RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GTF3C6Q969F1 213 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 UBA5Q9GZZ9 404 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 TMEM98Q9Y2Y6 226 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 KIAA0586Q9BVV6 1533 aa6.12□□□□□ -1.43
HERC4-205ENST00000412272 MYOM1P52179 1685 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 LAMC3Q9Y6N6 1575 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 CFTRP13569 1480 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 PLA2R1Q13018 1463 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 TMCO5BA8MYB1 307 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 NUCB2P80303 420 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 USP4Q13107 963 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 LSM14AQ8ND56 463 aaKnown RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 GIMAP7Q8NHV1 300 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 DNAAF4Q8WXU2 420 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 RABL2BQ9UNT1 228 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 SMTNL1A8MU46 457 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 F8VZ95 297 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 TEX35Q5T0J7 233 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 GORABQ5T7V8 394 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 CWC27Q6UX04 472 aaKnown RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 SPATA21Q7Z572 469 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 SAPCD2Q86UD0 394 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 TEKT1Q969V4 418 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 DHRS1Q96LJ7 313 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 GPBP1L1Q9HC44 474 aaPredicted RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 HOXA10P31260 410 aaPredicted RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 MRPL12P52815 198 aaKnown RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 NEDD9Q14511 834 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 INF2Q27J81 1249 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 SAMD3Q8N6K7 520 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 MRFAP1L1Q96HT8 127 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 POLR3CQ9BUI4 534 aaPredicted RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 TTC12Q9H892 705 aaPredicted RBP6.11□□□□□ -1.43
HERC4-205ENST00000412272 PSD3Q9NYI0 1048 aa6.11□□□□□ -1.43
HERC4-205ENST00000412272 SHTN1A0MZ66 631 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 K7ELQ4 463 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 PREPLQ4J6C6 727 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 ACBD5Q5T8D3 534 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 MYSM1Q5VVJ2 828 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 TAX1BP1Q86VP1 789 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 CTCFLQ8NI51 663 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 CCDC34Q96HJ3 373 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 IQSEC2Q5JU85 1478 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 XBP1P17861 261 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 HNRNPH1P31943 449 aaKnown RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 MNAT1P51948 309 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 PSMC1P62191 440 aaKnown RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 ZFYVE27Q5T4F4 411 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 THRAP3Q9Y2W1 955 aaKnown RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 SHPRHQ149N8 1683 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 DISP1Q96F81 1524 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 PEX14O75381 377 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 PTK7Q13308 1070 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 CDCA2Q69YH5 1023 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 NUTM1Q86Y26 1132 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 N4BP2L2Q92802 583 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 KIF9Q9HAQ2 790 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 PDZRN3Q9UPQ7 1066 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 IQGAP1P46940 1657 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 CSB-PGBD3P0DP91 1061 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 ZNF394Q53GI3 561 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 GBP6Q6ZN66 633 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 TTC30BQ8N4P2 665 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 EZH1Q92800 747 aaPredicted RBP6.1□□□□□ -1.43
HERC4-205ENST00000412272 TRIM7Q9C029 511 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 UNC45AQ9H3U1 944 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 SPATA7Q9P0W8 599 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 MAPK8IP1Q9UQF2 711 aa6.1□□□□□ -1.43
HERC4-205ENST00000412272 RPS6KA5O75582 802 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 RTN3O95197 1032 aaPredicted RBP6.09□□□□□ -1.43
HERC4-205ENST00000412272 MBD3O95983 291 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 CYP11B2P19099 503 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 GPTP24298 496 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 ACTN2P35609 894 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 MECOMQ03112 1051 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 TADA2BQ86TJ2 420 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 ZBTB10Q96DT7 871 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 ANKIB1Q9P2G1 1089 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 NUP160Q12769 1436 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 CCDC141Q6ZP82 1450 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 STIP1P31948 543 aaKnown RBP6.09□□□□□ -1.43
HERC4-205ENST00000412272 ABL2P42684 1182 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 CHMP7Q8WUX9 453 aaPredicted RBP6.09□□□□□ -1.43
HERC4-205ENST00000412272 NACA2Q9H009 215 aa6.09□□□□□ -1.43
HERC4-205ENST00000412272 V9GYY5 206 aaPredicted RBP6.09□□□□□ -1.43
HERC4-205ENST00000412272 PNMA6AP0CW24 399 aaPredicted RBP6.09□□□□□ -1.44
HERC4-205ENST00000412272 H2AFXP16104 143 aaPredicted RBP6.09□□□□□ -1.44
HERC4-205ENST00000412272 GJA8P48165 433 aa6.09□□□□□ -1.44
HERC4-205ENST00000412272 SCRN1Q12765 414 aa6.09□□□□□ -1.44
HERC4-205ENST00000412272 UHMK1Q8TAS1 419 aaKnown RBP6.09□□□□□ -1.44
HERC4-205ENST00000412272 AGBL1Q96MI9 1066 aa6.09□□□□□ -1.44
HERC4-205ENST00000412272 PHACTR1Q9C0D0 580 aa6.09□□□□□ -1.44
HERC4-205ENST00000412272 SASH1O94885 1247 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 IVLP07476 585 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 VCAM1P19320 739 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 CAVIN1Q6NZI2 390 aaKnown RBP6.08□□□□□ -1.44
HERC4-205ENST00000412272 FOXR1Q6PIV2 292 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 TMEM110Q86TL2 294 aa6.08□□□□□ -1.44
HERC4-205ENST00000412272 CFAP53Q96M91 514 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms