RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 PPFIA4O75335 1185 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 USP8P40818 1118 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 LIG3P49916 1009 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 INHBEP58166 350 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 SARNPP82979 210 aaKnown RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 FBXW10Q5XX13 1052 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 TTC19Q6DKK2 380 aaPredicted RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 GBP6Q6ZN66 633 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 CLSTN2Q9H4D0 955 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 FAN1Q9Y2M0 1017 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 NSD3Q9BZ95 1437 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 DNMBPQ6XZF7 1577 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 KLHL33A6NCF5 533 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 N4BP1O75113 896 aaKnown RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 GSDMDP57764 484 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 NAIF1Q69YI7 327 aaPredicted RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 GNL3LQ9NVN8 582 aaKnown RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 FANCGO15287 622 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 NEBLO76041 1014 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 MCM6Q14566 821 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 ERC1Q8IUD2 1116 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 PLEKHF1Q96S99 279 aa10.16□□□□□ -0.78
RETREG1-202ENST00000399793 DDX19AQ9NUU7 478 aaKnown RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.16□□□□□ -0.78
RETREG1-202ENST00000399793 MSH6P52701 1360 aa10.15□□□□□ -0.78
RETREG1-202ENST00000399793 VPS37CA5D8V6 355 aaPredicted RBP10.15□□□□□ -0.78
RETREG1-202ENST00000399793 CPLX2Q6PUV4 134 aaKnown RBP10.15□□□□□ -0.78
RETREG1-202ENST00000399793 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
RETREG1-202ENST00000399793 SLC24A3Q9HC58 644 aa10.15□□□□□ -0.78
RETREG1-202ENST00000399793 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.78
RETREG1-202ENST00000399793 SGSM2O43147 1006 aa10.15□□□□□ -0.79
RETREG1-202ENST00000399793 GJB2P29033 226 aa10.15□□□□□ -0.79
RETREG1-202ENST00000399793 KRT85P78386 507 aa10.15□□□□□ -0.79
RETREG1-202ENST00000399793 SKIDA1Q1XH10 827 aa10.15□□□□□ -0.79
RETREG1-202ENST00000399793 C11orf57Q6ZUT1 292 aaPredicted RBP10.15□□□□□ -0.79
RETREG1-202ENST00000399793 BICC1Q9H694 974 aaKnown RBP10.15□□□□□ -0.79
RETREG1-202ENST00000399793 TDRD9Q8NDG6 1382 aaKnown RBP10.15□□□□□ -0.79
RETREG1-202ENST00000399793 GOLGA6L4A6NEF3 574 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 CAVIN2O95810 425 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 GNAI1P63096 354 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 TRIM65Q6PJ69 517 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 NBPF11Q86T75 865 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 ANKRD44Q8N8A2 993 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 CNNM3Q8NE01 707 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 BORCS6Q96GS4 357 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 OSBPL5Q9H0X9 879 aaPredicted RBP10.14□□□□□ -0.79
RETREG1-202ENST00000399793 PAX7P23759 505 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 SSR1P43307 286 aaKnown RBP10.14□□□□□ -0.79
RETREG1-202ENST00000399793 PDE1AP54750 535 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 NBPF9Q3BBW0 867 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 FAM173BQ6P4H8 233 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 STAG1Q8WVM7 1258 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 TACO1Q9BSH4 297 aaKnown RBP10.14□□□□□ -0.79
RETREG1-202ENST00000399793 TOPBP1Q92547 1522 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 ARHGEF5Q12774 1597 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 TTC37Q6PGP7 1564 aa10.14□□□□□ -0.79
RETREG1-202ENST00000399793 VAMP4O75379 141 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 NR1I2O75469 434 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 ELF1P32519 619 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 AK2P54819 239 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 RUFY3Q7L099 469 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 RSRC2Q7L4I2 434 aaKnown RBP10.13□□□□□ -0.79
RETREG1-202ENST00000399793 FAM107BQ9H098 131 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 LIMCH1Q9UPQ0 1083 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 FAM135BQ49AJ0 1406 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 YTHDC2Q9H6S0 1430 aaKnown RBP10.13□□□□□ -0.79
RETREG1-202ENST00000399793 CCDC151A5D8V7 595 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 BECN2A8MW95 431 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 EXOC5O00471 708 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 SCRN1Q12765 414 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 ARMCX5Q6P1M9 558 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 PDS5BQ9NTI5 1447 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 IFIT2P09913 472 aaKnown RBP10.13□□□□□ -0.79
RETREG1-202ENST00000399793 IQGAP2Q13576 1575 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 VPS53Q5VIR6 699 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 TSHZ3Q63HK5 1081 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 ISM2Q6H9L7 571 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 RABGGTAQ92696 567 aa10.13□□□□□ -0.79
RETREG1-202ENST00000399793 A1CFQ9NQ94 594 aaKnown RBP10.13□□□□□ -0.79
RETREG1-202ENST00000399793 CHMLP26374 656 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 KCNJ6P48051 423 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 FERMT3Q86UX7 667 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 OSBPL3Q9H4L5 887 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
RETREG1-202ENST00000399793 PHACTR2O75167 634 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 LARGE1O95461 756 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 SETQ01105 290 aaPredicted RBP10.12□□□□□ -0.79
RETREG1-202ENST00000399793 NEDD9Q14511 834 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 BRD3Q15059 726 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 ZKSCAN8Q15776 578 aaPredicted RBP10.12□□□□□ -0.79
RETREG1-202ENST00000399793 JAKMIP3Q5VZ66 844 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 HDXQ7Z353 690 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 CCDC83Q8IWF9 413 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 TSPYL6Q8N831 410 aa10.12□□□□□ -0.79
RETREG1-202ENST00000399793 TTC14Q96N46 770 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms