RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 JUNDP17535 347 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 APLP1P51693 650 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 ADGRD1Q6QNK2 874 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 NLRP13Q86W25 1043 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 UNC5CLQ8IV45 518 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 SPNS2Q8IVW8 549 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 STRN4Q9NRL3 753 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 TERF2IPQ9NYB0 399 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 TRPC5Q9UL62 973 aaPredicted RBP6.75□□□□□ -1.33
VPS41-205ENST00000414632 PCDHB3Q9Y5E6 796 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 ANKRD26Q9UPS8 1709 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 EDC4Q6P2E9 1401 aaKnown RBP6.75□□□□□ -1.33
VPS41-205ENST00000414632 TTC21AQ8NDW8 1320 aa6.75□□□□□ -1.33
VPS41-205ENST00000414632 BRD4O60885 1362 aaPredicted RBP6.74□□□□□ -1.33
VPS41-205ENST00000414632 ANKRD36BQ8N2N9 1353 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 SOWAHBA6NEL2 793 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 GOLGA8CPA6NN73 597 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 C11orf95C9JLR9 678 aaPredicted RBP6.74□□□□□ -1.33
VPS41-205ENST00000414632 GCP02774 474 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 SKIP12755 728 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 CTHP32929 405 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 RBM6P78332 1123 aaKnown RBP6.74□□□□□ -1.33
VPS41-205ENST00000414632 LSM11P83369 360 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS41-205ENST00000414632 PTPRNQ16849 979 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 FOXD4L5Q5VV16 416 aaPredicted RBP6.74□□□□□ -1.33
VPS41-205ENST00000414632 FOXD4L4Q8WXT5 416 aaPredicted RBP6.74□□□□□ -1.33
VPS41-205ENST00000414632 HPS5Q9UPZ3 1129 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 IVNS1ABPQ9Y6Y0 642 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 EP400Q96L91 3159 aa6.74□□□□□ -1.33
VPS41-205ENST00000414632 ZC3H4Q9UPT8 1303 aaKnown RBP6.74□□□□□ -1.33
VPS41-205ENST00000414632 NINLQ9Y2I6 1382 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 A0A0G2JS52 829 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 USP17L3A6NCW0 530 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 USP17L4A6NCW7 530 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 HRO43593 1189 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 FBLN1P23142 703 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 MYT1Q01538 1121 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 USP17L2Q6R6M4 530 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 USP17L1Q7RTZ2 530 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 NSD3Q9BZ95 1437 aa6.73□□□□□ -1.33
VPS41-205ENST00000414632 MAP2P11137 1827 aaKnown RBP6.73□□□□□ -1.33
VPS41-205ENST00000414632 COL5A2P05997 1499 aaPredicted RBP6.73□□□□□ -1.33
VPS41-205ENST00000414632 CDK12Q9NYV4 1490 aaPredicted RBP6.73□□□□□ -1.33
VPS41-205ENST00000414632 CPDO75976 1380 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 BCAMP50895 628 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 ELOAQ14241 798 aaKnown RBP6.72□□□□□ -1.33
VPS41-205ENST00000414632 VPS72Q15906 364 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 DEPDC4Q8N2C3 294 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 PUS7Q96PZ0 661 aaKnown RBP6.72□□□□□ -1.33
VPS41-205ENST00000414632 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 EVA1BQ9NVM1 165 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 CEP126Q9P2H0 1117 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 TSR3Q9UJK0 312 aaKnown RBP6.72□□□□□ -1.33
VPS41-205ENST00000414632 OVOS2A0A0J9YW53 1432 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 OVOS2Q6IE36 1432 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 PEAK1Q9H792 1746 aa6.72□□□□□ -1.33
VPS41-205ENST00000414632 USP31Q70CQ4 1352 aa6.71□□□□□ -1.33
VPS41-205ENST00000414632 USP17L5A8MUK1 530 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 EVA1CP58658 441 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 PTK2Q05397 1052 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 TMEM164Q5U3C3 297 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 LARP1Q6PKG0 1096 aaKnown RBP6.71□□□□□ -1.34
VPS41-205ENST00000414632 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 FAM174AQ8TBP5 190 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 STK32AQ8WU08 396 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 CARD14Q9BXL6 1004 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 ZMIZ1Q9ULJ6 1067 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 KIF7Q2M1P5 1343 aa6.71□□□□□ -1.34
VPS41-205ENST00000414632 PARP4Q9UKK3 1724 aaKnown RBP6.7□□□□□ -1.34
VPS41-205ENST00000414632 LRRC37A3O60309 1634 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 CCNYL3P0C7X3 344 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 PDXDC2PQ6P474 469 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 SND1Q7KZF4 910 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS41-205ENST00000414632 SEPT12Q8IYM1 358 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 FAM160A2Q8N612 972 aaPredicted RBP6.7□□□□□ -1.34
VPS41-205ENST00000414632 KCNH5Q8NCM2 988 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 ARMC2Q8NEN0 867 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 COG3Q96JB2 828 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 MKRN1Q9UHC7 482 aaKnown RBP6.7□□□□□ -1.34
VPS41-205ENST00000414632 NOVA2Q9UNW9 492 aaKnown RBP6.7□□□□□ -1.34
VPS41-205ENST00000414632 SPATA31A5Q5VU36 1347 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 SPATA31A7Q8IWB4 1347 aa6.7□□□□□ -1.34
VPS41-205ENST00000414632 AATKQ6ZMQ8 1374 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 FAM208AQ9UK61 1670 aaKnown RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 FYB1O15117 783 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 DXOO77932 396 aaKnown RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 KCNH2Q12809 1159 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 CNGB1Q14028 1251 aaPredicted RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 RRS1Q15050 365 aaKnown RBP6.69□□□□□ -1.34
VPS41-205ENST00000414632 CCDC27Q2M243 656 aa6.69□□□□□ -1.34
VPS41-205ENST00000414632 MSS51Q4VC12 460 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms