RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 NFE2L2Q16236 605 aa15.8■□□□□ 0.12
LINC00544-201ENST00000400540 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
LINC00544-201ENST00000400540 NYXQ9GZU5 481 aa15.8■□□□□ 0.12
LINC00544-201ENST00000400540 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
LINC00544-201ENST00000400540 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
LINC00544-201ENST00000400540 FOXN1O15353 648 aa15.79■□□□□ 0.12
LINC00544-201ENST00000400540 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
LINC00544-201ENST00000400540 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
LINC00544-201ENST00000400540 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
LINC00544-201ENST00000400540 PNISRQ8TF01 805 aaKnown RBP15.79■□□□□ 0.12
LINC00544-201ENST00000400540 PSMD1Q99460 953 aa15.79■□□□□ 0.12
LINC00544-201ENST00000400540 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
LINC00544-201ENST00000400540 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
LINC00544-201ENST00000400540 NEFMP07197 916 aa15.78■□□□□ 0.12
LINC00544-201ENST00000400540 VEGFBP49765 207 aa15.78■□□□□ 0.12
LINC00544-201ENST00000400540 RPGRQ92834 1020 aaKnown RBP15.78■□□□□ 0.12
LINC00544-201ENST00000400540 DDX60Q8IY21 1712 aaKnown RBP15.77■□□□□ 0.12
LINC00544-201ENST00000400540 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
LINC00544-201ENST00000400540 NTSR2O95665 410 aa15.77■□□□□ 0.12
LINC00544-201ENST00000400540 ZNF34Q8IZ26 560 aa15.77■□□□□ 0.12
LINC00544-201ENST00000400540 GPC2Q8N158 579 aa15.77■□□□□ 0.12
LINC00544-201ENST00000400540 GJA3Q9Y6H8 435 aa15.77■□□□□ 0.12
LINC00544-201ENST00000400540 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
LINC00544-201ENST00000400540 JDP2Q8WYK2 163 aa15.76■□□□□ 0.11
LINC00544-201ENST00000400540 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
LINC00544-201ENST00000400540 PPEF1O14829 653 aaPredicted RBP15.75■□□□□ 0.11
LINC00544-201ENST00000400540 ANXA1P04083 346 aa15.75■□□□□ 0.11
LINC00544-201ENST00000400540 GIGYF2Q6Y7W6 1299 aaKnown RBP15.75■□□□□ 0.11
LINC00544-201ENST00000400540 LRP10Q7Z4F1 713 aa15.75■□□□□ 0.11
LINC00544-201ENST00000400540 PNMA8AQ86V59 439 aaPredicted RBP15.75■□□□□ 0.11
LINC00544-201ENST00000400540 CNTROBQ8N137 903 aa15.75■□□□□ 0.11
LINC00544-201ENST00000400540 SCNN1DP51172 638 aa15.74■□□□□ 0.11
LINC00544-201ENST00000400540 EIF6P56537 245 aaKnown RBP15.74■□□□□ 0.11
LINC00544-201ENST00000400540 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC00544-201ENST00000400540 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
LINC00544-201ENST00000400540 TSPYL4Q9UJ04 414 aa15.74■□□□□ 0.11
LINC00544-201ENST00000400540 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
LINC00544-201ENST00000400540 ERBB4Q15303 1308 aa15.73■□□□□ 0.11
LINC00544-201ENST00000400540 EPS15P42566 896 aa15.73■□□□□ 0.11
LINC00544-201ENST00000400540 PDIA6Q15084 440 aa15.73■□□□□ 0.11
LINC00544-201ENST00000400540 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
LINC00544-201ENST00000400540 LARGE2Q8N3Y3 721 aa15.73■□□□□ 0.11
LINC00544-201ENST00000400540 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
LINC00544-201ENST00000400540 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
LINC00544-201ENST00000400540 RASSF10A6NK89 507 aa15.72■□□□□ 0.11
LINC00544-201ENST00000400540 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
LINC00544-201ENST00000400540 ABCC4O15439 1325 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 COL4A1P02462 1669 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 LMOD1P29536 600 aaPredicted RBP15.71■□□□□ 0.11
LINC00544-201ENST00000400540 AOC3Q16853 763 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 DEFB115Q30KQ5 88 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 PPP1R42Q7Z4L9 355 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 AIDAQ96BJ3 306 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC00544-201ENST00000400540 WBP1LQ9NX94 342 aa15.71■□□□□ 0.11
LINC00544-201ENST00000400540 ABT1Q9ULW3 272 aaKnown RBP15.71■□□□□ 0.11
LINC00544-201ENST00000400540 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
LINC00544-201ENST00000400540 CTCFP49711 727 aaPredicted RBP15.7■□□□□ 0.1
LINC00544-201ENST00000400540 RIPK4P57078 832 aa15.7■□□□□ 0.1
LINC00544-201ENST00000400540 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
LINC00544-201ENST00000400540 NECTIN2Q92692 538 aa15.7■□□□□ 0.1
LINC00544-201ENST00000400540 PRDM10Q9NQV6 1147 aa15.7■□□□□ 0.1
LINC00544-201ENST00000400540 WDR33Q9C0J8 1336 aaKnown RBP15.69■□□□□ 0.1
LINC00544-201ENST00000400540 LBX1P52954 281 aa15.69■□□□□ 0.1
LINC00544-201ENST00000400540 NIM1KQ8IY84 436 aa15.69■□□□□ 0.1
LINC00544-201ENST00000400540 ZNF428Q96B54 188 aa15.69■□□□□ 0.1
LINC00544-201ENST00000400540 NLRP3Q96P20 1036 aa15.69■□□□□ 0.1
LINC00544-201ENST00000400540 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
LINC00544-201ENST00000400540 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
LINC00544-201ENST00000400540 TRAF5O00463 557 aa15.68■□□□□ 0.1
LINC00544-201ENST00000400540 GRIPAP1Q4V328 841 aa15.68■□□□□ 0.1
LINC00544-201ENST00000400540 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
LINC00544-201ENST00000400540 HSPA8P11142 646 aaKnown RBP15.67■□□□□ 0.1
LINC00544-201ENST00000400540 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
LINC00544-201ENST00000400540 AIMP1Q12904 312 aaKnown RBP15.67■□□□□ 0.1
LINC00544-201ENST00000400540 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
LINC00544-201ENST00000400540 SLC10A5Q5PT55 438 aa15.67■□□□□ 0.1
LINC00544-201ENST00000400540 COPS6Q7L5N1 327 aa15.67■□□□□ 0.1
LINC00544-201ENST00000400540 XAGE3Q8WTP9 111 aa15.67■□□□□ 0.1
LINC00544-201ENST00000400540 POLR2AP24928 1970 aaKnown RBP15.67■□□□□ 0.1
LINC00544-201ENST00000400540 TMPOP42166 694 aaKnown RBP15.66■□□□□ 0.1
LINC00544-201ENST00000400540 CXCL9Q07325 125 aa15.66■□□□□ 0.1
LINC00544-201ENST00000400540 CST9Q5W186 159 aa15.66■□□□□ 0.1
LINC00544-201ENST00000400540 USP50Q70EL3 339 aaPredicted RBP15.66■□□□□ 0.1
LINC00544-201ENST00000400540 NLRP10Q86W26 655 aa15.66■□□□□ 0.1
LINC00544-201ENST00000400540 GPRC5DQ9NZD1 345 aa15.66■□□□□ 0.1
LINC00544-201ENST00000400540 GRM1Q13255 1194 aa15.65■□□□□ 0.1
LINC00544-201ENST00000400540 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
LINC00544-201ENST00000400540 PAXIP1Q6ZW49 1069 aaPredicted RBP15.65■□□□□ 0.1
LINC00544-201ENST00000400540 CCDC146Q8IYE0 955 aa15.65■□□□□ 0.1
LINC00544-201ENST00000400540 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
LINC00544-201ENST00000400540 GMPSP49915 693 aaPredicted RBP15.64■□□□□ 0.09
LINC00544-201ENST00000400540 NEUROD2Q15784 382 aa15.64■□□□□ 0.09
LINC00544-201ENST00000400540 DPP8Q6V1X1 898 aaPredicted RBP15.64■□□□□ 0.09
LINC00544-201ENST00000400540 CAPNS2Q96L46 248 aa15.64■□□□□ 0.09
LINC00544-201ENST00000400540 ADARB2Q9NS39 739 aaKnown RBP15.64■□□□□ 0.09
LINC00544-201ENST00000400540 ZNRF3Q9ULT6 936 aa15.64■□□□□ 0.09
LINC00544-201ENST00000400540 SP8Q8IXZ3 490 aa15.63■□□□□ 0.09
LINC00544-201ENST00000400540 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms