RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 CCDC114Q96M63 670 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CCDC7Q96M83 1385 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 TSPOAP1O95153 1857 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 PTPRGP23470 1445 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 SRGAP3O43295 1099 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 FCHSD2O94868 740 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 ATP2A2P16615 1042 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 PDE6BP35913 854 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 PYM1Q9BRP8 204 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 CC2D2AQ9P2K1 1620 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 A0A1W2PRG0 241 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 SPECC1LQ69YQ0 1117 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 MIPOL1Q8TD10 442 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 GOLIM4O00461 696 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 C1orf228Q6PIY5 440 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 TRIM6Q9C030 488 aaPredicted RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 CCDC40Q4G0X9 1142 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CATIPQ7Z7H3 387 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 RIOK1Q9BRS2 568 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 EAPPQ56P03 285 aaPredicted RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 ACRBPQ8NEB7 543 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 ATP2C2O75185 946 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 PDE4BQ07343 736 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CCDC125Q86Z20 511 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CDAN1Q8IWY9 1227 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 RNF41Q9H4P4 317 aaPredicted RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 VEZTQ9HBM0 779 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CCDC194A0A1B0GVG4 234 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 LMCD1Q9NZU5 365 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CFAP157Q5JU67 520 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 TCERG1LQ5VWI1 586 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 DPH6Q7L8W6 267 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 SRGAP1Q7Z6B7 1085 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 NAPBQ9H115 298 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 TNNT1P13805 278 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 VPS52Q8N1B4 723 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CRACR2AQ9BSW2 395 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 CCER2I3L3R5 266 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 MTIF2P46199 727 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 SKIV2LQ15477 1246 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 PHLDB2Q86SQ0 1253 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 ZNF530Q6P9A1 599 aaPredicted RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 PARD3BQ8TEW8 1205 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 DKC1O60832 514 aaKnown RBP eCLIP3.87□□□□□ -1.79
NEB-204ENST00000409198 IDH1O75874 414 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 TRMT1LQ7Z2T5 733 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 NOP9Q86U38 636 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 ZGPATQ8N5A5 531 aaKnown RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 KAT14Q9H8E8 782 aa3.87□□□□□ -1.79
NEB-204ENST00000409198 ORC3Q9UBD5 711 aaPredicted RBP3.87□□□□□ -1.79
NEB-204ENST00000409198 RRP9O43818 475 aaKnown RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 SPECC1Q5M775 1068 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 FAM212AQ96EL1 285 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 KRT32Q14532 448 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 TCP11L1Q9NUJ3 509 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CALML3P27482 149 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CCDC83Q8IWF9 413 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 SMARCC2Q8TAQ2 1214 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 ZSCAN16Q9H4T2 348 aaPredicted RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 GNAI2P04899 355 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 APOBRQ0VD83 1088 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 ALDH3A1P30838 453 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 KIF11P52732 1056 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 HDGFL1Q5TGJ6 251 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 SLC7A5P2Q9GIP4 190 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 SLC8A2Q9UPR5 921 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 MAP9Q49MG5 647 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 PROCA1Q8NCQ7 364 aaPredicted RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 KCNH5Q8NCM2 988 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 VAT1LQ9HCJ6 419 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 PICK1Q9NRD5 415 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 STK10O94804 968 aaKnown RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 XPAP23025 273 aaPredicted RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 CEBPZQ03701 1054 aaKnown RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 SPAG5Q96R06 1193 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CCDC129Q6ZRS4 1044 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 PRPF38AQ8NAV1 312 aaKnown RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 ZFP91Q96JP5 570 aaPredicted RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 ZNF692Q9BU19 519 aaPredicted RBP3.86□□□□□ -1.79
NEB-204ENST00000409198 FAM204AQ9H8W3 233 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CDC45O75419 566 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 MBD3O95983 291 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CABP1Q9NZU7 370 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CYP46A1Q9Y6A2 500 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 KIF15Q9NS87 1388 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 RUNDC1Q96C34 613 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 EVI5LQ96CN4 794 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 NFE2L2Q16236 605 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 MGEA5O60502 916 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CALM1P0DP23 149 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CALM2P0DP24 149 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 CALM3P0DP25 149 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 JPH4Q96JJ6 628 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 PFDN6O15212 129 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 PPFIA3O75145 1194 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 MSL1Q68DK7 614 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 USP25Q9UHP3 1055 aa3.86□□□□□ -1.79
NEB-204ENST00000409198 SPDYE16A6NNV3 312 aaPredicted RBP3.85□□□□□ -1.79
NEB-204ENST00000409198 RANBP6O60518 1105 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms