RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IGHA2P01877 340 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 ZC3H6P61129 1189 aaKnown RBP7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 PSMD2Q13200 908 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 TRIM46Q7Z4K8 759 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 NIF3L1Q9GZT8 377 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 POLMQ9NP87 494 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 PARP2Q9UGN5 583 aa7.5□□□□□ -1.21
HMGB3P18-201ENST00000406327 PNMA6FA0A0J9YX94 578 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 SPINT1O43278 529 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 IGSF3O75054 1194 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 KCNMA1Q12791 1236 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 C4orf17Q53FE4 359 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 DUSP9Q99956 384 aaKnown RBP7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 DNAJC25Q9H1X3 360 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 NEUROD4Q9HD90 331 aa7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 FNDC3AQ9Y2H6 1198 aaKnown RBP7.49□□□□□ -1.21
HMGB3P18-201ENST00000406327 TXLNAP40222 546 aa7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 DAB2P98082 770 aa7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 GPR152Q8TDT2 470 aa7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 AIDAQ96BJ3 306 aa7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 NUDT16Q96DE0 195 aaKnown RBP7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 VTI1BQ9UEU0 232 aa7.48□□□□□ -1.21
HMGB3P18-201ENST00000406327 MICAL2O94851 1124 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 GNA15P30679 374 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 C8orf34Q49A92 452 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 CSRNP1Q96S65 589 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 INSM2Q96T92 566 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 BACH2Q9BYV9 841 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 METTL5Q9NRN9 209 aaKnown RBP7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 SPG7Q9UQ90 795 aa7.47□□□□□ -1.21
HMGB3P18-201ENST00000406327 EPB42P16452 691 aa7.46□□□□□ -1.22
HMGB3P18-201ENST00000406327 ARSDP51689 593 aa7.46□□□□□ -1.22
HMGB3P18-201ENST00000406327 FAM26DQ5JW98 314 aa7.46□□□□□ -1.22
HMGB3P18-201ENST00000406327 A0A1B0GTH6 734 aa7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 CPNE3O75131 537 aaKnown RBP7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 ERCC5P28715 1186 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 SF3A1Q15459 793 aaKnown RBP7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 TMEM87AQ8NBN3 555 aa7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 SUSD3Q96L08 255 aa7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 ZFP42Q96MM3 310 aa7.45□□□□□ -1.22
HMGB3P18-201ENST00000406327 BMP2P12643 396 aa7.44□□□□□ -1.22
HMGB3P18-201ENST00000406327 IDH3AP50213 366 aa7.44□□□□□ -1.22
HMGB3P18-201ENST00000406327 PDE12Q6L8Q7 609 aaKnown RBP7.44□□□□□ -1.22
HMGB3P18-201ENST00000406327 LYSMD3Q7Z3D4 306 aa7.44□□□□□ -1.22
HMGB3P18-201ENST00000406327 SNX29Q8TEQ0 813 aa7.44□□□□□ -1.22
HMGB3P18-201ENST00000406327 SREK1Q8WXA9 508 aaKnown RBP7.44□□□□□ -1.22
HMGB3P18-201ENST00000406327 EIF1AYO14602 144 aaKnown RBP7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 GIPC1O14908 333 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 VSIG8P0DPA2 414 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 SCARF1Q14162 830 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 CRELD1Q96HD1 420 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 BCS1LQ9Y276 419 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 GJA3Q9Y6H8 435 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 SHROOM4Q9ULL8 1493 aa7.43□□□□□ -1.22
HMGB3P18-201ENST00000406327 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 PHKA2P46019 1235 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 RNF34Q969K3 372 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 TIMMDC1Q9NPL8 285 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 C11orf16Q9NQ32 467 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 WWC3Q9ULE0 1092 aa7.42□□□□□ -1.22
HMGB3P18-201ENST00000406327 ATP4AP20648 1035 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 ZNF76P36508 570 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 GSK3AP49840 483 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 HDLBPQ00341 1268 aaKnown RBP7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 POU4F2Q12837 409 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 MRPL14Q6P1L8 145 aaKnown RBP7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 ZNF438Q7Z4V0 828 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 BTLAQ7Z6A9 289 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 GGNBP2Q9H3C7 697 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 NLRP2Q9NX02 1062 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 AK5Q9Y6K8 562 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 NISCHQ9Y2I1 1504 aa7.41□□□□□ -1.22
HMGB3P18-201ENST00000406327 TTLL8A6PVC2 850 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 OPLAHO14841 1288 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 INPP5BP32019 993 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 ORC1Q13415 861 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 NAALADL2Q58DX5 795 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 PRICKLE2Q7Z3G6 844 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 PGBD3Q8N328 593 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 TMEM151AQ8N4L1 468 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 HSH2DQ96JZ2 352 aa7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 RTCBQ9Y3I0 505 aaKnown RBP7.4□□□□□ -1.22
HMGB3P18-201ENST00000406327 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
HMGB3P18-201ENST00000406327 CMTR1Q8N1G2 835 aaKnown RBP7.39□□□□□ -1.23
HMGB3P18-201ENST00000406327 PMEPA1Q969W9 287 aa7.39□□□□□ -1.23
HMGB3P18-201ENST00000406327 ZIC5Q96T25 663 aa7.39□□□□□ -1.23
HMGB3P18-201ENST00000406327 SRCIN1Q9C0H9 1055 aa7.39□□□□□ -1.23
HMGB3P18-201ENST00000406327 PHACTR2O75167 634 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms