RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CHMP4AQ9BY43 222 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 NYXQ9GZU5 481 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
NEDD1-202ENST00000411739 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-202ENST00000411739 PARP10Q53GL7 1025 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
NEDD1-202ENST00000411739 DDX58O95786 925 aaKnown RBP15.34■□□□□ 0.05
NEDD1-202ENST00000411739 FKBP5Q13451 457 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-202ENST00000411739 ADCY9O60503 1353 aa15.34■□□□□ 0.05
NEDD1-202ENST00000411739 F6X3S4 739 aa15.34■□□□□ 0.05
NEDD1-202ENST00000411739 KSR2Q6VAB6 950 aa15.34■□□□□ 0.05
NEDD1-202ENST00000411739 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
NEDD1-202ENST00000411739 SRGNP10124 158 aa15.33■□□□□ 0.04
NEDD1-202ENST00000411739 METTL22Q9BUU2 404 aaPredicted RBP15.33■□□□□ 0.04
NEDD1-202ENST00000411739 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
NEDD1-202ENST00000411739 TTLL6Q8N841 843 aa15.33■□□□□ 0.04
NEDD1-202ENST00000411739 GRIN3BO60391 1043 aa15.32■□□□□ 0.04
NEDD1-202ENST00000411739 CWF19L2Q2TBE0 894 aaKnown RBP15.32■□□□□ 0.04
NEDD1-202ENST00000411739 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
NEDD1-202ENST00000411739 ARFGEF2Q9Y6D5 1785 aa15.32■□□□□ 0.04
NEDD1-202ENST00000411739 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
NEDD1-202ENST00000411739 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
NEDD1-202ENST00000411739 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
NEDD1-202ENST00000411739 TNRC6CQ9HCJ0 1690 aaKnown RBP15.31■□□□□ 0.04
NEDD1-202ENST00000411739 MRPL50Q8N5N7 158 aaKnown RBP15.31■□□□□ 0.04
NEDD1-202ENST00000411739 MASTLQ96GX5 879 aa15.31■□□□□ 0.04
NEDD1-202ENST00000411739 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
NEDD1-202ENST00000411739 BRCA1P38398 1863 aaKnown RBP15.3■□□□□ 0.04
NEDD1-202ENST00000411739 C21orf2O43822 256 aa15.3■□□□□ 0.04
NEDD1-202ENST00000411739 OLFM4Q6UX06 510 aa15.3■□□□□ 0.04
NEDD1-202ENST00000411739 SH3TC1Q8TE82 1336 aa15.3■□□□□ 0.04
NEDD1-202ENST00000411739 KLRG2A4D1S0 409 aaPredicted RBP15.29■□□□□ 0.04
NEDD1-202ENST00000411739 YY1P25490 414 aa15.29■□□□□ 0.04
NEDD1-202ENST00000411739 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
NEDD1-202ENST00000411739 NPR1P16066 1061 aa15.28■□□□□ 0.04
NEDD1-202ENST00000411739 TRIM28Q13263 835 aaKnown RBP15.28■□□□□ 0.04
NEDD1-202ENST00000411739 STYK1Q6J9G0 422 aa15.28■□□□□ 0.04
NEDD1-202ENST00000411739 PRPF40BQ6NWY9 871 aaKnown RBP15.28■□□□□ 0.04
NEDD1-202ENST00000411739 NLRP3Q96P20 1036 aa15.28■□□□□ 0.04
NEDD1-202ENST00000411739 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
NEDD1-202ENST00000411739 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
NEDD1-202ENST00000411739 NEXNQ0ZGT2 675 aa15.28■□□□□ 0.04
NEDD1-202ENST00000411739 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
NEDD1-202ENST00000411739 SLC4A10Q6U841 1118 aa15.27■□□□□ 0.04
NEDD1-202ENST00000411739 RPGRQ92834 1020 aaKnown RBP15.27■□□□□ 0.04
NEDD1-202ENST00000411739 CNKSR1Q969H4 720 aa15.27■□□□□ 0.04
NEDD1-202ENST00000411739 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
NEDD1-202ENST00000411739 NEURL1BA8MQ27 555 aa15.27■□□□□ 0.03
NEDD1-202ENST00000411739 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.03
NEDD1-202ENST00000411739 RASSF7Q02833 373 aa15.27■□□□□ 0.03
NEDD1-202ENST00000411739 CRY2Q49AN0 593 aa15.27■□□□□ 0.03
NEDD1-202ENST00000411739 CCDC191Q8NCU4 936 aa15.27■□□□□ 0.03
NEDD1-202ENST00000411739 CCDC85AQ96PX6 553 aaPredicted RBP15.27■□□□□ 0.03
NEDD1-202ENST00000411739 SLX4Q8IY92 1834 aa15.27■□□□□ 0.03
NEDD1-202ENST00000411739 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
NEDD1-202ENST00000411739 PDZRN3Q9UPQ7 1066 aa15.26■□□□□ 0.03
NEDD1-202ENST00000411739 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
NEDD1-202ENST00000411739 CACNA1SQ13698 1873 aa15.26■□□□□ 0.03
NEDD1-202ENST00000411739 DLEC1Q9Y238 1755 aa15.26■□□□□ 0.03
NEDD1-202ENST00000411739 UBE3BQ7Z3V4 1068 aa15.24■□□□□ 0.03
NEDD1-202ENST00000411739 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
NEDD1-202ENST00000411739 YTHDC1Q96MU7 727 aaKnown RBP15.24■□□□□ 0.03
NEDD1-202ENST00000411739 PCCAP05165 728 aaPredicted RBP15.24■□□□□ 0.03
NEDD1-202ENST00000411739 PRELPP51888 382 aa15.24■□□□□ 0.03
NEDD1-202ENST00000411739 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
NEDD1-202ENST00000411739 BEND3Q5T5X7 828 aa15.24■□□□□ 0.03
NEDD1-202ENST00000411739 RNF123Q5XPI4 1314 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 ALDH1B1P30837 517 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 GCKRQ14397 625 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
NEDD1-202ENST00000411739 CACNA1FO60840 1977 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 BCAR3O75815 825 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
NEDD1-202ENST00000411739 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 LINS1Q8NG48 757 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 C7orf43Q8WVR3 580 aa15.23■□□□□ 0.03
NEDD1-202ENST00000411739 ARFGEF1Q9Y6D6 1849 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 ABCC4O15439 1325 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 NFKBIEO00221 500 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 SEC31BQ9NQW1 1179 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 TAF1P21675 1872 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
NEDD1-202ENST00000411739 RIC1Q4ADV7 1423 aa15.22■□□□□ 0.03
NEDD1-202ENST00000411739 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.03
NEDD1-202ENST00000411739 CHD4Q14839 1912 aa15.21■□□□□ 0.03
NEDD1-202ENST00000411739 LAMB2P55268 1798 aa15.21■□□□□ 0.03
NEDD1-202ENST00000411739 H7C1W4 665 aa15.21■□□□□ 0.02
NEDD1-202ENST00000411739 CT47B1P0C2W7 299 aaPredicted RBP15.21■□□□□ 0.02
NEDD1-202ENST00000411739 ZNF526Q8TF50 670 aaPredicted RBP15.21■□□□□ 0.02
NEDD1-202ENST00000411739 CELF1Q92879 486 aaKnown RBP15.21■□□□□ 0.02
NEDD1-202ENST00000411739 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.02
NEDD1-202ENST00000411739 PPEF1O14829 653 aaPredicted RBP15.2■□□□□ 0.02
NEDD1-202ENST00000411739 RNF181Q9P0P0 153 aa15.2■□□□□ 0.02
NEDD1-202ENST00000411739 TNNQ9UQP3 1299 aa15.2■□□□□ 0.02
NEDD1-202ENST00000411739 PDE8AO60658 829 aa15.2■□□□□ 0.02
NEDD1-202ENST00000411739 SF3B3Q15393 1217 aaKnown RBP15.2■□□□□ 0.02
NEDD1-202ENST00000411739 SRCIN1Q9C0H9 1055 aa15.2■□□□□ 0.02
NEDD1-202ENST00000411739 COL4A1P02462 1669 aa15.2■□□□□ 0.02
NEDD1-202ENST00000411739 FRAT1Q92837 279 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms