RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 ZNF34Q8IZ26 560 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 PSMD1Q99460 953 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
PRAME-206ENST00000406503 LRRC37AA6NMS7 1700 aa17.05■□□□□ 0.32
PRAME-206ENST00000406503 RNF123Q5XPI4 1314 aa17.05■□□□□ 0.32
PRAME-206ENST00000406503 HOXA10P31260 410 aaPredicted RBP17.05■□□□□ 0.32
PRAME-206ENST00000406503 PDIA6Q15084 440 aa17.05■□□□□ 0.32
PRAME-206ENST00000406503 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
PRAME-206ENST00000406503 THSD7BQ9C0I4 1608 aa17.05■□□□□ 0.32
PRAME-206ENST00000406503 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
PRAME-206ENST00000406503 TNS4Q8IZW8 715 aa17.04■□□□□ 0.32
PRAME-206ENST00000406503 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
PRAME-206ENST00000406503 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
PRAME-206ENST00000406503 EPHX2P34913 555 aa17.03■□□□□ 0.32
PRAME-206ENST00000406503 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
PRAME-206ENST00000406503 GIGYF2Q6Y7W6 1299 aaKnown RBP17.03■□□□□ 0.32
PRAME-206ENST00000406503 HACL1Q9UJ83 578 aa17.03■□□□□ 0.32
PRAME-206ENST00000406503 COL4A1P02462 1669 aa17.02■□□□□ 0.32
PRAME-206ENST00000406503 NEFMP07197 916 aa17.02■□□□□ 0.32
PRAME-206ENST00000406503 EAPPQ56P03 285 aaPredicted RBP17.02■□□□□ 0.32
PRAME-206ENST00000406503 DUOX1Q9NRD9 1551 aa17.02■□□□□ 0.31
PRAME-206ENST00000406503 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
PRAME-206ENST00000406503 ANXA1P04083 346 aa17.01■□□□□ 0.31
PRAME-206ENST00000406503 GPC2Q8N158 579 aa17.01■□□□□ 0.31
PRAME-206ENST00000406503 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
PRAME-206ENST00000406503 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
PRAME-206ENST00000406503 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
PRAME-206ENST00000406503 PPEF1O14829 653 aaPredicted RBP16.99■□□□□ 0.31
PRAME-206ENST00000406503 FOXN1O15353 648 aa16.99■□□□□ 0.31
PRAME-206ENST00000406503 CAPN15O75808 1086 aa16.99■□□□□ 0.31
PRAME-206ENST00000406503 SCNN1DP51172 638 aa16.99■□□□□ 0.31
PRAME-206ENST00000406503 MAP1SQ66K74 1059 aaPredicted RBP16.99■□□□□ 0.31
PRAME-206ENST00000406503 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
PRAME-206ENST00000406503 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
PRAME-206ENST00000406503 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
PRAME-206ENST00000406503 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
PRAME-206ENST00000406503 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
PRAME-206ENST00000406503 VEGFBP49765 207 aa16.98■□□□□ 0.31
PRAME-206ENST00000406503 RIPK4P57078 832 aa16.98■□□□□ 0.31
PRAME-206ENST00000406503 ABCC4O15439 1325 aa16.97■□□□□ 0.31
PRAME-206ENST00000406503 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
PRAME-206ENST00000406503 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.314e-26■□□□□ 9.3
PRAME-206ENST00000406503 PARP10Q53GL7 1025 aa16.97■□□□□ 0.31
PRAME-206ENST00000406503 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
PRAME-206ENST00000406503 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
PRAME-206ENST00000406503 JDP2Q8WYK2 163 aa16.97■□□□□ 0.31
PRAME-206ENST00000406503 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
PRAME-206ENST00000406503 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
PRAME-206ENST00000406503 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
PRAME-206ENST00000406503 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
PRAME-206ENST00000406503 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.31
PRAME-206ENST00000406503 PNNQ9H307 717 aaKnown RBP16.96■□□□□ 0.31
PRAME-206ENST00000406503 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
PRAME-206ENST00000406503 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.31
PRAME-206ENST00000406503 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
PRAME-206ENST00000406503 EPS15P42566 896 aa16.95■□□□□ 0.3
PRAME-206ENST00000406503 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
PRAME-206ENST00000406503 LARGE2Q8N3Y3 721 aa16.95■□□□□ 0.3
PRAME-206ENST00000406503 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
PRAME-206ENST00000406503 ATP6V0A2Q9Y487 856 aa16.95■□□□□ 0.3
PRAME-206ENST00000406503 AOC3Q16853 763 aa16.94■□□□□ 0.3
PRAME-206ENST00000406503 GRIPAP1Q4V328 841 aa16.94■□□□□ 0.3
PRAME-206ENST00000406503 COPS6Q7L5N1 327 aa16.94■□□□□ 0.3
PRAME-206ENST00000406503 NLRP10Q86W26 655 aa16.94■□□□□ 0.3
PRAME-206ENST00000406503 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
PRAME-206ENST00000406503 UTP14AQ9BVJ6 771 aaKnown RBP16.94■□□□□ 0.3
PRAME-206ENST00000406503 SCN9AQ15858 1988 aa16.94■□□□□ 0.3
PRAME-206ENST00000406503 PSME4Q14997 1843 aa16.93■□□□□ 0.3
PRAME-206ENST00000406503 RALBP1Q15311 655 aa16.93■□□□□ 0.3
PRAME-206ENST00000406503 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
PRAME-206ENST00000406503 RTFDC1Q9BY42 306 aaPredicted RBP16.93■□□□□ 0.3
PRAME-206ENST00000406503 WBP1LQ9NX94 342 aa16.93■□□□□ 0.3
PRAME-206ENST00000406503 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
PRAME-206ENST00000406503 CHL1O00533 1208 aa16.92■□□□□ 0.3
PRAME-206ENST00000406503 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
PRAME-206ENST00000406503 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
PRAME-206ENST00000406503 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRAME-206ENST00000406503 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
PRAME-206ENST00000406503 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
PRAME-206ENST00000406503 NIM1KQ8IY84 436 aa16.91■□□□□ 0.3
PRAME-206ENST00000406503 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
PRAME-206ENST00000406503 LMOD1P29536 600 aaPredicted RBP16.9■□□□□ 0.3
PRAME-206ENST00000406503 CXCL9Q07325 125 aa16.9■□□□□ 0.3
PRAME-206ENST00000406503 TCIRG1Q13488 830 aa16.9■□□□□ 0.3
PRAME-206ENST00000406503 DEFB115Q30KQ5 88 aa16.9■□□□□ 0.3
PRAME-206ENST00000406503 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
PRAME-206ENST00000406503 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
PRAME-206ENST00000406503 TRAF5O00463 557 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 LMOD3Q0VAK6 560 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 NEUROD2Q15784 382 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 CST9Q5W186 159 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 USP50Q70EL3 339 aaPredicted RBP16.89■□□□□ 0.29
PRAME-206ENST00000406503 SP8Q8IXZ3 490 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 GPRC5DQ9NZD1 345 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 MYH3P11055 1940 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.29
PRAME-206ENST00000406503 ZNF646O15015 1829 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms