RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 INPP5BP32019 993 aa8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 NPM2Q86SE8 214 aaKnown RBP8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 NPAS4Q8IUM7 802 aa8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 GJD3Q8N144 294 aa8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 GMCL1Q96IK5 515 aa8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 BCL2L13Q9BXK5 485 aa8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
RNU4-27P-201ENST00000410889 OPLAHO14841 1288 aa8.64□□□□□ -1.03
RNU4-27P-201ENST00000410889 SNRPBP14678 240 aaKnown RBP8.64□□□□□ -1.03
RNU4-27P-201ENST00000410889 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
RNU4-27P-201ENST00000410889 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
RNU4-27P-201ENST00000410889 ZCCHC2Q9C0B9 1178 aaKnown RBP8.64□□□□□ -1.03
RNU4-27P-201ENST00000410889 PCDHGC4Q9Y5F7 938 aa8.64□□□□□ -1.03
RNU4-27P-201ENST00000410889 KHNYNO15037 678 aaKnown RBP8.63□□□□□ -1.03
RNU4-27P-201ENST00000410889 FAM157BP0CG42 384 aa8.63□□□□□ -1.03
RNU4-27P-201ENST00000410889 ITGA6P23229 1130 aa8.63□□□□□ -1.03
RNU4-27P-201ENST00000410889 COL19A1Q14993 1142 aa8.63□□□□□ -1.03
RNU4-27P-201ENST00000410889 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
RNU4-27P-201ENST00000410889 DCDC2BA2VCK2 349 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 TREHO43280 583 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 NEFLP07196 543 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 PLCB3Q01970 1234 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 EAPPQ56P03 285 aaPredicted RBP8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 FOXR1Q6PIV2 292 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 ALKBH8Q96BT7 664 aaKnown RBP8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
RNU4-27P-201ENST00000410889 MAPK8P45983 427 aa8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 RBM25P49756 843 aaKnown RBP8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 DBN1Q16643 649 aa8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 NIF3L1Q9GZT8 377 aa8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 PHF24Q9UPV7 400 aa8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 KCNH4Q9UQ05 1017 aa8.61□□□□□ -1.03
RNU4-27P-201ENST00000410889 CDC14CA4D256 554 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 GPR182O15218 404 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 FGD1P98174 961 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 PDE12Q6L8Q7 609 aaKnown RBP8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 GIPC2Q8TF65 315 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 TRERF1Q96PN7 1200 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 C11orf16Q9NQ32 467 aa8.6□□□□□ -1.03
RNU4-27P-201ENST00000410889 RBM47A0AV96 593 aaKnown RBP8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 XYLBO75191 536 aa8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 KCNQ4P56696 695 aa8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 ATP2B2Q01814 1243 aa8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 FMR1Q06787 632 aaKnown RBP eCLIP8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 CUEDC1Q9NWM3 386 aaPredicted RBP8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
RNU4-27P-201ENST00000410889 A6NHS1 94 aa8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 PPFIA3O75145 1194 aa8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 THBS1P07996 1170 aa8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 MAPTP10636 758 aaKnown RBP8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 TNP2Q05952 138 aa8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 GTPBP3Q969Y2 492 aaKnown RBP8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 ATXN7L1Q9ULK2 861 aaPredicted RBP8.58□□□□□ -1.04
RNU4-27P-201ENST00000410889 EFSO43281 561 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 BNIP3LO60238 219 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 RANGAP1P46060 587 aaPredicted RBP8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 SFSWAPQ12872 951 aaKnown RBP8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 DSC3Q14574 896 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 XKR5Q6UX68 686 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 SNX29Q8TEQ0 813 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
RNU4-27P-201ENST00000410889 EGFRP00533 1210 aa8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 IGHA2P01877 340 aa8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 CCINQ13939 588 aa8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 UBAP2LQ14157 1087 aaKnown RBP8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 FBXO33Q7Z6M2 555 aa8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 NLRP13Q86W25 1043 aa8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 ELP3Q9H9T3 547 aa8.56□□□□□ -1.04
RNU4-27P-201ENST00000410889 PNMA6FA0A0J9YX94 578 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 LCE2BO14633 110 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 ZNF16P17020 682 aaPredicted RBP8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 FGFR3P22607 806 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 GRNP28799 593 aaKnown RBP8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 NEUROD1Q13562 356 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 TTC39BQ5VTQ0 682 aaPredicted RBP8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 NDFIP2Q9NV92 336 aa8.55□□□□□ -1.04
RNU4-27P-201ENST00000410889 CPNE3O75131 537 aaKnown RBP8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 PHACTR2O75167 634 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 TNFRSF21O75509 655 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 ORC1Q13415 861 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 KRT25Q7Z3Z0 450 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 VWA5B2Q8N398 1253 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
RNU4-27P-201ENST00000410889 EFCC1Q9HA90 598 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms