RNA–Protein interactions for RNA: ENST00000400940.3

RFKP1-201, Transcript of riboflavin kinase pseudogene 1, humanhuman

BASIC

Gene RFKP1, Length 428 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFKP1-201ENST00000400940 ALDH1B1P30837 517 aa10.96□□□□□ -0.65
RFKP1-201ENST00000400940 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
RFKP1-201ENST00000400940 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
RFKP1-201ENST00000400940 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
RFKP1-201ENST00000400940 PNISRQ8TF01 805 aaKnown RBP10.96□□□□□ -0.65
RFKP1-201ENST00000400940 RTF1Q92541 710 aaKnown RBP10.96□□□□□ -0.65
RFKP1-201ENST00000400940 USP16Q9Y5T5 823 aa10.96□□□□□ -0.65
RFKP1-201ENST00000400940 FZD9O00144 591 aa10.95□□□□□ -0.66
RFKP1-201ENST00000400940 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
RFKP1-201ENST00000400940 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
RFKP1-201ENST00000400940 PPP2R1AP30153 589 aa10.95□□□□□ -0.66
RFKP1-201ENST00000400940 HOXA10P31260 410 aaPredicted RBP10.95□□□□□ -0.66
RFKP1-201ENST00000400940 TAF7Q15545 349 aaPredicted RBP10.95□□□□□ -0.66
RFKP1-201ENST00000400940 DCBLD2Q96PD2 775 aa10.95□□□□□ -0.66
RFKP1-201ENST00000400940 NYXQ9GZU5 481 aa10.95□□□□□ -0.66
RFKP1-201ENST00000400940 TAF1DQ9H5J8 278 aaPredicted RBP10.95□□□□□ -0.66
RFKP1-201ENST00000400940 PSME4Q14997 1843 aa10.95□□□□□ -0.66
RFKP1-201ENST00000400940 COL4A5P29400 1685 aa10.95□□□□□ -0.66
RFKP1-201ENST00000400940 KCNQ3O43525 872 aa10.94□□□□□ -0.66
RFKP1-201ENST00000400940 PNMA8AQ86V59 439 aaPredicted RBP10.94□□□□□ -0.66
RFKP1-201ENST00000400940 GPC2Q8N158 579 aa10.94□□□□□ -0.66
RFKP1-201ENST00000400940 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
RFKP1-201ENST00000400940 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 MAP3K15Q6ZN16 1313 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 RASSF10A6NK89 507 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 DDNO94850 711 aaPredicted RBP10.93□□□□□ -0.66
RFKP1-201ENST00000400940 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
RFKP1-201ENST00000400940 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
RFKP1-201ENST00000400940 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
RFKP1-201ENST00000400940 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 VPS33BQ9H267 617 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 BABAM1Q9NWV8 329 aa10.93□□□□□ -0.66
RFKP1-201ENST00000400940 NIP7Q9Y221 180 aaKnown RBP eCLIP10.93□□□□□ -0.66
RFKP1-201ENST00000400940 NPHP1O15259 732 aa10.92□□□□□ -0.66
RFKP1-201ENST00000400940 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
RFKP1-201ENST00000400940 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
RFKP1-201ENST00000400940 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
RFKP1-201ENST00000400940 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
RFKP1-201ENST00000400940 PDE4DIPQ5VU43 2346 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 ZNF541Q9H0D2 1346 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 PRAMEF22A3QJZ6 481 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 MCM10Q7L590 875 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 CRAMP1Q96RY5 1269 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 PLEKHF1Q96S99 279 aa10.91□□□□□ -0.66
RFKP1-201ENST00000400940 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.66
RFKP1-201ENST00000400940 TAF1P21675 1872 aa10.9□□□□□ -0.66
RFKP1-201ENST00000400940 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
RFKP1-201ENST00000400940 EPHX2P34913 555 aa10.9□□□□□ -0.66
RFKP1-201ENST00000400940 EIF4A1P60842 406 aaKnown RBP10.9□□□□□ -0.66
RFKP1-201ENST00000400940 PARP10Q53GL7 1025 aa10.9□□□□□ -0.66
RFKP1-201ENST00000400940 LRP10Q7Z4F1 713 aa10.9□□□□□ -0.66
RFKP1-201ENST00000400940 PNNQ9H307 717 aaKnown RBP10.9□□□□□ -0.66
RFKP1-201ENST00000400940 UBN2Q6ZU65 1347 aa10.89□□□□□ -0.67
RFKP1-201ENST00000400940 NEFMP07197 916 aa10.89□□□□□ -0.67
RFKP1-201ENST00000400940 ZNF34Q8IZ26 560 aa10.89□□□□□ -0.67
RFKP1-201ENST00000400940 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
RFKP1-201ENST00000400940 ZNF609O15014 1411 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 NTSR2O95665 410 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 NFE2L2Q16236 605 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 HLFQ16534 295 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 SLC10A5Q5PT55 438 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
RFKP1-201ENST00000400940 KIF6Q6ZMV9 814 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 JDP2Q8WYK2 163 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
RFKP1-201ENST00000400940 ZNF277Q9NRM2 450 aaPredicted RBP10.88□□□□□ -0.67
RFKP1-201ENST00000400940 WBP1LQ9NX94 342 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 MYH3P11055 1940 aa10.88□□□□□ -0.67
RFKP1-201ENST00000400940 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
RFKP1-201ENST00000400940 CTCFP49711 727 aaPredicted RBP10.87□□□□□ -0.67
RFKP1-201ENST00000400940 HHIPL1Q96JK4 782 aa10.87□□□□□ -0.67
RFKP1-201ENST00000400940 PIP4K2AP48426 406 aaPredicted RBP10.86□□□□□ -0.67
RFKP1-201ENST00000400940 SCNN1DP51172 638 aa10.86□□□□□ -0.67
RFKP1-201ENST00000400940 DCTN1Q14203 1278 aa10.86□□□□□ -0.67
RFKP1-201ENST00000400940 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
RFKP1-201ENST00000400940 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
RFKP1-201ENST00000400940 SYNE4Q8N205 404 aa10.86□□□□□ -0.67
RFKP1-201ENST00000400940 POLR2AP24928 1970 aaKnown RBP10.86□□□□□ -0.67
RFKP1-201ENST00000400940 LAMB1P07942 1786 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 FOXN1O15353 648 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 VEGFBP49765 207 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 EIF6P56537 245 aaKnown RBP10.85□□□□□ -0.67
RFKP1-201ENST00000400940 MAP2K1Q02750 393 aaPredicted RBP10.85□□□□□ -0.67
RFKP1-201ENST00000400940 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 PPP1R42Q7Z4L9 355 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 CNTROBQ8N137 903 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 RPGRQ92834 1020 aaKnown RBP10.85□□□□□ -0.67
RFKP1-201ENST00000400940 MKRN1Q9UHC7 482 aaKnown RBP10.85□□□□□ -0.67
RFKP1-201ENST00000400940 ATP6V0A2Q9Y487 856 aa10.85□□□□□ -0.67
RFKP1-201ENST00000400940 ZNF646O15015 1829 aaPredicted RBP10.84□□□□□ -0.67
RFKP1-201ENST00000400940 AKAP11Q9UKA4 1901 aa10.84□□□□□ -0.67
RFKP1-201ENST00000400940 HOXB7P09629 217 aa10.84□□□□□ -0.67
RFKP1-201ENST00000400940 GTF2E1P29083 439 aaPredicted RBP10.84□□□□□ -0.67
RFKP1-201ENST00000400940 LMOD1P29536 600 aaPredicted RBP10.84□□□□□ -0.67
RFKP1-201ENST00000400940 LMOD3Q0VAK6 560 aa10.84□□□□□ -0.67
RFKP1-201ENST00000400940 TTLL7Q6ZT98 887 aa10.84□□□□□ -0.67
RFKP1-201ENST00000400940 SUPT20HQ8NEM7 779 aa10.84□□□□□ -0.67
RFKP1-201ENST00000400940 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms