RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 C3orf67Q6ZVT6 689 aa26.29■■□□□ 1.8
ITSN2-204ENST00000407704 SLC51AQ86UW1 340 aa26.29■■□□□ 1.8
ITSN2-204ENST00000407704 SYNE4Q8N205 404 aa26.29■■□□□ 1.8
ITSN2-204ENST00000407704 RPGRQ92834 1020 aaKnown RBP26.29■■□□□ 1.8
ITSN2-204ENST00000407704 ZNF541Q9H0D2 1346 aa26.29■■□□□ 1.8
ITSN2-204ENST00000407704 LAMB2P55268 1798 aa26.28■■□□□ 1.8
ITSN2-204ENST00000407704 IFFO2Q5TF58 517 aa26.28■■□□□ 1.8
ITSN2-204ENST00000407704 CHL1O00533 1208 aa26.27■■□□□ 1.8
ITSN2-204ENST00000407704 AIMP1Q12904 312 aaKnown RBP26.27■■□□□ 1.8
ITSN2-204ENST00000407704 COPS6Q7L5N1 327 aa26.27■■□□□ 1.8
ITSN2-204ENST00000407704 PPP1R42Q7Z4L9 355 aa26.27■■□□□ 1.8
ITSN2-204ENST00000407704 RIC1Q4ADV7 1423 aa26.27■■□□□ 1.8
ITSN2-204ENST00000407704 SNED1Q8TER0 1413 aa26.27■■□□□ 1.8
ITSN2-204ENST00000407704 TCERG1O14776 1098 aaKnown RBP26.26■■□□□ 1.79
ITSN2-204ENST00000407704 HOXA10P31260 410 aaPredicted RBP26.26■■□□□ 1.79
ITSN2-204ENST00000407704 IARSP41252 1262 aaKnown RBP26.26■■□□□ 1.79
ITSN2-204ENST00000407704 XAGE3Q8WTP9 111 aa26.26■■□□□ 1.79
ITSN2-204ENST00000407704 PARP10Q53GL7 1025 aa26.24■■□□□ 1.79
ITSN2-204ENST00000407704 CHADLQ6NUI6 762 aa26.24■■□□□ 1.79
ITSN2-204ENST00000407704 JMYQ8N9B5 988 aa26.24■■□□□ 1.79
ITSN2-204ENST00000407704 RBM17Q96I25 401 aaKnown RBP26.24■■□□□ 1.79
ITSN2-204ENST00000407704 UTP14AQ9BVJ6 771 aaKnown RBP26.24■■□□□ 1.79
ITSN2-204ENST00000407704 TAF1P21675 1872 aa26.23■■□□□ 1.79
ITSN2-204ENST00000407704 COL4A5P29400 1685 aa26.23■■□□□ 1.79
ITSN2-204ENST00000407704 L3MBTL3Q96JM7 780 aaPredicted RBP26.23■■□□□ 1.79
ITSN2-204ENST00000407704 PRKRIP1Q9H875 184 aaPredicted RBP26.23■■□□□ 1.79
ITSN2-204ENST00000407704 ZNF428Q96B54 188 aa26.22■■□□□ 1.79
ITSN2-204ENST00000407704 CRAMP1Q96RY5 1269 aa26.22■■□□□ 1.79
ITSN2-204ENST00000407704 PSMD1Q99460 953 aa26.22■■□□□ 1.79
ITSN2-204ENST00000407704 TAF1DQ9H5J8 278 aaPredicted RBP26.22■■□□□ 1.79
ITSN2-204ENST00000407704 IQCA1LA6NCM1 817 aa26.21■■□□□ 1.79
ITSN2-204ENST00000407704 FZD9O00144 591 aa26.21■■□□□ 1.79
ITSN2-204ENST00000407704 PPEF1O14829 653 aaPredicted RBP26.21■■□□□ 1.79
ITSN2-204ENST00000407704 NLRP3Q96P20 1036 aa26.21■■□□□ 1.79
ITSN2-204ENST00000407704 DDX21Q9NR30 783 aaKnown RBP eCLIP26.21■■□□□ 1.79
ITSN2-204ENST00000407704 CHPF2Q9P2E5 772 aa26.21■■□□□ 1.79
ITSN2-204ENST00000407704 CC2D2BQ6DHV5 1058 aa26.2■■□□□ 1.78
ITSN2-204ENST00000407704 SLC10A5Q5PT55 438 aa26.19■■□□□ 1.78
ITSN2-204ENST00000407704 NLRP10Q86W26 655 aa26.19■■□□□ 1.78
ITSN2-204ENST00000407704 TCIRG1Q13488 830 aa26.18■■□□□ 1.78
ITSN2-204ENST00000407704 EAPPQ56P03 285 aaPredicted RBP26.18■■□□□ 1.78
ITSN2-204ENST00000407704 RNF123Q5XPI4 1314 aa26.17■■□□□ 1.78
ITSN2-204ENST00000407704 HCLS1P14317 486 aaPredicted RBP26.17■■□□□ 1.78
ITSN2-204ENST00000407704 HSP90AB3PQ58FF7 597 aa26.17■■□□□ 1.78
ITSN2-204ENST00000407704 HDGFL1Q5TGJ6 251 aa26.17■■□□□ 1.78
ITSN2-204ENST00000407704 JDP2Q8WYK2 163 aa26.17■■□□□ 1.78
ITSN2-204ENST00000407704 LDHDQ86WU2 507 aa26.16■■□□□ 1.78
ITSN2-204ENST00000407704 HACL1Q9UJ83 578 aa26.16■■□□□ 1.78
ITSN2-204ENST00000407704 DDX60Q8IY21 1712 aaKnown RBP26.16■■□□□ 1.78
ITSN2-204ENST00000407704 ABCC4O15439 1325 aa26.15■■□□□ 1.78
ITSN2-204ENST00000407704 ADAMTSL1Q8N6G6 1762 aa26.15■■□□□ 1.78
ITSN2-204ENST00000407704 CFAP44Q96MT7 982 aa26.15■■□□□ 1.78
ITSN2-204ENST00000407704 MBIPQ9NS73 344 aa26.15■■□□□ 1.78
ITSN2-204ENST00000407704 TRMT112Q9UI30 125 aaKnown RBP26.15■■□□□ 1.78
ITSN2-204ENST00000407704 EPHX2P34913 555 aa26.14■■□□□ 1.78
ITSN2-204ENST00000407704 GPC2Q8N158 579 aa26.14■■□□□ 1.78
ITSN2-204ENST00000407704 LARGE2Q8N3Y3 721 aa26.14■■□□□ 1.78
ITSN2-204ENST00000407704 CLEC11AQ9Y240 323 aa26.14■■□□□ 1.78
ITSN2-204ENST00000407704 GJA3Q9Y6H8 435 aa26.14■■□□□ 1.78
ITSN2-204ENST00000407704 LTBP1Q14766 1721 aa26.14■■□□□ 1.77
ITSN2-204ENST00000407704 APAF1O14727 1248 aa26.13■■□□□ 1.77
ITSN2-204ENST00000407704 DUSP27Q5VZP5 1158 aa26.13■■□□□ 1.77
ITSN2-204ENST00000407704 ATP6V0A2Q9Y487 856 aa26.13■■□□□ 1.77
ITSN2-204ENST00000407704 PCNTO95613 3336 aa26.13■■□□□ 1.77
ITSN2-204ENST00000407704 EIF6P56537 245 aaKnown RBP26.12■■□□□ 1.77
ITSN2-204ENST00000407704 GRIPAP1Q4V328 841 aa26.12■■□□□ 1.77
ITSN2-204ENST00000407704 SH3TC1Q8TE82 1336 aa26.12■■□□□ 1.77
ITSN2-204ENST00000407704 HOXB7P09629 217 aa26.11■■□□□ 1.77
ITSN2-204ENST00000407704 ANKRD13DQ6ZTN6 518 aa26.11■■□□□ 1.77
ITSN2-204ENST00000407704 PLBD2Q8NHP8 589 aa26.11■■□□□ 1.77
ITSN2-204ENST00000407704 CREBZFQ9NS37 354 aa26.11■■□□□ 1.77
ITSN2-204ENST00000407704 DBF4Q9UBU7 674 aaPredicted RBP26.11■■□□□ 1.77
ITSN2-204ENST00000407704 PASKQ96RG2 1323 aa26.11■■□□□ 1.77
ITSN2-204ENST00000407704 AOC3Q16853 763 aa26.1■■□□□ 1.77
ITSN2-204ENST00000407704 TMX4Q9H1E5 349 aaPredicted RBP26.1■■□□□ 1.77
ITSN2-204ENST00000407704 MKRN1Q9UHC7 482 aaKnown RBP26.1■■□□□ 1.77
ITSN2-204ENST00000407704 ATP5J2-PTCD1G3V325 749 aa26.09■■□□□ 1.77
ITSN2-204ENST00000407704 PPIP5K2O43314 1243 aa26.09■■□□□ 1.77
ITSN2-204ENST00000407704 ITGBL1O95965 494 aaPredicted RBP26.09■■□□□ 1.77
ITSN2-204ENST00000407704 ZNF853P0CG23 659 aa26.09■■□□□ 1.77
ITSN2-204ENST00000407704 MAP1SQ66K74 1059 aaPredicted RBP26.08■■□□□ 1.77
ITSN2-204ENST00000407704 NIM1KQ8IY84 436 aa26.08■■□□□ 1.77
ITSN2-204ENST00000407704 ELL2O00472 640 aaPredicted RBP26.07■■□□□ 1.76
ITSN2-204ENST00000407704 BBOX1O75936 387 aa26.07■■□□□ 1.76
ITSN2-204ENST00000407704 COL13A1Q5TAT6 717 aaPredicted RBP26.07■■□□□ 1.76
ITSN2-204ENST00000407704 DDX46Q7L014 1031 aaKnown RBP26.07■■□□□ 1.76
ITSN2-204ENST00000407704 PNMA8AQ86V59 439 aaPredicted RBP26.07■■□□□ 1.76
ITSN2-204ENST00000407704 ISCA1Q9BUE6 129 aa26.07■■□□□ 1.76
ITSN2-204ENST00000407704 HYPKQ9NX55 129 aa26.07■■□□□ 1.76
ITSN2-204ENST00000407704 HSPA1AP0DMV8 641 aaKnown RBP26.06■■□□□ 1.76
ITSN2-204ENST00000407704 HSPA1BP0DMV9 641 aaKnown RBP26.06■■□□□ 1.76
ITSN2-204ENST00000407704 SP8Q8IXZ3 490 aa26.06■■□□□ 1.76
ITSN2-204ENST00000407704 FAM89AQ96GI7 184 aa26.06■■□□□ 1.76
ITSN2-204ENST00000407704 SCNN1DP51172 638 aa26.05■■□□□ 1.76
ITSN2-204ENST00000407704 GRAPQ13588 217 aa26.05■■□□□ 1.76
ITSN2-204ENST00000407704 CCDC184Q52MB2 194 aa26.05■■□□□ 1.76
ITSN2-204ENST00000407704 RTL5Q5HYW3 569 aaPredicted RBP26.05■■□□□ 1.76
ITSN2-204ENST00000407704 DPP8Q6V1X1 898 aaPredicted RBP26.05■■□□□ 1.76
ITSN2-204ENST00000407704 GRAPLQ8TC17 118 aaPredicted RBP26.05■■□□□ 1.76
ITSN2-204ENST00000407704 IFT57Q9NWB7 429 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms