RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 MAPK8IP3Q9UPT6 1336 aa23.14■■□□□ 1.3
SMIM29-203ENST00000413013 LMOD1P29536 600 aaPredicted RBP23.14■■□□□ 1.29
SMIM29-203ENST00000413013 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.29
SMIM29-203ENST00000413013 MYL6BP14649 208 aa23.13■■□□□ 1.29
SMIM29-203ENST00000413013 PNNQ9H307 717 aaKnown RBP23.13■■□□□ 1.29
SMIM29-203ENST00000413013 SNED1Q8TER0 1413 aa23.13■■□□□ 1.29
SMIM29-203ENST00000413013 FOXN1O15353 648 aa23.12■■□□□ 1.29
SMIM29-203ENST00000413013 ITGBL1O95965 494 aaPredicted RBP23.12■■□□□ 1.29
SMIM29-203ENST00000413013 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
SMIM29-203ENST00000413013 NFE2L2Q16236 605 aa23.12■■□□□ 1.29
SMIM29-203ENST00000413013 ZBTB3Q9H5J0 574 aa23.12■■□□□ 1.29
SMIM29-203ENST00000413013 ERBB4Q15303 1308 aa23.11■■□□□ 1.29
SMIM29-203ENST00000413013 GPTP24298 496 aa23.11■■□□□ 1.29
SMIM29-203ENST00000413013 VEGFBP49765 207 aa23.11■■□□□ 1.29
SMIM29-203ENST00000413013 TTLL7Q6ZT98 887 aa23.11■■□□□ 1.29
SMIM29-203ENST00000413013 CNTROBQ8N137 903 aa23.11■■□□□ 1.29
SMIM29-203ENST00000413013 RBM17Q96I25 401 aaKnown RBP23.11■■□□□ 1.29
SMIM29-203ENST00000413013 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
SMIM29-203ENST00000413013 GJA3Q9Y6H8 435 aa23.11■■□□□ 1.29
SMIM29-203ENST00000413013 UBN2Q6ZU65 1347 aa23.1■■□□□ 1.29
SMIM29-203ENST00000413013 PPEF1O14829 653 aaPredicted RBP23.1■■□□□ 1.29
SMIM29-203ENST00000413013 HOXA10P31260 410 aaPredicted RBP23.1■■□□□ 1.29
SMIM29-203ENST00000413013 CTCFP49711 727 aaPredicted RBP23.1■■□□□ 1.29
SMIM29-203ENST00000413013 MAP1SQ66K74 1059 aaPredicted RBP23.1■■□□□ 1.29
SMIM29-203ENST00000413013 LARGE2Q8N3Y3 721 aa23.1■■□□□ 1.29
SMIM29-203ENST00000413013 PRDM10Q9NQV6 1147 aa23.1■■□□□ 1.29
SMIM29-203ENST00000413013 PPP1R42Q7Z4L9 355 aa23.09■■□□□ 1.29
SMIM29-203ENST00000413013 PARP10Q53GL7 1025 aa23.08■■□□□ 1.29
SMIM29-203ENST00000413013 CRAMP1Q96RY5 1269 aa23.08■■□□□ 1.29
SMIM29-203ENST00000413013 PLEKHF1Q96S99 279 aa23.08■■□□□ 1.29
SMIM29-203ENST00000413013 ABT1Q9ULW3 272 aaKnown RBP23.08■■□□□ 1.29
SMIM29-203ENST00000413013 RASSF10A6NK89 507 aa23.07■■□□□ 1.28
SMIM29-203ENST00000413013 SUSD4Q5VX71 490 aa23.07■■□□□ 1.28
SMIM29-203ENST00000413013 GIGYF2Q6Y7W6 1299 aaKnown RBP23.07■■□□□ 1.28
SMIM29-203ENST00000413013 NIM1KQ8IY84 436 aa23.07■■□□□ 1.28
SMIM29-203ENST00000413013 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
SMIM29-203ENST00000413013 COL4A5P29400 1685 aa23.06■■□□□ 1.28
SMIM29-203ENST00000413013 NTSR2O95665 410 aa23.06■■□□□ 1.28
SMIM29-203ENST00000413013 DEFB115Q30KQ5 88 aa23.06■■□□□ 1.28
SMIM29-203ENST00000413013 ZNF34Q8IZ26 560 aa23.06■■□□□ 1.28
SMIM29-203ENST00000413013 TSPYL4Q9UJ04 414 aa23.05■■□□□ 1.28
SMIM29-203ENST00000413013 LTBP1Q14766 1721 aa23.05■■□□□ 1.28
SMIM29-203ENST00000413013 NLRP3Q96P20 1036 aa23.04■■□□□ 1.28
SMIM29-203ENST00000413013 WBP1LQ9NX94 342 aa23.04■■□□□ 1.28
SMIM29-203ENST00000413013 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
SMIM29-203ENST00000413013 PPIP5K2O43314 1243 aa23.03■■□□□ 1.28
SMIM29-203ENST00000413013 MAP2K1Q02750 393 aaPredicted RBP23.03■■□□□ 1.28
SMIM29-203ENST00000413013 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
SMIM29-203ENST00000413013 ANKRD36CQ5JPF3 1778 aa23.02■■□□□ 1.28
SMIM29-203ENST00000413013 SCNN1DP51172 638 aa23.02■■□□□ 1.28
SMIM29-203ENST00000413013 USP50Q70EL3 339 aaPredicted RBP23.02■■□□□ 1.28
SMIM29-203ENST00000413013 UTP14AQ9BVJ6 771 aaKnown RBP23.02■■□□□ 1.28
SMIM29-203ENST00000413013 WDR33Q9C0J8 1336 aaKnown RBP23.02■■□□□ 1.28
SMIM29-203ENST00000413013 PAXIP1Q6ZW49 1069 aaPredicted RBP23.01■■□□□ 1.27
SMIM29-203ENST00000413013 SUPT20HQ8NEM7 779 aa23.01■■□□□ 1.27
SMIM29-203ENST00000413013 VPS33BQ9H267 617 aa23.01■■□□□ 1.27
SMIM29-203ENST00000413013 THSD7BQ9C0I4 1608 aa23■■□□□ 1.27
SMIM29-203ENST00000413013 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
SMIM29-203ENST00000413013 EPS15P42566 896 aa23■■□□□ 1.27
SMIM29-203ENST00000413013 LBX1P52954 281 aa23■■□□□ 1.27
SMIM29-203ENST00000413013 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
SMIM29-203ENST00000413013 ATP6V0A2Q9Y487 856 aa23■■□□□ 1.27
SMIM29-203ENST00000413013 TRPM7Q96QT4 1865 aa23■■□□□ 1.27
SMIM29-203ENST00000413013 ECE1P42892 770 aa22.99■■□□□ 1.27
SMIM29-203ENST00000413013 AOC3Q16853 763 aa22.99■■□□□ 1.27
SMIM29-203ENST00000413013 HSP90AB3PQ58FF7 597 aa22.99■■□□□ 1.27
SMIM29-203ENST00000413013 C3orf67Q6ZVT6 689 aa22.98■■□□□ 1.27
SMIM29-203ENST00000413013 BEGAINQ9BUH8 593 aa22.98■■□□□ 1.27
SMIM29-203ENST00000413013 BABAM1Q9NWV8 329 aa22.98■■□□□ 1.27
SMIM29-203ENST00000413013 ABCC4O15439 1325 aa22.98■■□□□ 1.27
SMIM29-203ENST00000413013 ADARB2Q9NS39 739 aaKnown RBP22.97■■□□□ 1.27
SMIM29-203ENST00000413013 LAMB2P55268 1798 aa22.96■■□□□ 1.27
SMIM29-203ENST00000413013 HSPA8P11142 646 aaKnown RBP22.96■■□□□ 1.27
SMIM29-203ENST00000413013 RIPK4P57078 832 aa22.96■■□□□ 1.27
SMIM29-203ENST00000413013 DPP8Q6V1X1 898 aaPredicted RBP22.96■■□□□ 1.27
SMIM29-203ENST00000413013 SLC10A5Q5PT55 438 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 LRP10Q7Z4F1 713 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 SLC51AQ86UW1 340 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 CAPNS2Q96L46 248 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 CDHR2Q9BYE9 1310 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 GPRC5DQ9NZD1 345 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 ZNRF3Q9ULT6 936 aa22.95■■□□□ 1.26
SMIM29-203ENST00000413013 GRM1Q13255 1194 aa22.94■■□□□ 1.26
SMIM29-203ENST00000413013 PDIA6Q15084 440 aa22.94■■□□□ 1.26
SMIM29-203ENST00000413013 BBOX1O75936 387 aa22.93■■□□□ 1.26
SMIM29-203ENST00000413013 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
SMIM29-203ENST00000413013 PROSER3Q2NL68 480 aa22.93■■□□□ 1.26
SMIM29-203ENST00000413013 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
SMIM29-203ENST00000413013 MPNDQ8N594 471 aa22.93■■□□□ 1.26
SMIM29-203ENST00000413013 RTFDC1Q9BY42 306 aaPredicted RBP22.93■■□□□ 1.26
SMIM29-203ENST00000413013 ANXA1P04083 346 aa22.92■■□□□ 1.26
SMIM29-203ENST00000413013 AIMP1Q12904 312 aaKnown RBP22.92■■□□□ 1.26
SMIM29-203ENST00000413013 SP8Q8IXZ3 490 aa22.92■■□□□ 1.26
SMIM29-203ENST00000413013 SH3TC1Q8TE82 1336 aa22.91■■□□□ 1.26
SMIM29-203ENST00000413013 TRAF5O00463 557 aa22.91■■□□□ 1.26
SMIM29-203ENST00000413013 TNIP1Q15025 636 aa22.91■■□□□ 1.26
SMIM29-203ENST00000413013 CIAPIN1Q6FI81 312 aa22.91■■□□□ 1.26
SMIM29-203ENST00000413013 COPS6Q7L5N1 327 aa22.91■■□□□ 1.26
SMIM29-203ENST00000413013 NLRP10Q86W26 655 aa22.91■■□□□ 1.26
SMIM29-203ENST00000413013 XAGE3Q8WTP9 111 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms