RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
SBF1-203ENST00000399627 DNAAF4Q8WXU2 420 aa23.16■■□□□ 1.3
SBF1-203ENST00000399627 BRCA1P38398 1863 aaKnown RBP23.15■■□□□ 1.3
SBF1-203ENST00000399627 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
SBF1-203ENST00000399627 F6X3S4 739 aa23.15■■□□□ 1.3
SBF1-203ENST00000399627 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
SBF1-203ENST00000399627 COL11A2P13942 1736 aaPredicted RBP23.14■■□□□ 1.3
SBF1-203ENST00000399627 PDE6BP35913 854 aa23.14■■□□□ 1.29
SBF1-203ENST00000399627 NEXNQ0ZGT2 675 aa23.14■■□□□ 1.29
SBF1-203ENST00000399627 C2CD5Q86YS7 1000 aa23.14■■□□□ 1.29
SBF1-203ENST00000399627 DLEC1Q9Y238 1755 aa23.14■■□□□ 1.29
SBF1-203ENST00000399627 TNRC6CQ9HCJ0 1690 aaKnown RBP23.13■■□□□ 1.29
SBF1-203ENST00000399627 IGKV5-2P06315 115 aa23.13■■□□□ 1.29
SBF1-203ENST00000399627 KCNA3P22001 575 aa23.13■■□□□ 1.29
SBF1-203ENST00000399627 SYNE4Q8N205 404 aa23.13■■□□□ 1.29
SBF1-203ENST00000399627 CCDC191Q8NCU4 936 aa23.13■■□□□ 1.29
SBF1-203ENST00000399627 WWC3Q9ULE0 1092 aa23.13■■□□□ 1.29
SBF1-203ENST00000399627 RNF123Q5XPI4 1314 aa23.12■■□□□ 1.29
SBF1-203ENST00000399627 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
SBF1-203ENST00000399627 PTPRCP08575 1304 aa23.11■■□□□ 1.29
SBF1-203ENST00000399627 SH3TC1Q8TE82 1336 aa23.11■■□□□ 1.29
SBF1-203ENST00000399627 H0YIN7 160 aa23.11■■□□□ 1.29
SBF1-203ENST00000399627 BRPF1P55201 1214 aaPredicted RBP23.11■■□□□ 1.29
SBF1-203ENST00000399627 CWF19L2Q2TBE0 894 aaKnown RBP23.11■■□□□ 1.29
SBF1-203ENST00000399627 NEURL1BA8MQ27 555 aa23.1■■□□□ 1.29
SBF1-203ENST00000399627 SLC10A5Q5PT55 438 aa23.1■■□□□ 1.29
SBF1-203ENST00000399627 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
SBF1-203ENST00000399627 FAM89AQ96GI7 184 aa23.1■■□□□ 1.29
SBF1-203ENST00000399627 PDZRN3Q9UPQ7 1066 aa23.1■■□□□ 1.29
SBF1-203ENST00000399627 LAMB2P55268 1798 aa23.09■■□□□ 1.29
SBF1-203ENST00000399627 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
SBF1-203ENST00000399627 DDX60Q8IY21 1712 aaKnown RBP23.09■■□□□ 1.29
SBF1-203ENST00000399627 BCAR3O75815 825 aa23.09■■□□□ 1.29
SBF1-203ENST00000399627 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
SBF1-203ENST00000399627 LINS1Q8NG48 757 aa23.09■■□□□ 1.29
SBF1-203ENST00000399627 NOB1Q9ULX3 412 aaKnown RBP23.09■■□□□ 1.29
SBF1-203ENST00000399627 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
SBF1-203ENST00000399627 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
SBF1-203ENST00000399627 HCLS1P14317 486 aaPredicted RBP23.08■■□□□ 1.29
SBF1-203ENST00000399627 GPR162Q16538 588 aa23.08■■□□□ 1.29
SBF1-203ENST00000399627 BEND3Q5T5X7 828 aa23.08■■□□□ 1.29
SBF1-203ENST00000399627 SLC4A10Q6U841 1118 aa23.08■■□□□ 1.29
SBF1-203ENST00000399627 JARID2Q92833 1246 aaPredicted RBP23.08■■□□□ 1.29
SBF1-203ENST00000399627 PIM2Q9P1W9 311 aa23.08■■□□□ 1.29
SBF1-203ENST00000399627 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
SBF1-203ENST00000399627 SRGNP10124 158 aa23.07■■□□□ 1.28
SBF1-203ENST00000399627 C3orf67Q6ZVT6 689 aa23.07■■□□□ 1.28
SBF1-203ENST00000399627 ZBTB38Q8NAP3 1195 aaPredicted RBP23.07■■□□□ 1.28
SBF1-203ENST00000399627 ZNF622Q969S3 477 aaKnown RBP eCLIP23.07■■□□□ 1.28
SBF1-203ENST00000399627 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
SBF1-203ENST00000399627 DCAF8L1A6NGE4 600 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 GCKRQ14397 625 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 MASTLQ96GX5 879 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 NLRP3Q96P20 1036 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 BCS1LQ9Y276 419 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 ARFGEF1Q9Y6D6 1849 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 KIF16BQ96L93 1317 aa23.05■■□□□ 1.28
SBF1-203ENST00000399627 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
SBF1-203ENST00000399627 NPR1P16066 1061 aa23.04■■□□□ 1.28
SBF1-203ENST00000399627 CRY2Q49AN0 593 aa23.04■■□□□ 1.28
SBF1-203ENST00000399627 DALRD3Q5D0E6 543 aaKnown RBP23.04■■□□□ 1.28
SBF1-203ENST00000399627 STYK1Q6J9G0 422 aa23.04■■□□□ 1.28
SBF1-203ENST00000399627 SLX4Q8IY92 1834 aa23.03■■□□□ 1.28
SBF1-203ENST00000399627 TTLL6Q8N841 843 aa23.03■■□□□ 1.28
SBF1-203ENST00000399627 API5Q9BZZ5 524 aaKnown RBP23.03■■□□□ 1.28
SBF1-203ENST00000399627 SRCIN1Q9C0H9 1055 aa23.03■■□□□ 1.28
SBF1-203ENST00000399627 H7C1W4 665 aa23.02■■□□□ 1.28
SBF1-203ENST00000399627 ALDH1L1O75891 902 aa23.02■■□□□ 1.28
SBF1-203ENST00000399627 UBE3BQ7Z3V4 1068 aa23.02■■□□□ 1.28
SBF1-203ENST00000399627 FRAT1Q92837 279 aaPredicted RBP23.02■■□□□ 1.28
SBF1-203ENST00000399627 CDHR2Q9BYE9 1310 aa23.02■■□□□ 1.28
SBF1-203ENST00000399627 MYH3P11055 1940 aa23.02■■□□□ 1.28
SBF1-203ENST00000399627 ARHGAP45Q92619 1136 aa23.01■■□□□ 1.27
SBF1-203ENST00000399627 RPGRQ92834 1020 aaKnown RBP23.01■■□□□ 1.27
SBF1-203ENST00000399627 CNKSR1Q969H4 720 aa23.01■■□□□ 1.27
SBF1-203ENST00000399627 TAF1P21675 1872 aa23■■□□□ 1.27
SBF1-203ENST00000399627 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
SBF1-203ENST00000399627 HOXA10P31260 410 aaPredicted RBP22.99■■□□□ 1.27
SBF1-203ENST00000399627 CASP7P55210 303 aa22.99■■□□□ 1.27
SBF1-203ENST00000399627 GRIN3BO60391 1043 aa22.98■■□□□ 1.27
SBF1-203ENST00000399627 PDE8AO60658 829 aa22.98■■□□□ 1.27
SBF1-203ENST00000399627 HSP90B1P14625 803 aaKnown RBP22.98■■□□□ 1.27
SBF1-203ENST00000399627 PRPF40BQ6NWY9 871 aaKnown RBP22.98■■□□□ 1.27
SBF1-203ENST00000399627 ATF7IPQ6VMQ6 1270 aa22.98■■□□□ 1.27
SBF1-203ENST00000399627 RBM17Q96I25 401 aaKnown RBP22.98■■□□□ 1.27
SBF1-203ENST00000399627 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
SBF1-203ENST00000399627 TNNQ9UQP3 1299 aa22.98■■□□□ 1.27
SBF1-203ENST00000399627 TRIM27P14373 513 aa22.97■■□□□ 1.27
SBF1-203ENST00000399627 ALDH1B1P30837 517 aa22.97■■□□□ 1.27
SBF1-203ENST00000399627 SF3B3Q15393 1217 aaKnown RBP22.97■■□□□ 1.27
SBF1-203ENST00000399627 CRAMP1Q96RY5 1269 aa22.97■■□□□ 1.27
SBF1-203ENST00000399627 C9orf78Q9NZ63 289 aaPredicted RBP22.97■■□□□ 1.27
SBF1-203ENST00000399627 GRM8O00222 908 aa22.96■■□□□ 1.27
SBF1-203ENST00000399627 ZKSCAN2Q63HK3 967 aa22.96■■□□□ 1.27
SBF1-203ENST00000399627 ZNF219Q9P2Y4 722 aaPredicted RBP22.96■■□□□ 1.27
SBF1-203ENST00000399627 ABCC4O15439 1325 aa22.95■■□□□ 1.26
SBF1-203ENST00000399627 CCT4P50991 539 aaKnown RBP22.95■■□□□ 1.26
SBF1-203ENST00000399627 CHD4Q14839 1912 aa22.94■■□□□ 1.26
SBF1-203ENST00000399627 C21orf2O43822 256 aa22.94■■□□□ 1.26
SBF1-203ENST00000399627 DDX46Q7L014 1031 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms