.34
SHISA5-202ENST00000415268 CHPF2Q9P2E5 772 aa23.45■■□□□ 1.34
SHISA5-202ENST00000415268 EPHX2P34913 555 aa23.44■■□□□ 1.34
SHISA5-202ENST00000415268 EIF6P56537 245 aaKnown RBP23.44■■□□□ 1.34
SHISA5-202ENST00000415268 TCIRG1Q13488 830 aa23.44■■□□□ 1.34
SHISA5-202ENST00000415268 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
SHISA5-202ENST00000415268 GPC2Q8N158 579 aa23.44■■□□□ 1.34
SHISA5-202ENST00000415268 TMX4Q9H1E5 349 aaPredicted RBP23.44■■□□□ 1.34
SHISA5-202ENST00000415268 HOXB7P09629 217 aa23.43■■□□□ 1.34
SHISA5-202ENST00000415268 LARGE2Q8N3Y3 721 aa23.43■■□□□ 1.34
SHISA5-202ENST00000415268 CFAP44Q96MT7 982 aa23.43■■□□□ 1.34
SHISA5-202ENST00000415268 CREBZFQ9NS37 354 aa23.43■■□□□ 1.34
SHISA5-202ENST00000415268 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
SHISA5-202ENST00000415268 PCNTO95613 3336 aa23.42■■□□□ 1.34
SHISA5-202ENST00000415268 ABCC4O15439 1325 aa23.42■■□□□ 1.34
SHISA5-202ENST00000415268 HCLS1P14317 486 aaPredicted RBP23.42■■□□□ 1.34
SHISA5-202ENST00000415268 ATP6V0A2Q9Y487 856 aa23.42■■□□□ 1.34
SHISA5-202ENST00000415268 PNMA8AQ86V59 439 aaPredicted RBP23.41■■□□□ 1.34
SHISA5-202ENST00000415268 CLEC11AQ9Y240 323 aa23.41■■□□□ 1.34
SHISA5-202ENST00000415268 GJA3Q9Y6H8 435 aa23.41■■□□□ 1.34
SHISA5-202ENST00000415268 SCN4AP35499 1836 aa23.4■■□□□ 1.34
SHISA5-202ENST00000415268 SH3TC1Q8TE82 1336 aa23.4■■□□□ 1.34
SHISA5-202ENST00000415268 PASKQ96RG2 1323 aa23.4■■□□□ 1.34
SHISA5-202ENST00000415268 DBF4Q9UBU7 674 aaPredicted RBP23.4■■□□□ 1.34
SHISA5-202ENST00000415268 COL4A5P29400 1685 aa23.39■■□□□ 1.34
SHISA5-202ENST00000415268 DUSP27Q5VZP5 1158 aa23.39■■□□□ 1.33
SHISA5-202ENST00000415268 ANKRD13DQ6ZTN6 518 aa23.39■■□□□ 1.33
SHISA5-202ENST00000415268 NIM1KQ8IY84 436 aa23.39■■□□□ 1.33
SHISA5-202ENST00000415268 PLBD2Q8NHP8 589 aa23.39■■□□□ 1.33
SHISA5-202ENST00000415268 MBIPQ9NS73 344 aa23.39■■□□□ 1.33
SHISA5-202ENST00000415268 APAF1O14727 1248 aa23.38■■□□□ 1.33
SHISA5-202ENST00000415268 PPIP5K2O43314 1243 aa23.38■■□□□ 1.33
SHISA5-202ENST00000415268 BBOX1O75936 387 aa23.38■■□□□ 1.33
SHISA5-202ENST00000415268 ITGBL1O95965 494 aaPredicted RBP23.38■■□□□ 1.33
SHISA5-202ENST00000415268 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
SHISA5-202ENST00000415268 MKRN1Q9UHC7 482 aaKnown RBP23.38■■□□□ 1.33
SHISA5-202ENST00000415268 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
SHISA5-202ENST00000415268 HSPA1AP0DMV8 641 aaKnown RBP23.36■■□□□ 1.33
SHISA5-202ENST00000415268 HSPA1BP0DMV9 641 aaKnown RBP23.36■■□□□ 1.33
SHISA5-202ENST00000415268 LMOD1P29536 600 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-202ENST00000415268 AOC3Q16853 763 aa23.36■■□□□ 1.33
SHISA5-202ENST00000415268 COL13A1Q5TAT6 717 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-202ENST00000415268 SP8Q8IXZ3 490 aa23.36■■□□□ 1.33
SHISA5-202ENST00000415268 SUPT20HQ8NEM7 779 aa23.36■■□□□ 1.33
SHISA5-202ENST00000415268 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
SHISA5-202ENST00000415268 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
SHISA5-202ENST00000415268 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
SHISA5-202ENST00000415268 GRAPQ13588 217 aa23.35■■□□□ 1.33
SHISA5-202ENST00000415268 MAP1SQ66K74 1059 aaPredicted RBP23.35■■□□□ 1.33
SHISA5-202ENST00000415268 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
SHISA5-202ENST00000415268 GRAPLQ8TC17 118 aaPredicted RBP23.35■■□□□ 1.33
SHISA5-202ENST00000415268 ISCA1Q9BUE6 129 aa23.35■■□□□ 1.33
SHISA5-202ENST00000415268 RTFDC1Q9BY42 306 aaPredicted RBP23.35■■□□□ 1.33
SHISA5-202ENST00000415268 IFT57Q9NWB7 429 aa23.35■■□□□ 1.33
SHISA5-202ENST00000415268 TMEM88BA6NKF7 163 aa23.34■■□□□ 1.33
SHISA5-202ENST00000415268 ATP5J2-PTCD1G3V325 749 aa23.34■■□□□ 1.33
SHISA5-202ENST00000415268 SCNN1DP51172 638 aa23.34■■□□□ 1.33
SHISA5-202ENST00000415268 CALD1Q05682 793 aaKnown RBP23.34■■□□□ 1.33
SHISA5-202ENST00000415268 CNTROBQ8N137 903 aa23.34■■□□□ 1.33
SHISA5-202ENST00000415268 MPNDQ8N594 471 aa23.34■■□□□ 1.33
SHISA5-202ENST00000415268 GNAI1P63096 354 aa23.33■■□□□ 1.33
SHISA5-202ENST00000415268 ANKRD36CQ5JPF3 1778 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms