RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
SLC3A1-202ENST00000409229 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 NR1I2O75469 434 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 AK2P54819 239 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 SLC12A5Q9H2X9 1139 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 USP8P40818 1118 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 SARM1Q6SZW1 724 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 CLSTN2Q9H4D0 955 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
SLC3A1-202ENST00000409229 PDE1AP54750 535 aa13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 GSDMDP57764 484 aa13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 IQCB1Q15051 598 aa13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 CNNM3Q8NE01 707 aa13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 KCNV1Q6PIU1 500 aa13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
SLC3A1-202ENST00000409229 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 CPA1P15085 419 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 SFPQP23246 707 aaKnown RBP eCLIP13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 PAX7P23759 505 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 KCND1Q9NSA2 647 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 ERCC6Q03468 1493 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 LARGE1O95461 756 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 SETQ01105 290 aaPredicted RBP13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 RUFY3Q7L099 469 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 MIEF2Q96C03 454 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 PRAM1Q96QH2 718 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 ZNF518AQ6AHZ1 1483 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 ANKRD44Q8N8A2 993 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
SLC3A1-202ENST00000409229 ABCC4O15439 1325 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 IL16Q14005 1332 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 FANCGO15287 622 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 NRDCO43847 1150 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 VAMP4O75379 141 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 PARP3Q9Y6F1 533 aa13.52□□□□□ -0.24
SLC3A1-202ENST00000409229 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.25
SLC3A1-202ENST00000409229 PBRM1Q86U86 1689 aa13.52□□□□□ -0.25
SLC3A1-202ENST00000409229 CHMLP26374 656 aa13.52□□□□□ -0.25
SLC3A1-202ENST00000409229 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.25
SLC3A1-202ENST00000409229 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
SLC3A1-202ENST00000409229 THUMPD2Q9BTF0 503 aaKnown RBP13.52□□□□□ -0.25
SLC3A1-202ENST00000409229 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 PSMD1Q99460 953 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 MYO5CQ9NQX4 1742 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 MPHOSPH10O00566 681 aaKnown RBP13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 N4BP2L2Q92802 583 aaPredicted RBP13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 FAXDC2Q96IV6 333 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 TTC41PQ6P2S7 1318 aa13.51□□□□□ -0.25
SLC3A1-202ENST00000409229 MAP2K7O14733 419 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 ELF1P32519 619 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 SCRN1Q12765 414 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 EXOC5O00471 708 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 AOPEPQ8N6M6 819 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 CROCC2H7BZ55 1655 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 SSR1P43307 286 aaKnown RBP13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 GNAI1P63096 354 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 TRIM65Q6PJ69 517 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 HDXQ7Z353 690 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 CTCFLQ8NI51 663 aaPredicted RBP13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 FAM204AQ9H8W3 233 aa13.5□□□□□ -0.25
SLC3A1-202ENST00000409229 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 CCDC151A5D8V7 595 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 TUBB4AP04350 444 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 CDC37L1Q7L3B6 337 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 NECAB1Q8N987 351 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 TBC1D22AQ8WUA7 517 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 CLIC6Q96NY7 704 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 IL25Q9H293 177 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 NPHP3Q7Z494 1330 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 PIK3R4Q99570 1358 aa13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 PPRC1Q5VV67 1664 aaKnown RBP13.49□□□□□ -0.25
SLC3A1-202ENST00000409229 KIF3CO14782 793 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms