RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 MYL6BP14649 208 aa27.86■■■□□ 2.05
RHBDD3-202ENST00000406335 LBX1P52954 281 aa27.86■■■□□ 2.05
RHBDD3-202ENST00000406335 DLG5Q8TDM6 1919 aa27.86■■■□□ 2.05
RHBDD3-202ENST00000406335 ERVV-1B6SEH8 477 aa27.85■■■□□ 2.05
RHBDD3-202ENST00000406335 GPTP24298 496 aa27.85■■■□□ 2.05
RHBDD3-202ENST00000406335 LARGE2Q8N3Y3 721 aa27.85■■■□□ 2.05
RHBDD3-202ENST00000406335 RBM17Q96I25 401 aaKnown RBP27.84■■■□□ 2.05
RHBDD3-202ENST00000406335 WBP1LQ9NX94 342 aa27.84■■■□□ 2.05
RHBDD3-202ENST00000406335 MAP2K1Q02750 393 aaPredicted RBP27.83■■■□□ 2.05
RHBDD3-202ENST00000406335 ZBTB3Q9H5J0 574 aa27.83■■■□□ 2.05
RHBDD3-202ENST00000406335 MAP3K15Q6ZN16 1313 aa27.83■■■□□ 2.05
RHBDD3-202ENST00000406335 SCN4AP35499 1836 aa27.83■■■□□ 2.05
RHBDD3-202ENST00000406335 RASSF10A6NK89 507 aa27.82■■■□□ 2.04
RHBDD3-202ENST00000406335 GRM1Q13255 1194 aa27.82■■■□□ 2.04
RHBDD3-202ENST00000406335 CRY2Q49AN0 593 aa27.82■■■□□ 2.04
RHBDD3-202ENST00000406335 GRIPAP1Q4V328 841 aa27.82■■■□□ 2.04
RHBDD3-202ENST00000406335 WDR33Q9C0J8 1336 aaKnown RBP27.82■■■□□ 2.04
RHBDD3-202ENST00000406335 TTLL7Q6ZT98 887 aa27.81■■■□□ 2.04
RHBDD3-202ENST00000406335 ARFGEF2Q9Y6D5 1785 aa27.81■■■□□ 2.04
RHBDD3-202ENST00000406335 BEGAINQ9BUH8 593 aa27.8■■■□□ 2.04
RHBDD3-202ENST00000406335 DDX21Q9NR30 783 aaKnown RBP eCLIP27.8■■■□□ 2.04
RHBDD3-202ENST00000406335 ABCC12Q96J65 1359 aa27.79■■■□□ 2.04
RHBDD3-202ENST00000406335 PPEF1O14829 653 aaPredicted RBP27.79■■■□□ 2.04
RHBDD3-202ENST00000406335 SUSD4Q5VX71 490 aa27.79■■■□□ 2.04
RHBDD3-202ENST00000406335 NIM1KQ8IY84 436 aa27.79■■■□□ 2.04
RHBDD3-202ENST00000406335 PPP1R42Q7Z4L9 355 aa27.78■■■□□ 2.04
RHBDD3-202ENST00000406335 EPS15P42566 896 aa27.77■■■□□ 2.04
RHBDD3-202ENST00000406335 EIF4A1P60842 406 aaKnown RBP27.77■■■□□ 2.04
RHBDD3-202ENST00000406335 HOXA10P31260 410 aaPredicted RBP27.76■■■□□ 2.03
RHBDD3-202ENST00000406335 ECE1P42892 770 aa27.76■■■□□ 2.03
RHBDD3-202ENST00000406335 NLRP3Q96P20 1036 aa27.76■■■□□ 2.03
RHBDD3-202ENST00000406335 CRAMP1Q96RY5 1269 aa27.76■■■□□ 2.03
RHBDD3-202ENST00000406335 PPIP5K2O43314 1243 aa27.75■■■□□ 2.03
RHBDD3-202ENST00000406335 USP50Q70EL3 339 aaPredicted RBP27.75■■■□□ 2.03
RHBDD3-202ENST00000406335 HSPA8P11142 646 aaKnown RBP27.74■■■□□ 2.03
RHBDD3-202ENST00000406335 THUMPD2Q9BTF0 503 aaKnown RBP27.74■■■□□ 2.03
RHBDD3-202ENST00000406335 UBN2Q6ZU65 1347 aa27.73■■■□□ 2.03
RHBDD3-202ENST00000406335 SCNN1DP51172 638 aa27.73■■■□□ 2.03
RHBDD3-202ENST00000406335 PNNQ9H307 717 aaKnown RBP27.73■■■□□ 2.03
RHBDD3-202ENST00000406335 MAPK8IP3Q9UPT6 1336 aa27.72■■■□□ 2.03
RHBDD3-202ENST00000406335 FMR1Q06787 632 aaKnown RBP eCLIP27.72■■■□□ 2.03
RHBDD3-202ENST00000406335 RALBP1Q15311 655 aa27.72■■■□□ 2.03
RHBDD3-202ENST00000406335 ZNF34Q8IZ26 560 aa27.72■■■□□ 2.03
RHBDD3-202ENST00000406335 CAPNS2Q96L46 248 aa27.72■■■□□ 2.03
RHBDD3-202ENST00000406335 EIF2S2P20042 333 aaKnown RBP27.71■■■□□ 2.03
RHBDD3-202ENST00000406335 NFE2L2Q16236 605 aa27.71■■■□□ 2.03
RHBDD3-202ENST00000406335 AOC3Q16853 763 aa27.71■■■□□ 2.03
RHBDD3-202ENST00000406335 PARP10Q53GL7 1025 aa27.71■■■□□ 2.03
RHBDD3-202ENST00000406335 GIGYF2Q6Y7W6 1299 aaKnown RBP27.71■■■□□ 2.03
RHBDD3-202ENST00000406335 GPR101Q96P66 508 aaPredicted RBP27.71■■■□□ 2.03
RHBDD3-202ENST00000406335 CYP4F22Q6NT55 531 aa27.7■■■□□ 2.02
RHBDD3-202ENST00000406335 SUPT20HQ8NEM7 779 aa27.7■■■□□ 2.02
RHBDD3-202ENST00000406335 UTP14AQ9BVJ6 771 aaKnown RBP27.7■■■□□ 2.02
RHBDD3-202ENST00000406335 TRAF5O00463 557 aa27.69■■■□□ 2.02
RHBDD3-202ENST00000406335 NTSR2O95665 410 aa27.69■■■□□ 2.02
RHBDD3-202ENST00000406335 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-202ENST00000406335 ABHD8Q96I13 439 aa27.69■■■□□ 2.02
RHBDD3-202ENST00000406335 TSPYL4Q9UJ04 414 aa27.69■■■□□ 2.02
RHBDD3-202ENST00000406335 IBTKQ9P2D0 1353 aaPredicted RBP27.69■■■□□ 2.02
RHBDD3-202ENST00000406335 ADARB2Q9NS39 739 aaKnown RBP27.68■■■□□ 2.02
RHBDD3-202ENST00000406335 ATP6V0A2Q9Y487 856 aa27.68■■■□□ 2.02
RHBDD3-202ENST00000406335 C3orf67Q6ZVT6 689 aa27.67■■■□□ 2.02
RHBDD3-202ENST00000406335 DPP8Q6V1X1 898 aaPredicted RBP27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 SLC51AQ86UW1 340 aa27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 BCL2L13Q9BXK5 485 aa27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 VPS33BQ9H267 617 aa27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 ZNRF3Q9ULT6 936 aa27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 SNED1Q8TER0 1413 aa27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 ERBB4Q15303 1308 aa27.66■■■□□ 2.02
RHBDD3-202ENST00000406335 CST9Q5W186 159 aa27.65■■■□□ 2.02
RHBDD3-202ENST00000406335 PLEKHF1Q96S99 279 aa27.65■■■□□ 2.02
RHBDD3-202ENST00000406335 GPRC5DQ9NZD1 345 aa27.65■■■□□ 2.02
RHBDD3-202ENST00000406335 ADAMTSL1Q8N6G6 1762 aa27.65■■■□□ 2.02
RHBDD3-202ENST00000406335 CCDC85CA6NKD9 419 aa27.64■■■□□ 2.02
RHBDD3-202ENST00000406335 TLL2Q9Y6L7 1015 aa27.64■■■□□ 2.02
RHBDD3-202ENST00000406335 CELF2O95319 508 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 CXCL9Q07325 125 aa27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 AIMP1Q12904 312 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 MPNDQ8N594 471 aa27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 ZNF408Q9H9D4 720 aa27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 RIC1Q4ADV7 1423 aa27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 MYBBP1AQ9BQG0 1328 aaKnown RBP27.63■■■□□ 2.01
RHBDD3-202ENST00000406335 COL4A5P29400 1685 aa27.62■■■□□ 2.01
RHBDD3-202ENST00000406335 BBOX1O75936 387 aa27.62■■■□□ 2.01
RHBDD3-202ENST00000406335 GMPSP49915 693 aaPredicted RBP27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 TNIP1Q15025 636 aa27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 SLC10A5Q5PT55 438 aa27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 CIAPIN1Q6FI81 312 aa27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 DDX46Q7L014 1031 aaKnown RBP27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 NECTIN2Q92692 538 aa27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 ABCC4O15439 1325 aa27.61■■■□□ 2.01
RHBDD3-202ENST00000406335 AOC2O75106 756 aa27.6■■■□□ 2.01
RHBDD3-202ENST00000406335 ANXA1P04083 346 aa27.6■■■□□ 2.01
RHBDD3-202ENST00000406335 HSP90AB3PQ58FF7 597 aa27.6■■■□□ 2.01
RHBDD3-202ENST00000406335 SP8Q8IXZ3 490 aa27.6■■■□□ 2.01
RHBDD3-202ENST00000406335 TSKSQ9UJT2 592 aa27.6■■■□□ 2.01
RHBDD3-202ENST00000406335 LAMB4A4D0S4 1761 aa27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 RAD17O75943 681 aa27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 HCLS1P14317 486 aaPredicted RBP27.59■■■□□ 2.01
RHBDD3-202ENST00000406335 MAP2K2P36507 400 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms