RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 RAB11FIP4Q86YS3 637 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 L3MBTL3Q96JM7 780 aaPredicted RBP5.23□□□□□ -1.57
PTPN13-202ENST00000411767 INTS13Q9NVM9 706 aa5.23□□□□□ -1.57
PTPN13-202ENST00000411767 GIPC1O14908 333 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 SSFA2P28290 1259 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 USH1GQ495M9 461 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 ZNF280CQ8ND82 737 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 WDR60Q8WVS4 1066 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 GINS4Q9BRT9 223 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 MYO15BQ96JP2 1530 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 PDCP20941 246 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 AP1S2P56377 157 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 TTC31Q49AM3 519 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 SESN1Q9Y6P5 492 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 BRPF1P55201 1214 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 SELENOSQ9BQE4 189 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 TBCAO75347 108 aaKnown RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 IFIT2P09913 472 aaKnown RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 XRCC6P12956 609 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 MAP3K10Q02779 954 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 NEK11Q8NG66 645 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 TXNDC16Q9P2K2 825 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 CETN3O15182 167 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 ZBTB24O43167 697 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 RHOBTB1O94844 696 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 MAPK8IP2Q13387 824 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 SDCCAG3Q96C92 435 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 JADE2Q9NQC1 790 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 RNF216Q9NWF9 866 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 VPS18Q9P253 973 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 WASHC2CQ9Y4E1 1318 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 HIP1RO75146 1068 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 PPFIA4O75335 1185 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC159P0C7I6 412 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 ATP5DP30049 168 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 PCK1P35558 622 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 TTC19Q6DKK2 380 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 ARHGAP18Q8N392 663 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 TSPY26PQ9H489 355 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 ARFGAP3Q9NP61 516 aa5.22□□□□□ -1.57
PTPN13-202ENST00000411767 LARSQ9P2J5 1176 aaKnown RBP5.22□□□□□ -1.57
PTPN13-202ENST00000411767 GOLGA8BA8MQT2 603 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 TMEM232C9JQI7 657 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 ELL2O00472 640 aaPredicted RBP5.21□□□□□ -1.57
PTPN13-202ENST00000411767 ZNF263O14978 683 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 PFDN1O60925 122 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 FAM13AO94988 1023 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 HMGB2P26583 209 aaKnown RBP5.21□□□□□ -1.57
PTPN13-202ENST00000411767 RPGRQ92834 1020 aaKnown RBP5.21□□□□□ -1.57
PTPN13-202ENST00000411767 GBP5Q96PP8 586 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 DCDC2Q9UHG0 476 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 TSPY2A6NKD2 308 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 TSPY3P0CV98 308 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 TSPY8P0CW00 308 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 AMPHP49418 695 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 TSPY1Q01534 308 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 CROCCP2Q86T23 111 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 SYCP3Q8IZU3 236 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 CCDC63Q8NA47 563 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 ZC3H15Q8WU90 426 aaKnown RBP5.21□□□□□ -1.57
PTPN13-202ENST00000411767 EVI5LQ96CN4 794 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 PDCD10Q9BUL8 212 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 PALMDQ9NP74 551 aa5.21□□□□□ -1.57
PTPN13-202ENST00000411767 PSMA3P25788 255 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 DYNC1I2Q13409 638 aaKnown RBP5.21□□□□□ -1.58
PTPN13-202ENST00000411767 MUM1L1Q5H9M0 696 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 GSDMBQ8TAX9 411 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 PARVBQ9HBI1 364 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 KDM2AQ9Y2K7 1162 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 KRT7P08729 469 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 C4BPBP20851 252 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 RAB3GAP1Q15042 981 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 TTC1Q99614 292 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 RABEP2Q9H5N1 569 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 U3KPZ7 1027 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-202ENST00000411767 ROCK1Q13464 1354 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 KRT5P13647 590 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 NEK2P51955 445 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 TMTC1Q8IUR5 882 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 MAP7D3Q8IWC1 876 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 IFT81Q8WYA0 676 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 ZNF653Q96CK0 615 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 NLRP4Q96MN2 994 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 SMARCAD1Q9H4L7 1026 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 PRDM5Q9NQX1 630 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-202ENST00000411767 TXLNGQ9NUQ3 528 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 USP25Q9UHP3 1055 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 MAD1L1Q9Y6D9 718 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 SCINQ9Y6U3 715 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 RASGRF2O14827 1237 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 TUBB4BP68371 445 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 CEP85LQ5SZL2 805 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 FOXD4L5Q5VV16 416 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-202ENST00000411767 FOXD4L4Q8WXT5 416 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-202ENST00000411767 AIPL1Q9NZN9 384 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 BUB1BO60566 1050 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-202ENST00000411767 RCSD1Q6JBY9 416 aa5.21□□□□□ -1.58
PTPN13-202ENST00000411767 TSC22D1Q15714 1073 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 KRT74Q7RTS7 529 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms